GGGATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTATACCCAATCTAGATGCACTTAAGGAAAGTAATGAAAAAGATG
GAACTTTTAATAAAATCTGGGCTTGGGTTCAGCTGTACCTCATGAAAGCT
ACAAAGGAAAATACAACTAAATGTCCTTGTATTTCACAGTCATTTTCTCT
ATATTCCAAACACACACACACACCTTTAAATTTGGGTGTAATCTGTTTTA
TTCTTTTATTTTTAGAGATCAGTTCTTTATGCTCAATATCTGAATCCAAT
CTGGTCTTTTATTTCAAGTTTCATACTGGTTAATGGAATCTCTGTGGCCT
ATTTTAGATTCTTTTTTTTTTTTTAAGGTATTTTCTTCATTGACATTTCC
AGTGCTTTCCCAAAAGTCCCCCATACCCTCCCCCACCCACTCCCCTACCC
ATGCACTCCCCTTCTTGGCCCTGGCGTTCCCCTATACTGAGGCATATAAA
GTTTGCATGACCAATGGGCCTTCTTTCCACAGATGGCCGACTAGACCAAC
TTTTGATTCATATGCAGCTAGAGACATGAGCTCCGGGGGGTACTGGTTAG
TTCATATTGTTGTTCCATCTATAGGGTTGCAGATCCCTTTAGCTCCTTGG
GTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAATAGCT
AACTGTGAGCATCCACTTATGTGTTTGCTAGACCCTGGCATA

NNNNNCCGATGATATGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAAT
GGCAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAA
TGCAAATCAAAACAACACTGAGATTCCACTTCCCTCCAGTCAGAATAGCT
AAGATCAAAAACTCAGGTGACAGCAGATGCTGGCAAGGATGTGGAGAAAG
GGGAACACTCCTCCATTGTTGGTGGGATTACAAGCTTGTACAACCACTCT
GGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACGGCAG
GATCCCGCAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCGG
TAAGAAGAACACATGCTCCATTATGCTCATAGCAGCCTTGTTTATAATAG
CCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAG
AAAATGTGGTACATTTACACAATGGAATACTACTCAGCTATTAAAAAAAA
TGAATTTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGTATCATCC
TGAGTGAAGTAACCCAATCACAAAGGAACTTACATAATATGTACTCACTG
ATAAGTGGATATTAGCCCAGAAACTTAGGATACCCAAGATATAAGATACA
ACTTGCCAAACGCATGAAATTCAAGAAGAACAAAGACCAAAGTGG

Query= MSMg01no521_p24.b1 MSMg01no521_p24.b1 CHROMAT_FILE:
MSMg01no521_p24.b1 PHD_FILE: MSMg01no521_p24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:29 2005
         (673 letters)



>mm_chr6_24991232_24992304
          Length = 1073

 Score = 1172 bits (606), Expect = 0.0
 Identities = 654/672 (97%), Gaps = 6/672 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattatacccaatctagatgcacttaaggaaagtaatgaaaaagatggaacttttaat 63
           |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 204 ggaattatacccaatcaagatgcacttaaggaaagtaataaaaaagatggaacttttaat 263

                                                                       
Query: 64  aaaatctgggcttgggttcagctgtacctcatgaaagctacaaaggaaaatacaactaaa 123
           ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 264 aaaatctgggcttaggttcagctgtacctcatgaaagctacaaaggaacatacaactaaa 323

                                                                       
Query: 124 tgtccttgtatttcacagtcattttctctatattccaaacacacacacacacctttaaat 183
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 324 tgtccttgtatttcacagtcattttctctatattacaaacacacacacacacctttaaat 383

                                                                       
Query: 184 ttgggtgtaatctgttttattcttttatttttagagatcagttctttatgctcaatatct 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttgggtgtaatctgttttattcttttatttttagagatcagttctttatgctcaatatct 443

                                                                       
Query: 244 gaatccaatctggtcttttatttcaagtttcatactggttaatggaatctctgtggccta 303
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 444 gaatccaatctggtcttttatttcaagtttcatactgggtaatggaatctctgtggccta 503

                                                                       
Query: 304 ttttagattctttttttttttttaaggtattttcttcattgacatttccagtgctttccc 363
           |||||||||||||||||||    |||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttttagattcttttttttt----aaggtattttcttcattgacatttccagtgctttccc 559

                                                                       
Query: 364 aaaagtcccccataccctcccccacccactcccctacccatgcactccccttcttggccc 423
           |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 560 aaaagtcccccataccctcccccacccactcccctacccacgcactccccttcttggctc 619

                                                                       
Query: 424 tggcgttcccctatactgaggcatataaagtttgcatgaccaatgggcct-tctttccac 482
           |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||
Sbjct: 620 tggcgttcccctatactgaggcatataaagtttgcatgattaatgggcctctctttccac 679

                                                                       
Query: 483 agatggccgactagaccaacttttgattcatatgcagctagagacatgagctccgggggg 542
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 680 agatggccgactagaccaacttttgattcatatgcagcttgagacatgagctctgggggg 739

                                                                       
Query: 543 -tactggttagttcatattgttgttccatctatagggttgcagatccctttagctccttg 601
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gtactggttagttcatattgttgttccatctatagggttgcagatccctttagctccttg 799

                                                                       
Query: 602 ggtactttctctagctcctccattgggggccctgtgatccatccaatagctaactgtgag 661
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ggtactttctctagctcctccattgggggccctgtgatccatccaatagctaactgtgag 859

                       
Query: 662 catccacttatg 673
           ||||||||||||
Sbjct: 860 catccacttatg 871


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space:   704769
Effective search space used:   704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)