XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAAG
AGCATAAGGGGAAGTACAGGTACTTATCACTGGGAGGGGTGGGGCAATAG
AAATTTTTCTTTTGGCAGCTACAGGGGGAAGCAGGAACTTGGTGGTATCA
GGGTGTGGTCAGGACATCTGGCGCTGAATTAGGGCTGGAACATTCTGTGG
TTGTTCTCAGAATGGTGTGTCAGTGGCCCGCTTTTGACCCCAAACATTTT
TATTTTTACATTTTAAAATATCTTTTAAATAGAAGAAATACAATAATTTG
TGATTCCTAGATATAGCTATGAAATAAAAGTTTACTAGCCCTTCATAAAT
AATTTTTATGGGAACCTGGCTATGATATTTATGCATTAGCTGGGGTTGGA
TTCACACTATCATGCTGCCATATCTATTATATTTGTTTCATAGTTCATAA
AGGTACTAATACTTACTAATTGACCCTCAAACTTGTCTTGACTTGTTTTC
TCTAAATCCCTCCAAAAATTCCTCTATCTACAGAGCAAAAGGGTAGAAAT
GTACTCTATCCCAAAGCTTAGAAAGATTCTCGATTCCCCCAAGGCATACG
ATGTAGCCTTAGAGTTTTTAAACCTACTTTTAATAAGGGTTCTCAAATGC
TTCAACACCCCCACCCCCACCTCACCCTTTCTAGGTAGAAGAGAAAAGAT
GGTAAACAGGACAAGGGAAAGTGGAC

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCACACCCCTAAGTCCCTTACTCCATAAAAACCCC
TAGATTTTGAGCCTCGTGGTCGACATCCTTTATCTTCTGTGTGGGATGCA
TGTCGGTCCAGAGCTCCGTAATTAAATGACCTCATGTAATTACATAGAGA
TGGTCCTTCGTGATTTTTTGGGTGCACGCCGAATCGGGAATTGAGTGGGG
GTTTCCCCACTAGGTTCTAACAGAGAAAGCATATTACTGCGAGTTTGAAT
CTATGTCTTATTAACTATTTTCTCCTCAAAGAAAGGGGATAACATTTGAA
ATTTACATAAGGAAAATATCTAATAATATAAGGTCAAAACTATTCACAGT
TATCTCTGCTGCCTGATTGTGGATTAAGAGGTAAACTCTAATCTACTGAA
CAGCACTATGGCTCTGTGCCTGCTTGTCCACCTGCTACAATGCTCCCCAC
AAGAATGACCATAAGTTACCCTCTAAAACTGTAAGCCACTAAAAACTGTT
TCTATGTGTTTCCATAAAAAAACAAAGAAGAAGAATGAGGATGAAGAGGA
GGAGGAGGAGGAGGAGAAGGAAGAAGCATGAAGCTGTTTCTGAGTCTTAA
GAATTTCATACAGTCATTGATTTTAATAGCTTATTAGTACTCCATTTGTG
TAAATGTACCACATTTTCTGTATCCATTCCTCTG

Query= MSMg01no526_n13.b1 MSMg01no526_n13.b1 CHROMAT_FILE:
MSMg01no526_n13.b1 PHD_FILE: MSMg01no526_n13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:54 2005
         (664 letters)



>mm_chr6_109824833_109825896
          Length = 1064

 Score = 1226 bits (634), Expect = 0.0
 Identities = 651/660 (98%), Gaps = 6/660 (0%)
 Strand = Plus / Minus

                                                                        
Query: 5    gaattccaagagcataaggggaagtacaggtacttatcactgggaggggtggggcaatag 64
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 gaattccaagagcaaaaggggaagtacaggtacttatcactgggaggggtggggcaatag 948

                                                                        
Query: 65   aaatttttcttttggcagctacagggggaagcaggaacttggtggtatcagggtgtggtc 124
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947  aaatttttcttttggcagctacagggggaagcaggaacttggtggtatcagggtgtggtc 888

                                                                        
Query: 125  aggacatctggcgctgaattagggctggaacattctgtggttgttctcagaatggtgtgt 184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887  aggacatctggcgctgaattagggctggaacattctgtggttgttctcagaatggtgtgt 828

                                                                        
Query: 185  cagtggcccgcttttgaccccaaacatttttatttttacattttaaaatatcttttaaat 244
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827  cagtggcccgcttttgaccccaaacatttttatttttacattttaaaatatcttttaaat 768

                                                                        
Query: 245  agaagaaatacaataatttgtgattcctagatatagctatgaaataaaagtttactagcc 304
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767  aaaagaaatacaataatttgtgattcctagatatagctatgaaataaaagtttactagcc 708

                                                                        
Query: 305  cttcataaataatttttatgggaacctggctatgatatttatgcattagctggggttgga 364
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707  cttcataaataatttttatgggaacctggctatgatatttatgcattagctggggttgga 648

                                                                        
Query: 365  ttcacactatcatgctgccatatctattatatttgtttcatagttcataaaggtactaat 424
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647  ttcacactatcatgctgccatatctattatatttgtttcatagttcataaaggtactaat 588

                                                                        
Query: 425  acttactaattgaccctcaaacttgtcttgacttgttttctctaaatccctccaaaaatt 484
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587  acttactaattgaccctcaaacttgtcttgacttgttttctctaaatccctccaaaaatt 528

                                                                        
Query: 485  cctctatctacagagcaaaagggtagaaatgtactctatcccaaagcttagaaagattct 544
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 527  cctctatctacagagcaaaagggtagaaatgtactctatcccaaagcttagaaagagtct 468

                                                                        
Query: 545  cgattcccccaaggcatacgatgtagccttagagtttttaaacctacttttaataagggt 604
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467  cgattcccccaaggcatacgatgtagccttagagtttttaaacctacttttaataagggt 408

                                                                        
Query: 605  tctcaaatgcttcaacacccccacccccacctcaccctttctaggtagaagagaaaagat 664
            |||||||||||||||      |||||||||||||||||||||||||||||||||||||||
Sbjct: 407  tctcaaatgcttcaa------cacccccacctcaccctttctaggtagaagagaaaagat 354


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space:   689316
Effective search space used:   689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)