Query= MSMg01no541_b05.b1 MSMg01no541_b05.b1 CHROMAT_FILE:
MSMg01no541_b05.b1 PHD_FILE: MSMg01no541_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:35 2005
(681 letters)
>mm_chr6_11065506_11066586
Length = 1081
Score = 1288 bits (666), Expect = 0.0
Identities = 675/678 (99%)
Strand = Plus / Minus
Query: 4 ggaattcaactattatttgttttcaatctagaaaatttaccttatatacacccaggttag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 ggaattcaactattatttgttttcaatctagaaaatttaccttatatacacccaggttag 822
Query: 64 tgttcttctggtcatttttttttcacttggatctgttatgctaaaataacaaatcatctc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 tgttcttctggtcatttttttttcacttggatctgttatgctaaaataacaaatcatctc 762
Query: 124 acgagaaaagctggctctgcagcatctatgtctgtcaggtttcaacactgcttatttttg 183
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 acgagaaaagctggctccgcagcatctatgtctgtcaggtttcaacactgcttatttttg 702
Query: 184 tcttcatgtttcatctcatacacatggcgtattgttggtttgaacaaccatggaaagccc 243
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 701 tcttcatgtttcatctcatacacatggcgtattgttggtttgaacaacaatggaaagccc 642
Query: 244 atatcacacttcaaaatcttgcttcctgtagagtagttaacaatagataaaacacacaca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 atatcacacttcaaaatcttgcttcctgtagagtagttaacaatagataaaacacacaca 582
Query: 304 ttcctgatcacctttcacttgtaccttggagaattactgtagcagtgcttgaggcaagct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ttcctgatcacctttcacttgtaccttggagaattactgtagcagtgcttgaggcaagct 522
Query: 364 tcaataaaactacagaataaagcataatatctgcaaaggttttgtatctcagtacattgt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tcaataaaactacagaataaagcataatatctgcaaaggttttgtatctcagtacattgt 462
Query: 424 atgttattaatgtaacaaagtagttcatgttgatatttttgtgatccttgacaataagaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 atgttattaatgtaacaaagtagttcatgttgatatttttgtgatccttgacaataagaa 402
Query: 484 aatagaccatgagaaaaatcagtacagtttaggagagaagtagagcctgcctgatacgca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 401 aatagaccatgagaaaaatcagtacagtttaggagagaagtagagcctgcctgatacaca 342
Query: 544 aagagaaacatgtcttgtcacaaaaattgttccctgaaaacttaagcttcacagaggaat 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 aagagaaacatgtcttgtcacaaaaattgttccctgaaaacttaagcttcacagaggaat 282
Query: 604 caaagttagtgcagagtgtgcttttcttgacagttccttgtatgccatatctaagacttc 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 caaagttagtgcagagtgtgcttttcttgacagttccttgtatgccatatctaagacttc 222
Query: 664 ctagtgtgtgccttatga 681
||||||||||||||||||
Sbjct: 221 ctagtgtgtgccttatga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1081
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1071
Effective search space: 718641
Effective search space used: 718641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no541_b05.g1 MSMg01no541_b05.g1 CHROMAT_FILE:
MSMg01no541_b05.g1 PHD_FILE: MSMg01no541_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:35 2005
(667 letters)
>mm_chr6_10905167_10906233
Length = 1067
Score = 1284 bits (664), Expect = 0.0
Identities = 667/668 (99%), Gaps = 1/668 (0%)
Strand = Plus / Plus
Query: 1 agttgggctcagtttgtgacctttataaaattcagaattaacataattcttgatattttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 agttgggctcagtttgtgacctttataaaattcagaattaacataattcttgatattttg 259
Query: 61 atccatcaaatatattttagtttcagtttgtcaatactcaccagattattgctgagatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atccatcaaatatattttagtttcagtttgtcaatactcaccagattattgctgagatta 319
Query: 121 tggtgagttcacactgaatctatagactaacttaatgataatttgtatcttgacaataat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tggtgagttcacactgaatctatagactaacttaatgataatttgtatcttgacaataat 379
Query: 181 aactattcatgtctagaatatagttatctatttccttgattgtgattttatagttttttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aactattcatgtctagaatatagttatctatttccttgattgtgattttatagttttttt 439
Query: 241 -ccatttaaatagtatatacatcttattgtatctacatggtgatactttatttaggtatt 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tccatttaaatagtatatacatcttattgtatctacatggtgatactttatttaggtatt 499
Query: 300 ataagtagtaatattcatagcttaaagttacaaatttttattattcctatacccaaacaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ataagtagtaatattcatagcttaaagttacaaatttttattattcctatacccaaacaa 559
Query: 360 tgctttcagtatattaaccttgtaatatgagccttgttatttgagaaaaaccttcttttc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgctttcagtatattaaccttgtaatatgagccttgttatttgagaaaaaccttcttttc 619
Query: 420 ctgaatattttcatgaaataccattagaaatgatattagctttgtgatttttatacatgt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctgaatattttcatgaaataccattagaaatgatattagctttgtgatttttatacatgt 679
Query: 480 tcttcattaaattgaagaagttgcttctgtttctaattgtctatgtatcttctttgtaat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tcttcattaaattgaagaagttgcttctgtttctaattgtctatgtatcttctttgtaat 739
Query: 540 aggtaatgattgggtttttctgacgagtttctactgtgactggttgaccatgtgattatt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aggtaatgattgggtttttctgacgagtttctactgtgactggttgaccatgtgattatt 799
Query: 600 tttctttaactggatgaaatattctgctctaattggttctaaaaacttgaaccatcctcc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tttctttaactggatgaaatattctgctctaattggttctaaaaacttgaaccatcctcc 859
Query: 660 atacttga 667
||||||||
Sbjct: 860 atacttga 867
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
