CCCCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTCAGCTTCTGATCAGCACCAGCACCAGGGTACCTTGGATGCA
GAGTCGGCGGACACCCCCAAGGTACCCTAGAGGATTCTCCACGCAATCTT
AGGATCACCCATGAGTGGACCACAACTTCAATTCCAATCCAATTGCGAAG
GACCTGAGACAGCATTAGAGAAGCAGGAAACCCGGACTGACCAGGGTCAC
AAGACCCTTCCGGTCAGCGCCAAAACTTGGTCACCTGGGCAGAGAGTCAG
TGGAAACCCCCAAGATCCCTAGATGACAACTTCTGAGACAGACCCCATTT
TGGAGTCCAGACATCCAGGCACCTCCCCTGCCAGAGGAGAGGTGTCCACC
CTGCCTGGGAGGGCTTTGCTGGAGCACCTGGGGGAGCCATCTTAGTTCCC
GGATGCGTCTGAGACTAGTCTGAGCAAGTGAGAGTGTAGCTACAGAAGCT
AACAGCTTCTGGGACAGGCCAAAGCAACACAGCTTCTGGGACAGGTCCTG
TTTTCAGGCCTTTATCTTCTGCCAGGAGGAAGGTCCAAACACCAGATATC
TGTGAACCTTCCCTGTAAGAAAAGAGCTTGCCTGCAAAGTGTGCTCTGAC
CACTGAAACAGAGGAAAGAGCTAGTCTCCCAGTTCTGCTGATAAAGGCTA
ACATAATCACCAGAGGAATAATCTCTTAACTGAAGCGACTATA

GTCCGCGGAATTCATACAACTATCTCAACCCCAGTGTCATCATTGTTTTT
CTCTGGTTTCCCTTTTGCCTTAAGCAATAAAAGGATTAATTCTTTATAGT
AATTTAAATAGAATTACTTGTTAAAAATCCCCTACCAAGATCAGTAAAAA
GGGATTAATTTTAAGCTGCCTTAATCATAATATTTTCAAAAGAGAGAGTA
TAAAGGAGTAAAGACGAATATAGCTTCATCTGATTTTTTTATTGTTTTCT
TCTTTTTTATTAGACATTTTCATTATTTACATTTCAAATGTTATACCCTT
TCCTAGTTTCCCCTCCTAAAATCCCCTATCCCTTCTCCCTCCCCCTGCTC
CCCAACCCACCCACTTCCTCTTTCTGGCCCCGGCATTCCCCTACACTGGA
GCATAGAACCTTCACTGGACCAAGGGCCTCTCCTCCCATTGATGACCAAC
TAGGCCATCCTCTGCTACACATGCAGCTAGAGCCATGAATCTCTCTATTA
GTTCTCTTTGGTTGGCGGTTTAGTCTCAAGGAGCTCTGGGGGTACTGGTT
AGTTCATATTTGTTGTTCCCCCTATGGGGCAACAGCTCCTTGTGGTTTTT
ATGGAAACTAAGAGCTTGTACTTGCTAGACAGGTGCTTCTCACTGCGTTA
CACCTCACCCTATTCTGGCCCTGTC

Query= MSMg01no523_o12.g1 MSMg01no523_o12.g1 CHROMAT_FILE:
MSMg01no523_o12.g1 PHD_FILE: MSMg01no523_o12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:59 2005
         (510 letters)



>mm_chr6_11568250_11569159
          Length = 910

 Score =  845 bits (437), Expect = 0.0
 Identities = 443/445 (99%), Gaps = 2/445 (0%)
 Strand = Plus / Minus

                                                                       
Query: 6   gaattc-atacaactatctcaaccccagtgtcatcattgtttttctctggtttccctttt 64
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gaattcaatacaactatctcaaccccagtgtcatcattgtttttctctggtttccctttt 385

                                                                       
Query: 65  gccttaagcaataaaaggattaattctttatagtaatttaaatagaattacttgttaaaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gccttaagcaataaaaggattaattctttatagtaatttaaatagaattacttgttaaaa 325

                                                                       
Query: 125 atcccctaccaagatcagtaaaaagggattaattttaagctgccttaatcataatatttt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atcccctaccaagatcagtaaaaagggattaattttaagctgccttaatcataatatttt 265

                                                                       
Query: 185 caaaagagagagtataaaggagtaaagacgaatatagcttcatctgatttttttattgtt 244
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 264 caaaagagagagtataaaggagtaaagacgaatatagcttcatctga-ttttttattgtt 206

                                                                       
Query: 245 ttcttcttttttattagacattttcattatttacatttcaaatgttataccctttcctag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ttcttcttttttattagacattttcattatttacatttcaaatgttataccctttcctag 146

                                                                       
Query: 305 tttcccctcctaaaatcccctatcccttctccctccccctgctccccaacccacccactt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tttcccctcctaaaatcccctatcccttctccctccccctgctccccaacccacccactt 86

                                                                       
Query: 365 cctctttctggccccggcattcccctacactggagcatagaaccttcactggaccaaggg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85  cctctttctggccccggcattcccctacactggagcatagaaccttcactggaccaaggg 26

                                    
Query: 425 cctctcctcccattgatgaccaact 449
           |||||||||||||||||||||||||
Sbjct: 25  cctctcctcccattgatgaccaact 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 910
Length adjustment: 10
Effective length of query: 500
Effective length of database: 900
Effective search space:   450000
Effective search space used:   450000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)