TTTTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCATGTCGCTCATGTACCAGTCTTGAGGATGTGGTGCATCCCT
TTCATCTGCTATGCACAGCCTGAGTTCGGTGTGTCCCAAAGTGCAATATG
GAAATGAAGAGACTAGCTTTACAGATGAAAGTTCCAGGTTATAGTGAAGC
TGACCATCAATTATGATGTCATGTTGATAGAACATGTGTCACACCTGTGT
GGTAACATGTTAGGCTGAAGAGAGTTCTCTGCCTGGCTGAAATCCTTCCG
CATAACCTCAGCCCCAAGGTAATCATAAGAAAATCACAACAATTCCCAAT
TTTATTCTATTAATATGTAAGGTTATTTATTACAAGTACTCCGCAGAACT
GTCCAAGTCTTTAGAGAAAGATTGTATAAATAGTTCCACCCAAGAAGGGA
TGCTTGTAATTTGGCATGAGTTCTGGGACAAAGAAATATCAGATCAAACA
TGAAGGAAATGTATCAATTTTGATTCATTAGATATGGCAATTACACTATA
TTAATGTAATAAGGAGACAAGAATGATTAATCACCAGAGAAAGAATGTCA
GGCACACCGCGACAGGTCTGATGCAGATCTTAGAAGGTAGCTGGTGTGAG
ATGTATAGGAATGTTCTGAAATTCTTCACAGTATTCCTTTCAGTGCACAT
CTATTCTAAAATTGAAAGCTCGTCGAGAAAGAAGACTCTCTGTTCCACTT
ACTGCAG

TCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGATTGAATTTTCTCATTC
TGAAAAAAAAATTGCCTTGGAGATTTGGGTAGAGGTTATAGTGAATCTGT
ATGTCAATTTGGAATCAGTATATTTTATAAACCTTTTTATAAATAGGTGT
AAGTTCACATATACTTGTAAGAAATAATATAAAGATGCTTCTATATTTTA
TTTCATTTTTCCCAATAATAACTGCTTATAAACTACAACTTCAAATTAAA
ACATCCACATTTGATAAAGAACATTCCCATATCCAACATATTTCCACTAC
CATGAGGAACCATATTGATAGCTACACCTCTCTACCTTCTCTTCTTTTCC
TCCCCATCCATTAAATAAAAACAAAACTTTTCTAGAAAGGTCTTATTTTT
CTCCATTTGCATAATTTTGCTGGCTTCAACAATATAGTGTAAATGAAAAT
ATAAAAGTGTGTAATTTGGTTTGCCATTTTCTTCTCTTTTCAGTTCATTT
ATTTTCAGTCTATTTTCTTAGCTTGAACATAGCCTTGTCTCTAGTCTATT
TTTTGTTTGGGATTTTTGGTCAGTTTCCTTTGTATTTCCATATGGGTATT
GAATCCCTCAATGTTTTTATTTTAGTTATTTTGCATTTTGAAATTTCATT
CACTTATTTTTTTCTAACCATCAACTACTTCTTTGTTGAGATT

Query= MSMg01no541_c09.g1 MSMg01no541_c09.g1 CHROMAT_FILE:
MSMg01no541_c09.g1 PHD_FILE: MSMg01no541_c09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:41 2005
         (661 letters)



>mm_chr6_105490448_105491508
          Length = 1061

 Score =  731 bits (378), Expect = 0.0
 Identities = 402/410 (98%)
 Strand = Plus / Minus

                                                                        
Query: 252  tccaacatatttccactaccatgaggaaccatattgatagctacacctctctaccttctc 311
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1061 tccaaaatatttccactaccatgaggaaccatattgatagctacacctctctaccttctc 1002

                                                                        
Query: 312  ttcttttcctccccatccattaaataaaaacaaaacttttctagaaaggtcttatttttc 371
            |||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 1001 ttctcttcctccccatccattaaataaaaacaaaactttactagaaatgtcttatttttc 942

                                                                        
Query: 372  tccatttgcataattttgctggcttcaacaatatagtgtaaatgaaaatataaaagtgtg 431
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 941  tccatttgcataattttgctggcttcaacaatatactgtaaatgaaaatataaaagtgtg 882

                                                                        
Query: 432  taatttggtttgccattttcttctcttttcagttcatttattttcagtctattttcttag 491
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881  taatttggtttgccattttcttctcttttcagttcatttattttcagtctattttcttag 822

                                                                        
Query: 492  cttgaacatagccttgtctctagtctattttttgtttgggatttttggtcagtttccttt 551
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 821  cttgaacatagccttgtctctagtctattttttgtttgggatttttggtcagttttctgt 762

                                                                        
Query: 552  gtatttccatatgggtattgaatccctcaatgtttttattttagttattttgcattttga 611
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 761  gtatttccatatgggtattaaatccctcaatgtttttattttagttattttgcattttga 702

                                                              
Query: 612  aatttcattcacttatttttttctaaccatcaactacttctttgttgaga 661
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701  aatttcattcacttatttttttctaaccatcaactacttctttgttgaga 652


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space:   684201
Effective search space used:   684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)