NNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTGTTTGGGGCACCGGTGCTCATAAAATAGTGTCCTTTACATT
ACAGAGATAAGCTATGTTGACTAAAACTCTTAAAACATAGAATTAAGAAA
AACCTCTAAGCTATAAAGAGCTGGTGGAATGCTAACTTTAACTCCAACTT
AACTTAGTCCTGACAAAAAAATATGAGGGCAACAATTTTAGAGATAATTT
CTAAGGACTGCTTAAAGGAATTCCACTTGCATTTGATAGAAGTATGCTTC
TCAAAAAGCAAATATTTGACCTGCATTCTACTTCAGGATGTTTGCATTTG
GTCAACTAAAAAGCTAAAGCCAATGACTCATTTTTAAGGAGCCTTGAGAA
AAGCATGCAATTACCAGTTTGAGAAATAGTTGTGCACATAAAGAAACTTT
AGCAAACCACTAAGTATCACATGATAAGTCATTTTAAAGATTTTTATTTT
CTTATAATTTTATAGTTGTGAGATATATGAGATGGCATGTAATTTTATAG
TTATAAGTAAATAAAAATATCATACTATTTTCTGTTTAACTTTCCCTGAA
AGAACTTTCCATGAAAGATAAACATTCAATAGAATCCTTCTCTGACATTT
TTCATACTCCAACCCAGTTAAAAATACATTATTTTGCTATATACAGAGAT
CCATATACTCAGTTTATCTAAAGACCCCCATAGAATAGCACAGGGCTTTG
TATATTACAATTATTTCATAAAATGCT

NNCCGAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTCTACCCCATT
TTTTTAAGTTAATGCTTTTTAAAAAAAATTTTATTAGATACTTTCTTCAT
TTACATTTCAAATGCTATCCCAATAGTCCCCTATACTCTCCCCCACCCTC
CTCCCCTACCTACTCATTCCCACTTTTTGACCCTGGCATTCCCCTGTACT
GGGGCATATAAAGTTTGCTAGACCAAGGGGCCTCTCTTCCTAATAATGGC
CGACTAGGCCATCTTCTGCTACATATGCAGCTAGAGACACGAGCTCCGGG
AGTACTGGTTAGTTCATATTGTTGTTCCACCTATTGGGTTGCAGACCCTT
TCATCTCTTGGGTACTTTCTCTAGCTCCTACATTGTGGGCCCTGTGTTCC
ATCCTATAGATGGCTGTGAACATCCACTTCTGTATTTGCCAGGCACTGGC
ATAGACTCACAGGAGACAGCTATATCAGGGTCCTTTCAACAAAATCTTAC
TGGCATATGCAATAGTGTCTGCGTTTGGTGGCTGATTATGGGATGGATCC
CTGGGTGGGGCAGTCTCTGGATGGTCCATCCTTTCGTTTTAGCTCCAAAC
TTTGTCTCTGCAACTCCGTCCATGGACACTTTATTTCCTATTCTAGGGAG
GAAAGAAGTATCCATGCGTTGGGCTACTTTCTTGATTTTCTGGGTTTTGG
AGCTGTATCTTGGGN

Query= MSMg01no543_n22.b1 MSMg01no543_n22.b1 CHROMAT_FILE:
MSMg01no543_n22.b1 PHD_FILE: MSMg01no543_n22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:22 2005
         (608 letters)



>mm_chr6_14665363_14666370
          Length = 1008

 Score = 1160 bits (600), Expect = 0.0
 Identities = 603/604 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgtttggggcaccggtgctcataaaatagtgtcctttacattacagagataagc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtttggggcaccggtgctcataaaatagtgtcctttacattacagagataagc 264

                                                                       
Query: 65  tatgttgactaaaactcttaaaacatagaattaagaaaaacctctaagctataaagagct 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tatgttgactaaaactcttaaaacatagaattaagaaaaacctctaagctataaagagct 324

                                                                       
Query: 125 ggtggaatgctaactttaactccaacttaacttagtcctgacaaaaaaatatgagggcaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggtggaatgctaactttaactccaacttaacttagtcctgacaaaaaaatatgagggcaa 384

                                                                       
Query: 185 caattttagagataatttctaaggactgcttaaaggaattccacttgcatttgatagaag 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caattttagagataatttctaaggactgcttaaaggaattccacttgcatttgatagaag 444

                                                                       
Query: 245 tatgcttctcaaaaagcaaatatttgacctgcattctacttcaggatgtttgcatttggt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tatgcttctcaaaaagcaaatatttgacctgcattctacttcaggatgtttgcatttggt 504

                                                                       
Query: 305 caactaaaaagctaaagccaatgactcatttttaaggagccttgagaaaagcatgcaatt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 caactaaaaagctaaagccaatgactcatttttaaggagccttgagaaaagcatgcaatt 564

                                                                       
Query: 365 accagtttgagaaatagttgtgcacataaagaaactttagcaaaccactaagtatcacat 424
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 565 accagtttgagaaatagttgtgcacgtaaagaaactttagcaaaccactaagtatcacat 624

                                                                       
Query: 425 gataagtcattttaaagatttttattttcttataattttatagttgtgagatatatgaga 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gataagtcattttaaagatttttattttcttataattttatagttgtgagatatatgaga 684

                                                                       
Query: 485 tggcatgtaattttatagttataagtaaataaaaatatcatactattttctgtttaactt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tggcatgtaattttatagttataagtaaataaaaatatcatactattttctgtttaactt 744

                                                                       
Query: 545 tccctgaaagaactttccatgaaagataaacattcaatagaatccttctctgacattttt 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tccctgaaagaactttccatgaaagataaacattcaatagaatccttctctgacattttt 804

               
Query: 605 cata 608
           ||||
Sbjct: 805 cata 808


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space:   596804
Effective search space used:   596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)