Query= MSMg01no532_k23.b1 MSMg01no532_k23.b1 CHROMAT_FILE:
MSMg01no532_k23.b1 PHD_FILE: MSMg01no532_k23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:40 2005
(610 letters)
>mm_chr6_146470531_146471540
Length = 1010
Score = 1158 bits (599), Expect = 0.0
Identities = 605/607 (99%), Gaps = 1/607 (0%)
Strand = Plus / Plus
Query: 5 gaatt-aaatcggcttcttcttggccacctgggagacagagcttccttaagaatcagagc 63
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcaaatcggctgcttcttggccacctgggagacagagcttccttaagaatcagagc 263
Query: 64 agttgctttagaccagtggttctcaacctacgggttgtgacccccttagcaaccctctgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agttgctttagaccagtggttctcaacctacgggttgtgacccccttagcaaccctctgt 323
Query: 124 ctccaaaattacttacattgtaattcattacaggagcaagattacagttatgaagtagca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctccaaaattacttacattgtaattcattacaggagcaagattacagttatgaagtagca 383
Query: 184 acaaaaataattttatggtcgggtccctgaaaagggagtcacccctaccccatcagtaca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acaaaaataattttatggtcgggtccctgaaaagggagtcacccctaccccatcagtaca 443
Query: 244 ggacatacccagacaccaaattctcaacacaaaggtgatttactaccctggaggagtggc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggacatacccagacaccaaattctcaacacaaaggtgatttactaccctggaggagtggc 503
Query: 304 agcaagaaaagctgtggggagccgccctcacattcgccgttgcaagatggcgctgacatc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agcaagaaaagctgtggggagccgccctcacattcgccgttgcaagatggcgctgacatc 563
Query: 364 ctgtgttctaagtggtaaacaaataatctgcgcatgtgccaagggtagttttccacccca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctgtgttctaagtggtaaacaaataatctgcgcatgtgccaagggtagttttccacccca 623
Query: 424 tgtgctctgccttccccgtgacgacaactcggccgatgggctgcagccaatcagggagta 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgtgctctgccttccccgtgacgacaactcggccgatgggctgcagccaatcagggagta 683
Query: 484 atatgtcctaggcggagaataattctccttaaaagggacggggtttcgccattcgctctc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 atatgtcctaggcggagaataattctccttaaaagggacggggtttcgccattcgctctc 743
Query: 544 ttgcactcttgctcctgaagatgtaagcaataaagctcttgcgctcttgcgccctggctc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ttgcactcttgctcctgaagatgtaagcaataaagctcttgcgctcttgcgccctggctc 803
Query: 604 ctaaaga 610
|||||||
Sbjct: 804 ctaaaga 810
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space: 600000
Effective search space used: 600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_k23.g1 MSMg01no532_k23.g1 CHROMAT_FILE:
MSMg01no532_k23.g1 PHD_FILE: MSMg01no532_k23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:40 2005
(580 letters)
>mm_chr6_146601142_146602121
Length = 980
Score = 615 bits (318), Expect = e-180
Identities = 318/318 (100%)
Strand = Plus / Minus
Query: 263 gaaagcaagctgagcaacccaggggaagcaagccagtaacatctctccatggcttcagca 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 gaaagcaagctgagcaacccaggggaagcaagccagtaacatctctccatggcttcagca 921
Query: 323 tcagctcctgtttcctgacctgctgagttccagtcctgacttcttttggtgatgaacagc 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 tcagctcctgtttcctgacctgctgagttccagtcctgacttcttttggtgatgaacagc 861
Query: 383 aatgtagatgtgtaagctggataaaccctttctctccaacttgcttcttgttcatgtttg 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 aatgtagatgtgtaagctggataaaccctttctctccaacttgcttcttgttcatgtttg 801
Query: 443 tggtgcaggaatagaaacccgaagacagcatcagagacttggctccatgccaatgataag 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tggtgcaggaatagaaacccgaagacagcatcagagacttggctccatgccaatgataag 741
Query: 503 gtagcagtttctacttcggcagcaaagtctaagcagcggcagttttcacaagactcttcc 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gtagcagtttctacttcggcagcaaagtctaagcagcggcagttttcacaagactcttcc 681
Query: 563 ccaagttttcctttatgt 580
||||||||||||||||||
Sbjct: 680 ccaagttttcctttatgt 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space: 552900
Effective search space used: 552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
