BAC Information

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BAC

Clone NameB6Ng01-005N02
Chromosome7 (Build37)
Map Location 15,865,714 - 15,866,351
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434123, 2810007J24Rik, EG638251, B430211C08Rik, EG194588, LOC666352, EG666312, LOC666365, LOC671978, LOC100042677, LOC100042685, EG666381, LOC100042691, LOC100042702, LOC100042707, LOC100042711, LOC100042714, LOC100042717, LOC100042721, LOC100042728, LOC100042731, LOC100042735, LOC100042739, LOC100042742, LOC235841
Downstream geneEG666407, LOC666337, Obox2, LOC100042753, LOC100042756, LOC100042758, EG545921, LOC100042762, Obox1, LOC100042765, Obox3, LOC100042771, Obox5, EG638338, Obox6, Crx, Crxos1, Sepw1, Gltscr2, Ehd2, Gltscr1, Zfp541, Napa, Kptn, Slc8a2, Mrg2, Dhx34, Gpr77, C5ar1, 2610014I16Rik, Ccdc9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005N02.bB6Ng01-005N02.g
ACCDH842852DH842853
length1,176638
definitionDH842852|Mus musculus domesticus DNA, BAC clone: B6Ng01-005N02, 5' end.DH842853|Mus musculus domesticus DNA, BAC clone: B6Ng01-005N02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaaccgaggaatagcgattgcctgagaagcagctgaaaaaatg
ttcaacatccttaatcatcatcgaaatgcaaatcaagacaaccctgagat
tctacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgcttgcgagaatgtggagaaagaggaacactcctttattgctggtg
ggattgtaaacttgtacaaccaatcttgaaatcagtctggcagttcatca
gaaaattggatatagtaatacttgaagatccagaaatacctctcatgggc
atgtacccagaagatgttccaactggtaataaggacacatgctccactat
gttctcagcagccttatttataatagacaggagctggaaagaaccaagag
atccctcaacagaggaatggataaagaaaatgtggtacatttacacaatg
tagtactgcagagctattataaacaatgaatttaggaaattcttcagcaa
atggatgggtctggaggatatcatcctgagagaggtaaaccaatcaaaaa
gaactcacatagtatgcactcactgataagtggatattagcccagaaact
tagaccatccaggaaacaatttgcaaaacatatgaaactcaagaagaagg
aagaacaaagtgtggatacttcgttcctacttagaatggggaataaaata
caaatggatgtaattacagagataaactttagagctgagttggaaggaag
gaccatgcagagtctgccctgactggggatccatcccataaacaaccacc
aatcactgacactattgcatatgccagcaagattttgctcacaggaccct
gatatagctgtttcttatgatgctatgccagtgcctggaaaatacagaat
ggatgctcacagtcatatattggatagacacaaggaccactatgacgagc
tagagaaagtacctaaggagctaaagggcctgccaccgcctataggtgac
tacactatgactcaccagtagccccagagctagtgtctctagtggtatgt
agcagagattgtcttattgacatcattgcagaagatgctttgggattgag
aagattatggctcccagacaggagaatgctaggatcaggtacggtaactg
aatagttagcatactaggatagcttc
gaattcacaatggaccaagcttgatgcaaaccacgtgaggctttattcag
agaaagccagagctctggggacgactcatatcccacacaggggtagatga
gttgacctcgaggggaaagaggtcccatttttataggccctcaggggaga
aaggagaagcgggaataggggatttcctgatctaaacaatgtctattctc
aagaaatgtagaattaaaacagagagaggatttagcaagttacagtaacc
ctctggattcctggtgagttggtgggctacatgaaatatttaaggttgct
gtgtgaaggggatgtcatggtggagccttggtaactttttgtagtttgta
tgggtttttgattggtgaagtctaaaacgtgccctgtgcataagcagaag
actgggtgtggtcacaaggtgtgaatgtctcctggctgtgagaggatgaa
aggtagagcctgtgctagggtccttttagggagattcatttaaggttatt
tgattttcttgaaattcaataaaagggggcatctgggttatttgtaagag
tcttctgatatccagggtaattatatgaccaatgctcttggatggatgag
tgtggaatgggatctattggacttgcctgttccctgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_15865714_15866351
seq2: B6Ng01-005N02.g_68_705

seq1  GAATTCACAATGGACCAAGCTTGATGCAAACCACGTGAGGCTTTATTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAATGGACCAAGCTTGATGCAAACCACGTGAGGCTTTATTCAG  50

seq1  AGAAAGCCAGAGCTCTGGGGACGACTCATATCCCACACAGGGGTAGATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCCAGAGCTCTGGGGACGACTCATATCCCACACAGGGGTAGATGA  100

seq1  GTTGACCTCGAGGGGAAAGAGGTCCCATTTTTATAGGCCCTCAGGGGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACCTCGAGGGGAAAGAGGTCCCATTTTTATAGGCCCTCAGGGGAGA  150

seq1  AAGGAGAAGCGGGAATAGGGGATTTCCTGATCTAAACAATGTCTATTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAAGCGGGAATAGGGGATTTCCTGATCTAAACAATGTCTATTCTC  200

seq1  AAGAAATGTAGAATTAAAACAGAGAGAGGATTTAGCAAGTTACAGTAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATGTAGAATTAAAACAGAGAGAGGATTTAGCAAGTTACAGTAACC  250

seq1  CTCTGGATTCCTGGTGAGTTGGTGGGCTACATGAAATATTTAAGGTTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGATTCCTGGTGAGTTGGTGGGCTACATGAAATATTTAAGGTTGCT  300

seq1  GTGTGAAGGGGATGTCATGGTGGAGCCTTGGTAACTTTTTGTAGTTTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAAGGGGATGTCATGGTGGAGCCTTGGTAACTTTTTGTAGTTTGTA  350

seq1  TGGGTTTTTGATTGGTGAAGTCTAAAACGTGCCCTGTGCATAAGCAGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTTTGATTGGTGAAGTCTAAAACGTGCCCTGTGCATAAGCAGAAG  400

seq1  ACTGGGTGTGGTCACAAGGTGTGAATGTCTCCTGGCTGTGAGAGGATGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGTGTGGTCACAAGGTGTGAATGTCTCCTGGCTGTGAGAGGATGAA  450

seq1  AGGTAGAGCCTGTGCTAGGGTCCTTTTAGGGAGATTCATTTAAGGTTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGAGCCTGTGCTAGGGTCCTTTTAGGGAGATTCATTTAAGGTTATT  500

seq1  TGATTTTCTTGAAATTCAATAAAAGGGGGCATCTGGGTTATTTGTAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTCTTGAAATTCAATAAAAGGGGGCATCTGGGTTATTTGTAAGAG  550

seq1  TCTTCTGATATCCAGGGTAATTATATGACCAATGCTCTTGGATGGATGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGATATCCAGGGTAATTATATGACCAATGCTCTTGGATGGATGAG  600

seq1  TGTGGAATGGGATCTATTGGACTTGCCTGTTCCATGGA  638
      ||||||||||||||||||||||||||||||||| ||||
seq2  TGTGGAATGGGATCTATTGGACTTGCCTGTTCCCTGGA  638