CTCTTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGA
TCCGCGGAATTCCTTCTACTTCCTCCTGAGAATAAGGCTTAATTCTTCAG
TGTGATCTGTAAGATTGGTTTGGACTTTAAGGCTGAATACATAGGCTCCA
TCCACTGCTACGCGCACTGTTGACACTATTAGTGAACTGCTGGGAGGCAG
ACGTGAGGAAATAAAGGGGGAGGGAGAGATGACCCACATCCCGCCAGAGC
TTGGGGTCTCTGAGCAGACAGACACGGGAGACTGCCACTTGTTCTCCATA
CCGCCAGGTGGGAGTCTGGATGTGAGAAGCCACGGAACTCCATTCTGCAT
GGGTAGAGAGGGAGCATTCTGAGGTCCCTGGGCCTCACCGAGTCCAGAGG
CAAGGTTCTAGCTCTTGAACATCACAGGACTTGTACACCACAGAAGAGCT
GTACACCGCAGAAGAGGTGCGGGATGGTTGGAGGCTTAGTCAGCCCCAGG
CCGAAGAGAAAAAGGGTAGGGGGAGAAGGCACTGTGTGGTTCCCACACAG
GTGAAAACCTTTGTTCCGGTTTGGAGGCTGGAAATGCTGGGAGGCCTTCC
TGCTGGAGATTAGACATGCTCTTTGGGGGAAGGCCTATTGCATTATTCTT
GCATGGTGTGTCTTGATGAGCAGAGACAGCACATGGTTTTAGAGCTTTAT
TGTAGAAAAGCAGAGAGAGAGAGAGAAGACATCTGCTTTTCAGTAG

NACACTATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGG
CAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATG
CAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGATGGCTAAG
ATCAAAAATTCAGGTGACAGCAGATGCTGGCTAGGATGTGGAGAAAGAGG
AACACTCCTCCATTGTTGGTGGGATTTCAAGATTGTACAACCACTCTGGA
AATCAGTCTGGTGGTTACTCAGAAAATTGGACATAGTACTACCGGAGGAT
CCCAAAATACCTCTCCTGGGCATACATCCAGAAGATGTCCTAACCGGTAA
GAGGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCA
GAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAA
ATGTGGTACATTTACACAATGGAGTACTACTCAGCTATTAATAAGAATGA
ATTTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATTATCCTGA
GTGAGGTAACCCAATCACAAAGGAACTCGCACAATATGTACTCACTGATA
AATGGATATTAGCCCAGAAACTTAGGATACCCAAGATATAAGACACAATT
TGCTAAACGCATGAAGCTCAAGAAGAAGGAAGATCAAAGTGTGGAN

Query= MSMg01no529_a09.b1 MSMg01no529_a09.b1 CHROMAT_FILE:
MSMg01no529_a09.b1 PHD_FILE: MSMg01no529_a09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:49 2005
         (600 letters)



>mm_chr6_103172512_103173511
          Length = 1000

 Score = 1106 bits (572), Expect = 0.0
 Identities = 593/600 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ataaggcttaattcttcagtgtgatctgtaagattggtttggactttaaggctgaataca 60
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataagggttaattcttcagtgtgatctgtaagattggtttggactttaaggctgaataca 260

                                                                       
Query: 61  taggctccatccactgctacgcgcactgttgacactattagtgaactgctgggaggcaga 120
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taggctccatccactgctacgtgcactgttgacactattagtgaactgctgggaggcaga 320

                                                                       
Query: 121 cgtgaggaaataaagggggagggagagatgacccacatcccgccagagcttggggtctct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 cgtgaggaaataaagggggagggagagatgacccacatcccgccagagcttgggggctct 380

                                                                       
Query: 181 gagcagacagacacgggagactgccacttgttctccataccgccaggtgggagtctggat 240
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggcagacagacacgggagactgccacttgttctccataccgccaggtgggagtctggat 440

                                                                       
Query: 241 gtgagaagccacggaactccattctgcatgggtagagagggagcattctgaggtccctgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgagaagccacggaactccattctgcatgggtagagagggagcattctgaggtccctgg 500

                                                                       
Query: 301 gcctcaccgagtccagaggcaaggttctagctcttgaacatcacaggacttgtacaccac 360
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcctctccgagtccagaggcaaggttctagctcttgaacatcacaggacttgtacaccac 560

                                                                       
Query: 361 agaagagctgtacaccgcagaagaggtgcgggatggttggaggcttagtcagccccaggc 420
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 561 agaagagctgtacaccgcagaagaggtgcgggatggttggaggctcagtcagccccaggc 620

                                                                       
Query: 421 cgaagagaaaaagggtagggggagaaggcactgtgtggttcccacacaggtgaaaacctt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cgaagagaaaaagggtagggggagaaggcactgtgtggttcccacacaggtgaaaacctt 680

                                                                       
Query: 481 tgttccggtttggaggctggaaatgctgggaggccttcctgctggagattagacatgctc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgttccggtttggaggctggaaatgctgggaggccttcctgctggagattagacatgctc 740

                                                                       
Query: 541 tttgggggaaggcctattgcattattcttgcatggtgtgtcttgatgagcagagacagca 600
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 741 tttgggggaaggcctattgcattattcttgcatggtgggtcttgatgagcagagacagca 800


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1000
Length adjustment: 10
Effective length of query: 590
Effective length of database: 990
Effective search space:   584100
Effective search space used:   584100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)