NNAACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGATCCG
CGGAATTCATTTAACACAATAAAAAATTTGAATTAATAATCATTATAATT
ACTATTATTCACAAAGAACTCAAGGAAGTAAGTATCAATTAACCAAATAA
TCCAGTTTTGAAAATAAGGTACCTATCTAAACAGAATTCTCAATAGAGGA
ATCTCAAATGGCTGAGGAACACTGAGAGAAATGTTCAACATCCTTAGCCA
TTAGGGAAATGCAAATCAAATGCAAAACTTCGAGATTCCATCCTACACCT
GTCAAAATGTTTAAGACCAAAAACACAAGTGACAGCTCAAGAATGTGGAA
CAAGAGGAGCATTCCTCCATTTGCTGGTTGGAATGCAAACTTGAACAGAC
ACTATAGGAAATCAATATGGTAGTTTCTCAGAAAATTTGGAATTAATATA
TTTTAAGACCCAGCTTTACCACTCTTGGCCATTTACCCAAAAGACAATCC
ATCCTACAACCAAAACGTTTGCTCAACTATGTTCACAGAGGCTTTATTCA
TAATAACCAGAAGCTGGAACCAATCCAGATGACTCTCAGTTGAAGAAAGG
ATAAAGAAAATGTGGTACATTTACACAGTGGAATATTACTTAGCTTTTAG
AACAAAACAACATCATGAAATTTTCAGCCAAATGGATGGAACTAGAAAAA
TTATTCTGAGGGAGGCAACCTAGACCCAGAAAAACAAACATGGCATGTCC
TCATTAGTGGGTGTAAAGAATAATCACAC

NNCCCAATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCACTCGGGCCAGAGATGAGCC
TATGTGTATAAAACAGCATAGCGACCCCTGCAGGTAAACCGAACACAGCC
AGAGTAATCTGGGGAACAGTGCTCATTGCACAGTCCATGCTGAACTCCAA
AGTGGCTTGACTAGGAAAAGGTTGTTGGGTACAGAACTCATGTGATCCTG
AACCTTTCATGGATTAAACTAAAGAAATGCAAATAAATAGGTGGTGGCGA
CACCTTTAATCCTAGCACTTGGGAGGCAGAGGCAGGTGGATCCCTGAGTG
TGAGGTGATCCTGATCTACAAAGTGAGTTCCAGAACAGCCAAGGCTATTC
AACAGAGAAACCATGTCTTGGTAGAGGAGGAAGAAAAGACAGTGGATTTG
TGCTCGTGTTTGTTTGTTTTTTAAAATTTTTTTGTTTTGTTTTGTTTTGT
TTTGTTTTGTTTTGTTTTGTTTTGTTTTTCGAGACAGGGTTTCTCTGTGC
AGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACT
CAGGTGTGCGCCACCACACCCGGCGTTTGTTTTTTAAAGATACCTTATAT
TTGAATTTTCAATAACAAGTATAAGCTCCCAAAATAAATTTATCATAGGA
CTTANACATTGATCACACATTCTTTCACCTACATGATGCTTCCTATGTTT
GTTAGATATGTTAAGTATATGGG

Query= MSMg01no515_f19.g1 MSMg01no515_f19.g1 CHROMAT_FILE:
MSMg01no515_f19.g1 PHD_FILE: MSMg01no515_f19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:39 2005
         (617 letters)



>mm_chr6_65007095_65008111
          Length = 1017

 Score = 1081 bits (559), Expect = 0.0
 Identities = 597/621 (96%), Gaps = 19/621 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   cactcgggccagagatgagcctatgtgtataaaacagcatagcgacccctgcaggtaaac 60
           ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 cactccggccagagatgagcctatgtgtataaaacagcacagcgacccctgcaggtaaac 260

                                                                       
Query: 61  cgaacacagccagagtaatctggggaacagtgctcattgcacagtccatgctgaactcca 120
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 cgaacacagccagagtaatctggggaacagtgctcagtgcacagtccatgctgaactcca 320

                                                                       
Query: 121 aagtggcttgactaggaaaaggttgttgggtacagaactcatgtgatcctgaacctttca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagtggcttgactaggaaaaggttgttgggtacagaactcatgtgatcctgaacctttca 380

                                                                       
Query: 181 tggattaaactaaagaaatgcaaataaataggtggtggcgacacctttaatcctagcact 240
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 tggattaaactaaagaaatgcaaataaataggtggtggagacacctttaatcctagcact 440

                                                                       
Query: 241 tgggaggcagaggcaggtggatccctgagtgtgaggtgatcctgatctacaaagtgagtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgggaggcagaggcaggtggatccctgagtgtgaggtgatcctgatctacaaagtgagtt 500

                                                                       
Query: 301 ccagaacagccaaggctattcaacagagaaaccatgtcttggtagaggaggaagaaaaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccagaacagccaaggctattcaacagagaaaccatgtcttggtagaggaggaagaaaaga 560

                                                                       
Query: 361 cagtggatttgtgctcgtgtttgtttgttttttaaaatttttttgttttgttttgttttg 420
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caatggatttgtgctcgtgtttgtttgttttttaaaatttttttgttttgttttgttttg 620

                                                                       
Query: 421 ttttgttttgttttgttttgttttgtttttcgagacagggtttctctgtgcagccctggc 480
           ||||||||||||||               |||||||||||||||||||||||||||||||
Sbjct: 621 ttttgttttgtttt---------------tcgagacagggtttctctgtgcagccctggc 665

                                                                       
Query: 481 tgtcctggaactcactctgtagaccaggctggcctcgaactcaggtgtgcgccaccacac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 tgtcctggaactcactctgtagaccaggctggcctcgaactcaggtgtgcgccaccacac 725

                                                                       
Query: 541 ccggc----gtttgttttttaaagataccttatatttgaattttcaataacaagtataag 596
           |||||    |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 ccggcatttgtttgttttttaaagataccttatatttgaattttcaataacaagtataag 785

                                
Query: 597 ctcccaaaataaatttatcat 617
           |||||||||||||||||||||
Sbjct: 786 ctcccaaaataaatttatcat 806


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space:   611249
Effective search space used:   611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)