XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTC
ATCTGATTCAGAGCTACCAAGAGCTGGCTCCCCGAGCCCATCCAGCGATG
AGCACAGGCTCCTTTTCCTAGAGACCTCCGCTAATTGATCTTTCTTCTTT
TCCCTTTTTCCTCTTTTTCTTCTAATCTCTCTCCAGGTATTCCTACCTAA
CCTTAACTTTTCCTCGGGTTCAAGACCCTTGGAAAGGCCTGTATACTTAT
TTTGTGTACCATATTTCCTCTTTGTTCCTACTCTCTCTCCCCGCTTTACT
TCTGATAGCTTGTCCTGAATTTCCTCTAGAATTTTCAGCCCTATCTTAAT
CACTTGATAACATGTGAAAAGGAACAAAAGGGCTCCTAACACTAGAAAAA
ATTCAAGGCCAAACATTTTCCACTTTACTTCTGATAGACTGTCTTGAATT
TCCTTAGAAAGTTCAAGACCAGACTTACCTCGCAAAGCTGTACTCACTGG
TACTCTCGTTCCCCAGCTGAAAAGTTCTGAATTCATGCAGTTGAATCCTT
CTTAACAGTCTGCTTTACGGGAACCTTTATTACCGCGACCCGCAGTTCTG
GTTCTGGAATGAGGGATCTTCCCTGCGCCGGTCCCGAGTTTTCTTGTATT
TTTTCGTCCCGGATTTCAGCACCAATTTCTAATAGCGTTCGCGCGCCCGA
CGAGGAAGAACACAACAAACCAAAATCTTCTGCGGCGAAACTTTATTGCT
TACATCTTTTGGAGCCAGGAGGGCAA

ATAGTGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTTATGAATGCAGTGTTAAGACAACTCATTT
ACAAGAGTTGTATTACAATTTTCAAGACATAGCTGTTGTCATTGCAGAAG
TCCAAATAGTAGAAAAATACAAATAGTATTGCTATACATAAAATTGAATA
CTGGATGCTTCACCTCCCTTTTCAGACTTAAAGACTTAACCCCTAGCTAT
TATGAGCCCTGCTGGCCAACAATCTTTAATTGTTAGCTCTCTCCAGGAAC
TGACTCTGTTTGGAGTTGGCTCTCTTACTGTCAACATCTGCTTTCCATAG
CACACCTTTCATACTCATTGGTCTGAAGCATCAACCCTGAGGAACCACCC
TTGTGCAGTCCTAGAAGCATTGTTTTAGACTTTGGGTGACAGTGACACTG
CAGCAGCATGGCTATCTCTTGTGCCTAGTTGTTTCCTTTATTTTCATTTC
TTAGGCAAAGAACTTAGTACTCTTTTGACAGGTTAGGCTTCATCTCAGGG
CCTGCTTCTGGAAGAACCTATAACCTGACACTGTTGGCTATGGAGAGATC
CTCTAGTAAGAGAACTTATGGTCTGGTTACAGAAAGGGATGTGTGGGTAG
CTGAGAATATTACAGATGCTAGTGGATGCACAAGTCACTGAAGGTGTTAT
GGNACTCAGTGCGGCATTGCAATGGGATAGCAGCTCCCGGCTAGAAATAA
GCAAAGCAGAAAAACACAGCNACAGN

Query= MSMg01no524_j22.g1 MSMg01no524_j22.g1 CHROMAT_FILE:
MSMg01no524_j22.g1 PHD_FILE: MSMg01no524_j22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:57 2005
         (587 letters)



>mm_chr6_111982023_111983009
          Length = 987

 Score = 1120 bits (579), Expect = 0.0
 Identities = 585/587 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttatgaatgcagtgttaagacaactcatttacaagagttgtattacaattttcaagacat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 ttatgaatgcagtgttaagacaactcatttacaagagttgtattacaattttcaagacat 728

                                                                       
Query: 61  agctgttgtcattgcagaagtccaaatagtagaaaaatacaaatagtattgctatacata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 agctgttgtcattgcagaagtccaaatagtagaaaaatacaaatagtattgctatacata 668

                                                                       
Query: 121 aaattgaatactggatgcttcacctcccttttcagacttaaagacttaacccctagctat 180
           |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 aaatagaacactggatgcttcacctcccttttcagacttaaagacttaacccctagctat 608

                                                                       
Query: 181 tatgagccctgctggccaacaatctttaattgttagctctctccaggaactgactctgtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 tatgagccctgctggccaacaatctttaattgttagctctctccaggaactgactctgtt 548

                                                                       
Query: 241 tggagttggctctcttactgtcaacatctgctttccatagcacacctttcatactcattg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tggagttggctctcttactgtcaacatctgctttccatagcacacctttcatactcattg 488

                                                                       
Query: 301 gtctgaagcatcaaccctgaggaaccacccttgtgcagtcctagaagcattgttttagac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gtctgaagcatcaaccctgaggaaccacccttgtgcagtcctagaagcattgttttagac 428

                                                                       
Query: 361 tttgggtgacagtgacactgcagcagcatggctatctcttgtgcctagttgtttccttta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tttgggtgacagtgacactgcagcagcatggctatctcttgtgcctagttgtttccttta 368

                                                                       
Query: 421 ttttcatttcttaggcaaagaacttagtactcttttgacaggttaggcttcatctcaggg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ttttcatttcttaggcaaagaacttagtactcttttgacaggttaggcttcatctcaggg 308

                                                                       
Query: 481 cctgcttctggaagaacctataacctgacactgttggctatggagagatcctctagtaag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 cctgcttctggaagaacctataacctgacactgttggctatggagagatcctctagtaag 248

                                                          
Query: 541 agaacttatggtctggttacagaaagggatgtgtgggtagctgagaa 587
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 agaacttatggtctggttacagaaagggatgtgtgggtagctgagaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space:   563729
Effective search space used:   563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)