Query= MSMg01no516_c19.b1 MSMg01no516_c19.b1 CHROMAT_FILE:
MSMg01no516_c19.b1 PHD_FILE: MSMg01no516_c19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:47 2005
(639 letters)
>mm_chr6_46195484_46196523
Length = 1040
Score = 1172 bits (606), Expect = 0.0
Identities = 627/634 (98%), Gaps = 1/634 (0%)
Strand = Plus / Plus
Query: 7 gaattcagag-aaattacaaaaagtagcactcttgatacataacctttgttgcagagtat 65
|||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcagagaaaacaacaaaaagtagcactcttgatacataacctttgttgcagagtat 266
Query: 66 taccctcatgacgtgagagcagggagagaatcatcagctatacaggaaactgccctgaaa 125
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 267 taccctcatgacgtgagagcagggagagaatcatcagctatacaggaaacggccctgaaa 326
Query: 126 gctggaaacctgaaacaagcccaaggttgcaagaaatctgctgtgcatagagttcccaga 185
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gctgggaacctgaaacaagcccaaggttgcaagaaatctgctgtgcatagagttcccaga 386
Query: 186 aaacagctaacacccaccacatgcccaggagtccagtgcttgcaaaatcagacaatttga 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aaacagctaacacccaccacatgcccaggagtccagtgcttgcaaaatcagacaatttga 446
Query: 246 tttattttatacccagtagtttaaaaaagtagtttatccagcaagggtttctgggagtag 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tttattttatacccagtagtttaaaaaagtagtttatccagcaagggtttctgggagtag 506
Query: 306 aaagccattcccttctaccttcctactttcagctacaaaaatggctctcagactctgctc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 aaagccattcccttctaccttcctactttcagctacaaaaatggctctcagactctgctc 566
Query: 366 tgctctctccagcacctgctatgatggtatctggtgttggggcaccagctctctgattaa 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 567 tgctctctccagcacctgctatgatggtatctggtgttggggcaccagctctctgatgaa 626
Query: 426 agaaaactggtgaaggtcaaactgagtttttattctttatttcccctgctcatatatttt 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 agaaaactggtgaaggtcaaactgagtttttattctttatttcccctgctcatatatttt 686
Query: 486 atttttctcacagaggagacctacatgtttaagtagaccagatactatttctaaggtctc 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 atttttctcacagaggagacctacatgtttaagtagaccagatactatttctaaggtctc 746
Query: 546 tgaaatagacagtttcctggagatgttttcttgtgtaggtgattggcaggtcaacttaga 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 tgaaatagacagtttcctggagatgttttcttgtgtaggtgattggcaggtcaacttaga 806
Query: 606 gtgaggggacaattatatcttcattctgtgccag 639
|||||||||||||||||||||| |||||||||||
Sbjct: 807 gtgaggggacaattatatcttcgttctgtgccag 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1040
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1030
Effective search space: 647870
Effective search space used: 647870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no516_c19.g1 MSMg01no516_c19.g1 CHROMAT_FILE:
MSMg01no516_c19.g1 PHD_FILE: MSMg01no516_c19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:48 2005
(667 letters)
>mm_chr6_46326889_46327955
Length = 1067
Score = 1243 bits (643), Expect = 0.0
Identities = 661/667 (99%)
Strand = Plus / Minus
Query: 1 caacttgctgagcttattgtagaaacataacgtgtagcattgcgagatggtcattcacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 caacttgctgagcttattgtagaaacataacgtgtagcattgcgagatggtcattcacca 808
Query: 61 actacatatattaagtttcaactggtgctggactcccaataaaacagaatgttctggaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 actacatatattaagtttcaactggtgctggactcccaataaaacagaatgttctggaat 748
Query: 121 cccagttaagttgtaagactctacatcttataaatggaaattaaagttataatgacatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 cccagttaagttgtaagactctacatcttataaatggaaattaaagttataatgacatgg 688
Query: 181 agactaaggaaggtatagagaagaggtgacaggtatctacaagactgaatataatgggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 agactaaggaaggtatagagaagaggtgacaggtatctacaagactgaatataatgggag 628
Query: 241 tccctcacattcttagtctggcctttgagaaaaaaacataatgttgaaacccatcactca 300
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 627 tccctcacattcttagtctggcctttgagaaataaccataatgttgaaacccatcactca 568
Query: 301 tgttcctaagcctctcccacatacatgtcctctacattgacattgcttaatgtcactctc 360
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 567 tgttcctaagcctctcccacatacatgtactctacattgacattgcttaatgtcactctc 508
Query: 361 tctctctctctcacatgacatctttctatgagggaggtaatagtaggcatctaagtttcc 420
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tctctctctctctcatgacatctttctatgagggaggtaatagtaggcatctaagtttcc 448
Query: 421 tgtggctagatcttgctgaagggaaagaatttgcctgacctgggattgtctggtatgacc 480
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 447 tgtggctagatcttgctgaagggaaagaatttgcctgacctgggattgcctggtatgacc 388
Query: 481 tatacagacttgcatccatggccactgcttttgagggtctataatatgaatgatgattat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tatacagacttgcatccatggccactgcttttgagggtctataatatgaatgatgattat 328
Query: 541 acattttaaattgcataagcatataagacccagccgaaaaactattgtttccatcatacc 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 327 acattttaaattgcataagcatataagacccagccgaaaaactattgtttccatcacacc 268
Query: 601 taaggaggaggcaaggactaagtctcttaacaagacaacatgcattcttcccttaaaatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 taaggaggaggcaaggactaagtctcttaacaagacaacatgcattcttcccttaaaatg 208
Query: 661 tcacaag 667
|||||||
Sbjct: 207 tcacaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
