Query= MSMg01no526_p06.b1 MSMg01no526_p06.b1 CHROMAT_FILE:
MSMg01no526_p06.b1 PHD_FILE: MSMg01no526_p06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:02 2005
(632 letters)
>mm_chr6_49185513_49186544
Length = 1032
Score = 1185 bits (613), Expect = 0.0
Identities = 627/637 (98%), Gaps = 9/637 (1%)
Strand = Plus / Plus
Query: 5 gaattctaggcctgcccggggctacatagttaagatcctgtctcaaaaaataaaaacagg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gaattctaggcctgcccggggctacatagttaagatcctgtctcaaaaaataaaaacagg 255
Query: 65 ggctggagagatggctcagcagttaagagcact---------tctgaaggtcctgagttc 115
||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 256 ggctggagagatggctcagcagttaagagcactgactgctcttctgaaggtcctgagttc 315
Query: 116 aaatcccagcaatcacatggtgtctcacaaccatccgtaacgagatctgacaccctcttc 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aaatcccagcaatcacatggtgtctcacaaccatccgtaacgagatctgacaccctcttc 375
Query: 176 tggtgtgtctgaagacagttacagtgtacttacatataataaataaataaatctttaaaa 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tggtgtgtctgaagacagttacagtgtacttacatataataaataaataaatctttaaaa 435
Query: 236 ataaaaacagaggtatgaagactttctaaaaatgattccagtaattgtgacaatcaatcc 295
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 436 ataaaaacagaggtatgaagactttctaaaaatgattccagtaattgcgacaatcaatcc 495
Query: 296 caagaattaccaagtgaattggtagttaccatgtttatacatggagtctcatacctttaa 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 caagaattaccaagtgaattggtagttaccatgtttatacatggagtctcatacctttaa 555
Query: 356 tcccaacacgcaggaagcagcagcagggagatctctgagtttaaggccagcctggatgga 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tcccaacacgcaggaagcagcagcagggagatctctgagtttaaggccagcctggatgga 615
Query: 416 ctacttcatagaaaattccaggacaggcaggactacaggactgcacagtgagacacctgt 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ctacttcatagaaaattccaggacaggcaggactacaggactgcacagtgagacacctgt 675
Query: 476 ctttaaaacacacatacatcaaaaccaaccaaacattcaatcaataaatgagctaatgta 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 ctttaaaacacacatacatcaaaaccaaccaaacattcaatcaataaatgagctaatgta 735
Query: 536 ctcaaaatttctcaaaagaagaaatgccaataaatacttgaaaacgtataaatgctaact 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 ctcaaaatttctcaaaagaagaaatgccaataaatacttgaaaacgtataaatgctaact 795
Query: 596 aaaactgcattgtggtggctggagagatggttcactc 632
|||||||||||||||||||||||||||||||||||||
Sbjct: 796 aaaactgcattgtggtggctggagagatggttcactc 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_p06.g1 MSMg01no526_p06.g1 CHROMAT_FILE:
MSMg01no526_p06.g1 PHD_FILE: MSMg01no526_p06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:02 2005
(593 letters)
>mm_chr6_49330150_49331142
Length = 993
Score = 617 bits (319), Expect = 0.0
Identities = 328/331 (99%)
Strand = Plus / Minus
Query: 1 acttattcactctgcacctgcaatatgaaaataatatggtggctatacagaaacagacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 acttattcactctgcacctgcaatatgaaaataatatggtggctatacagaaacagacaa 272
Query: 61 gaatgaggcagaccatggagttaagagcaatctccggtttgcacccagtccagctagctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gaatgaggcagaccatggagttaagagcaatctccggtttgcacccagtccagctagctg 212
Query: 121 atgaacaagagcagtggctctcaacctcccttacactgtgacccttaaatacagttcctc 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 atgaacaagagcagtgactctcaacctcccttacactgtgacccttaaatacagttcctc 152
Query: 181 atgttgtggtgacccctgaactataaaattgtttcattgctacctcataacagtaatttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 atgttgtggtgacccctgaactataaaattgtttcattgctacctcataacagtaatttt 92
Query: 241 gctactgctatgaatgataatggacacatgcaatatgcaggatatctgacatgcaactcc 300
|||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 91 gctactgctatgaatggtaatggaaacatgcaatatgcaggatatctgacatgcaactcc 32
Query: 301 agtgggcttacaactgacagcttgagaacca 331
|||||||||||||||||||||||||||||||
Sbjct: 31 agtgggcttacaactgacagcttgagaacca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space: 573089
Effective search space used: 573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
