Query= MSMg01no522_i05.b1 MSMg01no522_i05.b1 CHROMAT_FILE:
MSMg01no522_i05.b1 PHD_FILE: MSMg01no522_i05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:07 2005
(625 letters)
>mm_chr6_134160112_134161136
Length = 1025
Score = 1073 bits (555), Expect = 0.0
Identities = 597/621 (96%), Gaps = 17/621 (2%)
Strand = Plus / Minus
Query: 5 gaattcctggccctcctgcctctacctcccaaggcctgaaattacaggcacgatctgcca 64
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 gaattcctggccctcctgcttctacctcccaaggcctgaaattacaggcacgatctgcca 644
Query: 65 tgcctattttatagctaagaatactgtgagttctgaaaggagatccctgtctttggagcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 tgcctattttatagctaagaatactgtgagttctgaaaggagatccctgtctttggagcc 584
Query: 125 tggagttaaagccctttcttgtggcctctgcgtgcggcttctgctctggtgaggtctctc 184
|||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 583 tggagttaaagccctttcttgtggcc-------------tctgctctggtgaggtctctc 537
Query: 185 atcagccagctgtttatcaaagcccaccgtccactcttacttcttaacaagtatggctga 244
| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 accaggcagctgtttatcaaagcccaccgtccactcttacttcttaacaagtatggctga 477
Query: 245 cttggtagggaacactaggaactaccaccagtcaacttagaaaataaaatgcaaagtcca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cttggtagggaacactaggaactaccaccagtcaacttagaaaataaaatgcaaagtcca 417
Query: 305 cttccactgtttctgtgacctactagcgtggacactatcaataactgaacggtccccaaa 364
||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 416 cttccaccgtttctgtgacctactagcgtggacgctatcaacaactgaacggtccccaaa 357
Query: 365 gataccctcacacagtgacccctggagcctgtgcatgggaacttttatgagaaacatgtt 424
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gataccctcacacggtgacccctggagcctgtgcatgggaacttttatgagaaacatgtt 297
Query: 425 tgcagacataacttaaggatcttgagacgaggtcacgagggttcttcagggaccacgact 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tgcagacataacttaaggatcttgagacgaggtcacgagggttcttcagggaccacgact 237
Query: 485 ccagtgtccagtgtcaagtatccttataagggaacagaggacaggaaggaggtgtggcca 544
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 236 ccagtgtccagtgtcaagtatccttataagggaacagaggac----aggaggtgtggcca 181
Query: 545 cgtccagactcaagtgttctgcaggactgggcttgcttttgagtttctttgcacgggatc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 cgtccagactcaagtgttctgcaggactgggcttgcttttgagtttctttgcacgggatc 121
Query: 605 ttttttacccacatgatgaaa 625
|||||||||||||||||||||
Sbjct: 120 ttttttacccacatgatgaaa 100
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no522_i05.g1 MSMg01no522_i05.g1 CHROMAT_FILE:
MSMg01no522_i05.g1 PHD_FILE: MSMg01no522_i05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:07 2005
(659 letters)
>mm_chr6_134122986_134124043
Length = 1058
Score = 1199 bits (620), Expect = 0.0
Identities = 649/659 (98%), Gaps = 1/659 (0%)
Strand = Plus / Plus
Query: 1 tttagcagaccttccgtgctcatatagaggggcttgatgctttattcttttgagatagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttagcagaccttccgtgctcatatagaggggcttgatgctttattcttttgagatagtc 260
Query: 61 tggttgtgtggcccagtctgactctgctactcacgaatagaccaagatgactttgaactt 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagttgtgtggcccagtctgactctgctactcacgaatagaccaagatgactttgaactt 320
Query: 121 gcggcagccttcctgccccaacctccccagtgctgggattccaggtgtgtgccaccacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcggcagccttcctgccccaacctccccagtgctgggattccaggtgtgtgccaccacac 380
Query: 181 ctgtcttgctagtgatagtgaacgtgtttgtgcatccggagtcaggacacgggttttcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtcttgctagtgatagtgaacgtgtttgtgcatccggagtcaggacacgggttttcac 440
Query: 241 tccttgcgcgaaggcagctggaagaggaagtggaacaccctgggtctgtgactgctcacg 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 tccttgcacgaaggcagctggaagaggaagtggaacaccctgggtctgtgactgctcgcg 500
Query: 301 actcttcgggaataggattgcagtgataacttgcctgagtctaggccctgctgcagcatc 360
||||||| |||||||||||||||||| |||||||||| ||||||||| ||||||||||||
Sbjct: 501 actcttctggaataggattgcagtgacaacttgcctgtgtctaggcc-tgctgcagcatc 559
Query: 361 tctctggcttgggaagagctgtgaggggaaggatgatctcagaggggagtggctcatgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tctctggcttgggaagagctgtgaggggaaggatgatctcagaggggagtggctcatgtt 619
Query: 421 cagagaacagataccagaccttctagaactctccctgtacagatgaccccattctccact 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gagagaacagataccagaccttctagaactctccctgtacagatgaccccattctccact 679
Query: 481 tcctggaagtcctgggtgtctcctcctctgattcacgccctctttgactgacactgatgc 540
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tcccggaagtcctgggtgtctcctcctctgattcacgccctctttgactgacactgatgc 739
Query: 541 caggatcacccgcttgagtgacctgaatgangccaaaaggtgttagtattcccaggaacc 600
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 740 caggatcacccgcttgagtgacctgaatgaggccaaaaggtgttagtattcccaggaacc 799
Query: 601 ctaggagactggaacagaaaggagagtggaggcagaagctagcttctctactctgaatt 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ctaggagactggaacagaaaggagagtggaggcagaagctagcttctctactctgaatt 858
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1058
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1048
Effective search space: 680152
Effective search space used: 680152
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
