XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTG
ATCTATTTTTAATTTCCTTATATCAGGATAGTACATAGGGAGCTAGCTTC
TATCTCTATATGTGACTACACAGTTCTTCCTTATCCCTGTTGAACAGACT
CTTTTTCCTTCACTGCATGCTCTGCCACCTTTTTTGAGAATTAGGTGGCT
ACAGCTGTATGCATTTCTTTTTAGTATTAATTAATTAATTATTTTGTTAA
TGTACATCTATAATATTCTCCAGTCCCTGCCCACCCCCCTTGAAGAGTTC
TTCCTATCCCCCTTTCCATCTGAGAGGGTGTGCCTCACCAGGTATTTCCC
CTCCCTGGGGCATCAATTCTTTATATGATTAGGTGCATCCTCTTCTGATG
AGGCAAGACAAGGCAGTCCTCTGTTACATATGTGCCAAGGACCTCAGACC
AGTGAGTGAGATGCAGATACTCATAGCATAGCATTGGATTGAGTTCAGGG
ACCCCTATGGATAAGTTAGGGGAAAGACAGAAGGGGTTGAAGGGCATGGC
AATCCCATAGGGAGACCAACAGCATCAACTAACCTGACACCTTGGAGCTC
CCAGAGACTAAACCACAAACCTCTATGAATTTCTAAGCCCTTTTTCTATT
GGTCTGTGTATTTATTTTTGAGCTGTTTTCATGCTGTTCTGTAACAATTT
TAAATCAAGAATCGTTATGGTTCTTTCCTGCTTCCAT

GGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTCTCCCTCCTTTTACCTTCTGTGGCATGAAGTTCCA
TTTACTTCTTAGTTCACTCAGCTCTTCCAAATTCCACCAGTCTATTTACC
CAGAACTGAATGATGGACATCCTTCTGATTCAAAATAAAAATTATTAATG
TACTTGTGCATTCTTAAATTCTATTGATACTTTGACTGTGGATATAATAA
ACATAAATTAGAAATATTTTATCTTTTCCTGTCATCTAATTTTGGGATAT
TCCTTGGAAAGTTTTCATTTAGCAAGTACCTAATAAATACAGATCATTTC
CAGAATCCTTGGAAAATTGTACTTAATTCCAGAAGTACACATCATGATCT
TAGACTATTGTGTTTAAACCTCAATAGTTTAAGCTTTGCTTAAACGTTAA
TAGAAGAGTTCTGCCCCCTATGATTAATGTACAGCTCGAAAGGACAGATT
TAGGTAAACAAAATGCTGTAGCAAATAAACCCGAAATTGTCGTACCTCAA
AACAATAGATTTATTTCTTACTCATTAAATAGCCTCATGCACATGCTTCT
CAGGTCTCTTTATAGGGACTCAACTGCCTTTCATGTTATCACCTACCTTT
TGCTAAGATCTCTGGAGTCCACTTAATGTCTGCATCAGTACCAGAATAAT
CAATATATCAAGATAGAGGGATTTGTGGGGTTTTATGAATCAAAGTA

Query= MSMg01no538_a22.g1 MSMg01no538_a22.g1 CHROMAT_FILE:
MSMg01no538_a22.g1 PHD_FILE: MSMg01no538_a22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:37 2005
         (667 letters)



>mm_chr6_25258430_25259496
          Length = 1067

 Score = 1236 bits (639), Expect = 0.0
 Identities = 660/667 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctccctccttttaccttctgtggcatgaagttccatttacttcttagttcactcagctc 60
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctctctccttttaccttctgtggcatgaagttccatttacttcttagttcactcagctc 260

                                                                       
Query: 61  ttccaaattccaccagtctatttacccagaactgaatgatggacatccttctgattcaaa 120
           |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||
Sbjct: 261 ttccaaattccaccagtctacttacccagaactgaatgatggacatccttttgattaaaa 320

                                                                       
Query: 121 ataaaaattattaatgtacttgtgcattcttaaattctattgatactttgactgtggata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataaaaattattaatgtacttgtgcattcttaaattctattgatactttgactgtggata 380

                                                                       
Query: 181 taataaacataaattagaaatattttatcttttcctgtcatctaattttgggatattcct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taataaacataaattagaaatattttatcttttcctgtcatctaattttgggatattcct 440

                                                                       
Query: 241 tggaaagttttcatttagcaagtacctaataaatacagatcatttccagaatccttggaa 300
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 441 tggaaagttttcatttagcaagtacctaataaatacagataatttccagaatccttggaa 500

                                                                       
Query: 301 aattgtacttaattccagaagtacacatcatgatcttagactattgtgtttaaacctcaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aattgtacttaattccagaagtacacatcatgatcttagactattgtgtttaaacctcaa 560

                                                                       
Query: 361 tagtttaagctttgcttaaacgttaatagaagagttctgccccctatgattaatgtacag 420
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 561 tagtttaagctttgcttaaacgttagtagaagagttctgccccctatgattaatgtacag 620

                                                                       
Query: 421 ctcgaaaggacagatttaggtaaacaaaatgctgtagcaaataaacccgaaattgtcgta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctcgaaaggacagatttaggtaaacaaaatgctgtagcaaataaacccgaaattgtcgta 680

                                                                       
Query: 481 cctcaaaacaatagatttatttcttactcattaaatagcctcatgcacatgcttctcagg 540
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttcaaaacaatagatttatttcttactcattaaatagcctcatgcacatgcttctcagg 740

                                                                       
Query: 541 tctctttatagggactcaactgcctttcatgttatcacctaccttttgctaagatctctg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tctctttatagggactcaactgcctttcatgttatcacctaccttttgctaagatctctg 800

                                                                       
Query: 601 gagtccacttaatgtctgcatcagtaccagaataatcaatatatcaagatagagggattt 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gagtccacttaatgtctgcatcagtaccagaataatcaatatatcaagatagagggattt 860

                  
Query: 661 gtggggt 667
           |||||||
Sbjct: 861 gtggggt 867


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space:   694449
Effective search space used:   694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)