Query= MSMg01no523_h02.b1 MSMg01no523_h02.b1 CHROMAT_FILE:
MSMg01no523_h02.b1 PHD_FILE: MSMg01no523_h02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:21 2005
(657 letters)
>mm_chr6_19590335_19591387
Length = 1053
Score = 1220 bits (631), Expect = 0.0
Identities = 649/657 (98%), Gaps = 4/657 (0%)
Strand = Plus / Minus
Query: 1 atgtgttctacacaagatactatctgtcagaaagacaatatattttcaaattgtactgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 atgtgttctacacaagatactatctgtcagaaagacaatatattttcaaattgtactgtt 966
Query: 61 ttcttggtcacaatgttaaagttatagataaattagtaatctcatttttatgaccttgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 ttcttggtcacaatgttaaagttatagataaattagtaatctcatttttatgaccttgtc 906
Query: 121 tatataacacattttttatctctatattataagatatataaattatttttatcagagtag 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 tatataacacattttttatttctatattataagatatataaattatttttatcagagtag 846
Query: 181 ataaaaaaatgcatatagtaagttattcatagctctctgagatgctttttctctgtttgt 240
||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 845 ataaacaaatgcatttagtaagttattcatagctctctgagatgctttttctc----tgt 790
Query: 241 tttacatccttacttgtgtcaagaaagcaatattaaactttcacttgttttcatacagaa 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 tttacatccttacttgtatcaagaaagcaatattaaactttcacttgttttcatacagaa 730
Query: 301 aacccaaattttaccattttctttgggcttctatattaaaaaataagaaagttaaactct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 aacccaaattttaccattttctttgggcttctatattaaaaaataagaaagttaaactct 670
Query: 361 caaagttttaaaaccagttgcctctgccttctagaactctacataatttgcaactctcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 caaagttttaaaaccagttgcctctgccttctagaactctacataatttgcaactctcta 610
Query: 421 tcaaatatttccacttaagtatcaactagtagagccaatttaatgtgctgcaaaggaaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tcaaatatttccacttaagtatcaactagtagagccaatttaatgtgctgcaaaggaaag 550
Query: 481 ctgtttttgttgttgctggttctatcttgttttgcccattctaataatttgcactgccat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ctgtttttgttgttgctggttctatcttgttttgcccattctaataatttgcactgccat 490
Query: 541 cttaagtatattcaaccctcagatcttgatttcatctttctgttttgacttttcacactg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 cttaagtatattcaaccctcagatcttgatttcatctttctgttttgacttttcacactg 430
Query: 601 cacctaatatatccaataaatcatgctaatttggttcaaaagaatttgactttacct 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cacctaatatatccaataaatcatgctaatttggttcaaaagaatttgactttacct 373
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1053
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1043
Effective search space: 674821
Effective search space used: 674821
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_h02.g1 MSMg01no523_h02.g1 CHROMAT_FILE:
MSMg01no523_h02.g1 PHD_FILE: MSMg01no523_h02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:21 2005
(645 letters)
>mm_chr6_19420875_19421919
Length = 1045
Score = 1181 bits (611), Expect = 0.0
Identities = 636/645 (98%), Gaps = 2/645 (0%)
Strand = Plus / Plus
Query: 1 tatcccaggtggttcctttagaccttctgtgtttgtattcctctgttttatgtaagaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tatcccaggtggttcctttagaccttctgtgtttgtattcctctgttttatgtaagaatc 262
Query: 61 cagtaacctctttgtaccttgctggtgtgtcacccaacttccttattttcttctgtataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cagtaacctctttgtaccttgctggtgtgtcacccaacttccttattttcttctgtat-- 320
Query: 121 aaagtttgacactcgatttgacaaattacattcagattctacacaacctctcttgtgtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaagtttgacactcgatttgacaaattacattcagattctacacaacctctcttgtgtgc 380
Query: 181 atctgtctgtcaattcatcaaacactttgcccacctgcgactagagacccgttccatgca 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 atctgtctgtcaattcatccaacactttgcccacctgcgactagagacccgttccttgca 440
Query: 241 gacaaaggggctcagagggtctgcggcagatttccttgttcatcttcctgatgtagattt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 gacaaaggggctcagagggtctgcggcagatttccttgttcatcttcctgatgtggattt 500
Query: 301 tatctaaaaacactgaataataaatgctttgagttgcattcatgtcttcaaatatacatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatctaaaaacactgaataataaatgctttgagttgcattcatgtcttcaaatatacatt 560
Query: 361 tagtatttataccaatatatagatcttattttgaaagcatatggtagtatttcaggtagt 420
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 561 tagtatttataccaatatatagatcttattttaaaagcatatggtagtatttcaggtagt 620
Query: 421 attttcagttaccatatacacagaattttcatcaaaaagacttaggaaataaaaatatgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attttcagttaccatatacacagaattttcatcaaaaagacttaggaaataaaaatatgt 680
Query: 481 gttgggtgactattagtcaaaaataggaaagttaagacataaatggtagacatgcctaat 540
|||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 681 gttgggagactattagtcaaaaatagaaaagttaagacataaatggtagacatgcctaat 740
Query: 541 agaagaaaattgaacccaactgagactcactgtgtagctttccattctcaggtaaacctt 600
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 741 agaagaaaattgaacccaactgagacttactgtgtagctttccattctcaggtaaacctt 800
Query: 601 ccaaacataaaaatgggtttaaataattctctatacagacataac 645
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ccaaacataaaaatgggtttaaataattctctatacagacataac 845
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
