XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
CACCCGAGGATACCAAATGGCTGAGAAGCACCTGAAAAAATGTTCAACAT
CCTTAATCATCAAAGAAATGCAAATCAAAACAACCCTGAGATTCCATCTC
ACACCAGTCAGAATGGCTAAGATCAAAAACTCAGGTGACAGCAGATGTTG
GCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCA
AGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTG
GATATAGTACTACTGGAGGATCCTGCAATACCTCTCCTGGGCATATATCC
AGAAGATGTCCCAACGTGTAAGAAGGTCACATGCTCCACTATGTTCATAG
CAGCCTTATTTATAAAAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCA
ACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAATGGAGTACTA
TTCAGCTATTAAAAAGAATGAATTTGTGAAATTCCTAGGCAAATGGTTGG
ACCTGGAGGGCATCATCCTGAGTGAGGTAACACAATAACAAAAGAACTCA
AATGATATGTACTCACTGATAGGTGGATATTAGCCCAGAAACTTAGTATA
GCAAGATATAAGGTACAATTTGCAAAACACATGAAACTGAAGAAGAACGG
AGACCAAAATG

AATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCTCACTTGCAACATGAATGATTCATAAACAAC
TGCACCATTAAACATACACCTGACCATTGTATGGGCAGCTACACTACTGA
AGAATTTCAACTCGTGAATCATTTACCTCTCTCTCTTTTTTTCTTTTACA
TGTAATGCATTATATTTCATGTCACCCCTTTATGATGGCACTACAATGCC
TGACAATACGCACTACGAATGATGAGGTTTATATATTTAGGACCAAACAG
AGACTTATGTAATAACGTGTGCCAACCAACTGCATTGTAAGTACATAATT
TTGAGAAAGAATGGGCATTAGAACAGGCCTATTTTGGTTGTATAAATTCA
CACATAAATATCTTTTTTTGTATTAACACATGTATGTTTTTAATTTTTTT
CTTATAAGAACACAATTTAATTGGGGCTGGCTCAGAGGTTCAGTCTATTA
TCATCAAGGCAGGAACATAGTAGCATCCAGGCAGGCATGGTTCAGGAGGA
GCTGAGAGGACCACAACTTCATCTGAAGTCTGCTAGCAGAATACTGGTTT
CCAGGCAGCTAGGATAAGTGTCTTTAAGCCCACACCCACAGTGACACACA
CACACACACACACACACACACAGTGGCATATGGGTTGGGGACAGGTAGGC
AGGCTCCTTGTCTN

Query= MSMg01no545_j20.g1 MSMg01no545_j20.g1 CHROMAT_FILE:
MSMg01no545_j20.g1 PHD_FILE: MSMg01no545_j20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:38 2005
         (625 letters)



>mm_chr6_109001667_109002691
          Length = 1025

 Score = 1151 bits (595), Expect = 0.0
 Identities = 613/625 (98%), Gaps = 10/625 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctcacttgcaacatgaatgattcataaacaactgcaccattaaacatacacctgaccatt 60
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 ctcacttgcaacatgaatgattcataaacaactgcaccattaaatatacacctgaccatt 260

                                                                       
Query: 61  gtatgggcagctacactactgaagaatttcaactcgtgaatcatttacctctctctcttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtatgggcagctacactactgaagaatttcaactcgtgaatcatttacctctctctcttt 320

                                                                       
Query: 121 ttttcttttacatgtaatgcattatatttcatgtcacccctttatgatggcactacaatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttcttttacatgtaatgcattatatttcatgtcacccctttatgatggcactacaatg 380

                                                                       
Query: 181 cctgacaatacgcactacgaatgatgaggtttatatatttaggaccaaacagagacttat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctgacaatacgcactacgaatgatgaggtttatatatttaggaccaaacagagacttat 440

                                                                       
Query: 241 gtaataacgtgtgccaaccaactgcattgtaagtacataattttgagaaagaatgggcat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtaataacgtgtgccaaccaactgcattgtaagtacataattttgagaaagaatgggcat 500

                                                                       
Query: 301 tagaacaggcctattttggttgtataaattcacacataaatatctttttttgtattaaca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagaacaggcctattttggttgtataaattcacacataaatatctttttttgtattaaca 560

                                                                       
Query: 361 catgtatgtttttaatttttttcttataagaacacaatttaattggggctggctcagagg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catgtatgtttttaatttttttcttataagaacacaatttaattggggctggctcagagg 620

                                                                       
Query: 421 ttcagtctattatcatcaaggcaggaacatagtagcatccaggcaggcatggttcaggag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcagtctattatcatcaaggcaggaacatagtagcatccaggcaggcatggttcaggag 680

                                                                       
Query: 481 gagctgagaggaccacaacttcatctgaagtctgctagcagaatactggtttccaggcag 540
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gagctgagaggtccacaacttcatctgaagtctgctagcagaatactggtttccaggcag 740

                                                                       
Query: 541 ctaggataagtgtctttaagcccacacccacagtgacacacacacacacacacacacaca 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||      
Sbjct: 741 ctaggataagtgtctttaagcccacacccacagtgacacacacacacacacaca------ 794

                                    
Query: 601 cacagtggcatatgggttggggaca 625
               |||||||||||||||||||||
Sbjct: 795 ----gtggcatatgggttggggaca 815


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space:   624225
Effective search space used:   624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)