Query= MSMg01no527_k05.b1 MSMg01no527_k05.b1 CHROMAT_FILE:
MSMg01no527_k05.b1 PHD_FILE: MSMg01no527_k05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:57 2005
(615 letters)
>mm_chr6_8409133_8410147
Length = 1015
Score = 1174 bits (607), Expect = 0.0
Identities = 610/611 (99%)
Strand = Plus / Plus
Query: 5 gaattctgatttttctcaagctaaagttacaaaaatgtcaaaagcatgtgtgactgaaca 64
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 205 gaattctgatttttctcaagctaaagttacaaaactgtcaaaagcatgtgtgactgaaca 264
Query: 65 tgtgtctgtaagtttatgtacatttacattttatgtccctgtttaaaataaaattgtata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtgtctgtaagtttatgtacatttacattttatgtccctgtttaaaataaaattgtata 324
Query: 125 atattggtagctgacccttggtgtctcttatttacacataaagggaaatatatgcacttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atattggtagctgacccttggtgtctcttatttacacataaagggaaatatatgcacttt 384
Query: 185 gtgatcaggaacctaaattctgttgtttcatgggaagccttgtacaatgaattcaagtac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtgatcaggaacctaaattctgttgtttcatgggaagccttgtacaatgaattcaagtac 444
Query: 245 ttcctcaagataggccattagttggcgttttttattggttttctcctttctgccaagaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttcctcaagataggccattagttggcgttttttattggttttctcctttctgccaagaaa 504
Query: 305 caactgtatatacaagacacaactgatatacaaagcagaaggcagacctcagtctgatgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 caactgtatatacaagacacaactgatatacaaagcagaaggcagacctcagtctgatgg 564
Query: 365 gggtggctgtgtcctcacataaaaacatgcagtacaaggttgggagggctggacatgggg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gggtggctgtgtcctcacataaaaacatgcagtacaaggttgggagggctggacatgggg 624
Query: 425 tgggtgggcactggaggtgtatttgagagagccttgacaagagaacagggacttgccgtg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgggtgggcactggaggtgtatttgagagagccttgacaagagaacagggacttgccgtg 684
Query: 485 tagatgttcacactccagaagataagccatcaattttcatatcagtgctcttgagaggat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tagatgttcacactccagaagataagccatcaattttcatatcagtgctcttgagaggat 744
Query: 545 tttcaaaattagtatatgttcattgtacacaatggtgggtttcataaaaacactttctcg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tttcaaaattagtatatgttcattgtacacaatggtgggtttcataaaaacactttctcg 804
Query: 605 ggggctggaga 615
|||||||||||
Sbjct: 805 ggggctggaga 815
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space: 608025
Effective search space used: 608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no527_k05.g1 MSMg01no527_k05.g1 CHROMAT_FILE:
MSMg01no527_k05.g1 PHD_FILE: MSMg01no527_k05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:57 2005
(639 letters)
>mm_chr6_8531348_8532386
Length = 1039
Score = 1205 bits (623), Expect = 0.0
Identities = 635/639 (99%)
Strand = Plus / Minus
Query: 1 ttcactttatgaattcctcactaattagatcccaagaactttgtttcctttgagatcacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 839 ttcactttatgaattcctcactaattagatcccaagaactttgtttcctttgaaatcacc 780
Query: 61 taaaatatctaataagatttcattagtactcagtagagaataatgaatctcaatactgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 taaaatatctaataagatttcattagtactcagtagagaataatgaatctcaatactgct 720
Query: 121 aacatggcatatgactaagtatgactatcgatgattttgcttagtactaatgttgaaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 aacatggcatatgactaagtatgactatcgatgattttgcttagtactaatgttgaaaag 660
Query: 181 cagaaaacagaatattacaatcacaatgacaggctttgaactaggggactcactaaaatt 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 cagaaaacaggatattacaatcacaatgacaggctttgaactaggggactcactaaaatt 600
Query: 241 cattagtatgttattttgcttctataaataaagaacccatagcttagagctgatggtgac 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 599 cattagtatgttattttgcttctataaataaagaacccatagtttagagctgatggtgac 540
Query: 301 agtgtcaattaaaaatattttaaaatgcagaaaatacccaaagtaaaaaatttccaatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 agtgtcaattaaaaatattttaaaatgcagaaaatacccaaagtaaaaaatttccaatgt 480
Query: 361 tttaagttataagtttgtagataattctagaataattctgaaatgtgtatccttacaaat 420
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tttaagttttaagtttgtagataattctagaataattctgaaatgtgtatccttacaaat 420
Query: 421 taagatacaattcattttcaagaaatgttttatattgtagtaaaaagttttgccttgatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 taagatacaattcattttcaagaaatgttttatattgtagtaaaaagttttgccttgatg 360
Query: 481 tttttagtaaatagataaatttgtgagtgataatctttcaaatataagatattttatttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tttttagtaaatagataaatttgtgagtgataatctttcaaatataagatattttatttc 300
Query: 541 cttttattactattctaaagcaaacattttaacagcaaacaactaagatgtgttaacaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 cttttattactattctaaagcaaacattttaacagcaaacaactaagatgtgttaacaat 240
Query: 601 ctccattccaataaattcctttatagcattatatctata 639
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ctccattccaataaattcctttatagcattatatctata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
