Query= MSMg01no536_l14.b1 MSMg01no536_l14.b1 CHROMAT_FILE:
MSMg01no536_l14.b1 PHD_FILE: MSMg01no536_l14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:55 2005
(164 letters)
>mm_chr6_33794804_33795368
Length = 565
Score = 304 bits (157), Expect = 2e-87
Identities = 163/165 (98%), Gaps = 1/165 (0%)
Strand = Plus / Minus
Query: 1 gatgtttgtagctgaatttctggctaatggcctgtctcttttgtttaattttgagactta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gatgtttgtagctgaatttctggctaatggcctgtctcttttgtttaattttgagactta 306
Query: 61 aatctgagtctcaccctgacttatttgactgtgtccctatctatccatgaccttcatctt 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aatccgagtctcaccctgacttatttgactgtgtccctatctatccatgaccttcatctt 246
Query: 121 gtttaattgagggatt-aaaaaaaattagcaaagcattttctact 164
|||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 245 gtttaattgagggattaaaaaaaaattagcaaagcattttctact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 164
Length of database: 565
Length adjustment: 8
Effective length of query: 156
Effective length of database: 557
Effective search space: 86892
Effective search space used: 86892
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no536_l14.g1 MSMg01no536_l14.g1 CHROMAT_FILE:
MSMg01no536_l14.g1 PHD_FILE: MSMg01no536_l14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:55 2005
(280 letters)
>mm_chr6_33646868_33647547
Length = 680
Score = 511 bits (264), Expect = e-149
Identities = 276/280 (98%)
Strand = Plus / Plus
Query: 1 ctaacttttttcagttacatattgagtaagtggcacagtcagaattcaaacctcagtaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaacttttttcagttacatattgagtaagtggcacagtcagaattcaaacctcagtaat 260
Query: 61 atgactccatagccactcactcctgtgtttgccacactggatgtaaagctgtcatcacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgactccatagccactcactcctgtgtttgccacactggatgtaaagctgtcatcacat 320
Query: 121 gcttacagtgaaatcacctagtaactgaatccttatctccattacatcggactgcagaag 180
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 321 gcttacagtgaaatcacctagtaactgactccttatctccattacagcggactgcagaag 380
Query: 181 tcctagtaagccaatgctcagagagaacttgcaagaaaggagaatgacttatttgtcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 tcctagtaagccaatgctcagagagaacttgcaagaaaggagaatgacttatttgtcctt 440
Query: 241 ggttgttgttggtgtgtgtgtgtgtgtgtgtgtgtgtgtg 280
|||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 ggttgttgttggggtgtgtgtgtgtgtgtgtgtgtgtgtg 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
