Query= MSMg01no523_n03.b1 MSMg01no523_n03.b1 CHROMAT_FILE:
MSMg01no523_n03.b1 PHD_FILE: MSMg01no523_n03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:52 2005
(693 letters)
>mm_chr6_109978125_109979217
Length = 1093
Score = 625 bits (323), Expect = 0.0
Identities = 354/365 (96%), Gaps = 2/365 (0%)
Strand = Plus / Minus
Query: 330 gccatcacccatttttaacagaggcttctctgaccaaggctgagagctgtactaagtgga 389
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1064 gccatcacccatttttaacagaggcttctctgaccaaggctgagagctgtactaagggga 1005
Query: 390 cagcattgttacctccccagtggacactggtattcctttcctacgactgggaatctgctt 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1004 cagcattgttacctccccagtggacactggtattcctttcctacgactgggaatctgctt 945
Query: 450 tttctatttttctttttttttctttcttttttcttttacttc--ttttttttattctcct 507
||||||||||||||||| ||||||||||||| ||||| |||| ||||||||||||||||
Sbjct: 944 tttctatttttctttttctttctttctttttacttttgcttcttttttttttattctcct 885
Query: 508 gccatttgcttcatttcctctttcacaagatgtagaaatcagaaagcatttatcaacatc 567
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 884 accatttgcttcatttcctctttcacaagatgtagaaatcagaaaacatttatcaacatc 825
Query: 568 aagctatttttataatctaatttcatacacagatgcattcacatgctagtgtctgaaaca 627
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 824 aagctatttttataatctaatttcatacacaaatgcactcacatgctagtgtctgaaaca 765
Query: 628 aacactctccatgggtttaccaagcaccattgcttcttgacaagttaaggaagaaaccac 687
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 aacactctccatgggtttaccaagcaccattgcttcttgacaagttaaggaagaaaccat 705
Query: 688 acctg 692
|||||
Sbjct: 704 acctg 700
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1093
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1083
Effective search space: 739689
Effective search space used: 739689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_n03.g1 MSMg01no523_n03.g1 CHROMAT_FILE:
MSMg01no523_n03.g1 PHD_FILE: MSMg01no523_n03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:52 2005
(640 letters)
>mm_chr6_109805240_109806279
Length = 1040
Score = 1191 bits (616), Expect = 0.0
Identities = 634/640 (99%)
Strand = Plus / Plus
Query: 1 actttcaatgcagatagacctcttgcatctgagactgaaatgcctcatcttaaactgggg 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 actttcaatgcagatagacctcttgcatctgagactgaaatgtctcatcttaaactgggg 260
Query: 61 ccattgcatttctgagacatttgtgtgtactgcatttggcaatgcatgtaacataaacac 120
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 261 ccattgcatttctgagacatttgtgtgtactgcatttgacaatgtatgtaacataaacac 320
Query: 121 taatccatggaactgtctccaaaaatagtaactctgtttcaagcctttaatggattcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taatccatggaactgtctccaaaaatagtaactctgtttcaagcctttaatggattcatt 380
Query: 181 gtaatggcatgagtcttttaaatagaacaaatgaagtcaacaaattagctcaatataaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaatggcatgagtcttttaaatagaacaaatgaagtcaacaaattagctcaatataaaa 440
Query: 241 ttggtttggaaacaggcctgggattatttcatgttcctatgatcatggccttcccttctg 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgggtttggaaacaggcctgggattatttcatgttcctatgatcatggccttcccttctg 500
Query: 301 atctgttccttcatatagactttcctgtgagtgagcaaaataatgatgttgggctgtcca 360
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 501 atctgttccttcatgtagactttcctgtgagtgagcaaaataatgatgttgggttgtcca 560
Query: 361 ggcaagcccttatgatgttgttggcccagtaaagatagtgacaactctatttctccattg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggcaagcccttatgatgttgttggcccagtaaagatagtgacaactctatttctccattg 620
Query: 421 tttgttcaattcatccttgcaatgcccaggaaataaatgtctagggaggagagacagaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttgttcaattcatccttgcaatgcccaggaaataaatgtctagggaggagagacagaca 680
Query: 481 tgaggcacaatggctgaagctgacctcaagttaatgggatttgggctctttgaaagaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgaggcacaatggctgaagctgacctcaagttaatgggatttgggctctttgaaagaaaa 740
Query: 541 cacattgccaggggagaggtgcaagctgtacacagcagcgaggccatctggtttacttca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cacattgccaggggagaggtgcaagctgtacacagcagcgaggccatctggtttacttca 800
Query: 601 catgttcttcagttctcattttgtcaacaaagagagaatg 640
||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 catgttcttcagttctcattttgtcaacaaagagagaatg 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
