XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTAG
GATGGAAAAGTACATTATCTTAAAGTAAACCCATGTTCCCAGGAGTGGTC
CCCTAGCCGGGTTCACTGGACCTTCCCCACTGGATTAACCCTTGAGGAAG
TAGACAAGGGCCTGTCTCAATCTGGAGCTAGGTTCAGATCTTAAAACAGT
TGATCTCACCCCTTCAGGAGCCTGCCAATGCGGGAAGTCACTTCTAAAAT
GACTGTCCTTTTTCCAAACACTGTTGAGACACTTCTTGGAGAGGTGTTCT
TATTTGGTAAAGGTGTGTCACGTACACATGCGCTCGAGTACACACACACA
CACACACACACACACACACACACACACACACAGGGACCGGAGAACTCCTT
GTGAGCTGCCTTCCCTCACCCCTTGCCCCCAGACATTTGTGTGCATGTGG
AACATGGAGAACAACCTCAGGTGTCATCCTCTGGAATGTCACCCATCACC
CTTGAGACAAGGTCTCTCCTTGGCCTGGAGCTTACTGCTTAGGCTAGACT
GGCCGGCCAGTGAGCCCCACGTAATCCTCCTGTTTCTGCCTCCTCAACAC
CGAGATTATGAGTGTATGCTACCTTATATACTGGCTTTTTACGTATGTAC
TGGGGATCTAAACTCAGCTCCCATGCTTACACGAGCTAGCCCTTTCCCTC
TGCCATCTCTCCATCCTCTAGTTGGTAACTTTTTATTGAGTAGTG

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTCCAGAATCCTAACGAATAAGGGTTTACC
ACACCTTCTTGGTCTTCTCACATCTGTGACAGGTCTTCTGTCCTTCCTTG
TCTTAAAAAAACAAACAAAAACAAAAGAGCAGGCGCAGGGCAGCTGGAAG
AAAGCACCCAAGCACCTGCACGGTGGGTGCCACTCTGACGGGCGAACAAA
TATGGGGAGAGGGGAAAGATGGAGTCCCTGGTGGAGAGAGGGGAGAGAAA
GCAGAGAACTGGAGACACAAGGCAGTGAGGAACAGATGGATAGAAGGAGC
CTGTGCGGCCACTGAGGCCATGGTGATGCCCAAGGCCTAAGCTGCCTCTA
GAGCCATGTCTGGGTCTGTGATCCTGCTGTATCGAGGGTGTATGTTGATG
CCCCATGCCTGTGTTACCACCAAAGACCATGTAGAAGTCCTTGGTTTGGG
CTGCCACCTGAGGCTATGTTGAAGTTCGAGCACTGTGCTGAGCTGGTCCT
GCCCCTCTCTGGACGGCACACTGGGGAGAGCTGGCTCCTCCCCTTGCCTA
GGTAGCATAGGAGAGCTGGCTCTGGTAGCAGGGGAACAAGAGAGCTGGCC
CTGCCCCTCTTCTGGAGTGTGGGTGGGGTGGNNNTATNNNTAATAAAATA
TATATTTTAATATATTCGGTTTTATACATTGGCTCTGTTATAACG

Query= MSMg01no534_d10.b1 MSMg01no534_d10.b1 CHROMAT_FILE:
MSMg01no534_d10.b1 PHD_FILE: MSMg01no534_d10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:38 2005
         (699 letters)



>mm_chr6_37995047_37996145
          Length = 1099

 Score = 1303 bits (674), Expect = 0.0
 Identities = 689/696 (98%), Gaps = 4/696 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctaggatggaaaagtacattatcttaaagtaaacccatgttcccaggagtggtc 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctaggatggaaaagtacattatcttaaagtaaacccatgttcccaggagtggtc 263

                                                                       
Query: 64  ccctagccgggttcactggaccttccccactggattaacccttgaggaagtagacaaggg 123
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccctagccaggttcactggaccttccccactggattaacccttgaggaagtagacaaggg 323

                                                                       
Query: 124 cctgtctcaatctggagctaggttcagatcttaaaacagttgatctcaccccttcaggag 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cctgtctcaatctggagctaggttcagatcttaaaacagttgatctcaccccttcaggag 383

                                                                       
Query: 184 cctgccaatgcgggaagtcacttctaaaatgactgtcctttttccaaacactgttgagac 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cctgccaatgcgggaagtcacttctaaaatgactgtcctttttccaaacactgttgagac 443

                                                                       
Query: 244 acttcttggagaggtgttcttatttggtaaaggtgtgtcacgtacacatgcgctcgagta 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acttcttggagaggtgttcttatttggtaaaggtgtgtcacgtacacatgcgctcgagta 503

                                                                       
Query: 304 cacacacacacacacacacacacacacacacacacacacacagggaccggagaactcctt 363
           |||||||||||||||||||||||||||||| |||||||    ||||||||||||||||||
Sbjct: 504 cacacacacacacacacacacacacacacatacacaca----gggaccggagaactcctt 559

                                                                       
Query: 364 gtgagctgccttccctcaccccttgcccccagacatttgtgtgcatgtggaacatggaga 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtgagctgccttccctcaccccttgcccccagacatttgtgtgcatgtggaacatggaga 619

                                                                       
Query: 424 acaacctcaggtgtcatcctctggaatgtcacccatcacccttgagacaaggtctctcct 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 acaacctcaggtgtcatcctctggaatgtcacccatcacccttgagacaaggtctctcct 679

                                                                       
Query: 484 tggcctggagcttactgcttaggctagactggccggccagtgagccccacgtaatcctcc 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tggcctggagcttactgcttaggctagactggccggccagtgagccccacgtaatcctcc 739

                                                                       
Query: 544 tgtttctgcctcctcaacaccgagattatgagtgtatgctaccttatatactggcttttt 603
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 740 tgtttctgcctcctcaacaccgagattatgagtgtatgctacctcatatactggcttttt 799

                                                                       
Query: 604 acgtatgtactggggatctaaactcagctcccatgcttacacgagctagccctttccctc 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 acgtatgtactggggatctaaactcagctcccatgcttacacgagctagccctttccctc 859

                                               
Query: 664 tgccatctctccatcctctagttggtaactttttat 699
           ||||||||||||||||||||||||||||||||||||
Sbjct: 860 tgccatctctccatcctctagttggtaactttttat 895


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 66
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 699
Length of database: 1099
Length adjustment: 10
Effective length of query: 689
Effective length of database: 1089
Effective search space:   750321
Effective search space used:   750321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)