Query= MSMg01no537_h23.b1 MSMg01no537_h23.b1 CHROMAT_FILE:
MSMg01no537_h23.b1 PHD_FILE: MSMg01no537_h23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:52 2005
(638 letters)
>mm_chr6_16774909_16775946
Length = 1038
Score = 998 bits (516), Expect = 0.0
Identities = 606/640 (94%), Gaps = 12/640 (1%)
Strand = Plus / Minus
Query: 5 gaattctttaagt----gctttcaacctgtcaggtcaccaacccaccttcaagccacagt 60
||||||||||||| | |||||||||||||||||| |||||||||||||||||
Sbjct: 774 gaattctttaagtaaagg----caacctgtcaggtcaccagtgcaccttcaagccacagt 719
Query: 61 gatacttctgatatagcaggatggaattccttcctattctttatgggtatctgggcacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gatacttctgatatagcaggatggaattccttcctattctttatgggtatctgggcacag 659
Query: 121 ctcttgcgatttcctggtacagcagacagcagtttttg-ttaaatataatcatgtaaaaa 179
||||||| ||||||||||||||| ||||| || ||||| ||||||||| |||||||||||
Sbjct: 658 ctcttgctatttcctggtacagccgacagtag-ttttgattaaatatattcatgtaaaaa 600
Query: 180 cagaaaggtaacag-actactaagatttaaataatttcttataaagtttgaaaacttatg 238
||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 599 cagaaaggtaa-tgtactactaagatttaaataatttcttacaaagtttgaaaacttatg 541
Query: 239 catgtaaagtaggcgttattgtcttagatcctaggaggacaaagtaataactttttatat 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 540 catgtaaagtaggcgttattgtcttagatcctaggaggacaaagtaataactttttacat 481
Query: 299 gcttgtatatcattctgaaattctctaatctttgtttcctatcctagaaattatgtggac 358
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gcttgtatatcatcctgaaattctctaatctttgtttcctatcctagaaattatgtggat 421
Query: 359 ttatagactcttcttatactgtttgtttctagatcacatacaagacttcctcctataaaa 418
||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 420 ttatagactcttcttatactgtttgcttctagatcacatacaagccttcctcctataaaa 361
Query: 419 taaactcgtctattatttacttgttttttaaaaatagatgccctcttttcctcaccatgc 478
||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 360 taaacccatctattatttacttgtttttttaaaatagatgccctcttttcctcaccatgc 301
Query: 479 cttttcttcttgagaccactttaaccctatatatttgatatcccctagttcaccctggct 538
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 300 cttttcttcttgagaccactttaaccctatatctttgatgtcccctagttcaccctggct 241
Query: 539 aattaaggcagcagtcattggaccaaagagtaaatgtatctcttcatataattccaaatt 598
|||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 240 aattaatgcagcagtcattgaaccaaagagtaaatgtatctcttcatataattccaaatt 181
Query: 599 ccagagtggttgtacaagcttgcaatcccactaaccatgg 638
||||||||||||||||||||||||||||||||||| ||||
Sbjct: 180 ccagagtggttgtacaagcttgcaatcccactaacaatgg 141
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_h23.g1 MSMg01no537_h23.g1 CHROMAT_FILE:
MSMg01no537_h23.g1 PHD_FILE: MSMg01no537_h23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:53 2005
(638 letters)
>mm_chr6_16597077_16598113
Length = 1037
Score = 1210 bits (626), Expect = 0.0
Identities = 635/638 (99%), Gaps = 1/638 (0%)
Strand = Plus / Plus
Query: 1 cctaaattccagttcataggtaagaatcgtcatgtagttgtcccttgaaaatctcagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctaaattccagttcataggtaagaatcgtcatgtagttgtcccttgaaaatctcagttc 260
Query: 61 ttcatttccacttcatttaatgcaacccagtatttgcagagtaataattactccaccgtt 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 ttcatttccacttcatttaatgcaacccagtatttgctgagtaataattactccaccgtt 320
Query: 121 agtcatgtgtaaaaagtaattggtggaactcatttaatagggaaatatcctaaagtgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtcatgtgtaaaaagtaattggtggaactcatttaatagggaaatatcctaaagtgaga 380
Query: 181 atgcagacaatatcattttttccccctgggtagatgtaaataaatgtctgtctttcctag 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgcagacaatatcatttttt-cccctgggtagatgtaaataaatgtctgtctttcctag 439
Query: 241 atataacagcaaagaccaacaaaacaatttcactcaactctagtttaggaaaccagttaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atataacagcaaagaccaacaaaacaatttcactcaactctagtttaggaaaccagttaa 499
Query: 301 ctgattgggataatttgccggaggttgagtatggaattagctactagaatacaatgacat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctgattgggataatttgccggaggttgagtatggaattagctactagaatacaatgacat 559
Query: 361 aaagacagttgctccatcaagaatccaaaaccagtatgaatgataacttccaaaagttgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aaagacagttgctccatcaagaatccaaaaccagtatgaatgataacttccaaaagttgc 619
Query: 421 atctctaaaagtccttacacaactgataggcagatctgcttgaatatctgatctccccag 480
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 620 atctctaaaagtccttacacaactgataggcagatctacttgaatatctgatctccccag 679
Query: 481 tcattctttaatatttgaacaacttaaggaggggggtgaagtatgactcttgtaagtttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tcattctttaatatttgaacaacttaaggaggggggtgaagtatgactcttgtaagtttc 739
Query: 541 aggagcttctggaatcttgtaaatttaaactaattcctgagccttatgagtttccctgtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aggagcttctggaatcttgtaaatttaaactaattcctgagccttatgagtttccctgtt 799
Query: 601 agcattgggaggaaatgtttcaattcaagggaacagca 638
||||||||||||||||||||||||||||||||||||||
Sbjct: 800 agcattgggaggaaatgtttcaattcaagggaacagca 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1037
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1027
Effective search space: 644956
Effective search space used: 644956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
