BAC Information

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BAC

Clone NameB6Ng01-007H13
Chromosome7 (Build37)
Map Location 72,575,142 - 72,576,145
singlet/doubletsinglet
Overlap genenone
Upstream geneApba2, 5730507A09Rik, Ndnl2, Tjp1
Downstream geneGm1693, EG665234, Tarsl2, Tm2d3, LOC665241, Pcsk6, Snrpa1, H47, Chsy1, Lrrk1, Aldh1a3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007H13.bB6Ng01-007H13.g
ACCDH844031DH844032
length999155
definitionDH844031|Mus musculus domesticus DNA, BAC clone: B6Ng01-007H13, 5' end.DH844032|Mus musculus domesticus DNA, BAC clone: B6Ng01-007H13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacagaaatcctaccccagcctcccaactattaggcttactggaa
atatccattacccctggcccagatggacctttaccaagctgcccacgcta
aagagacttctggttcatctcatgccatctgatgccccagaaaacctgtg
tgccctgaccaactactgttgagggatttcacttggaattaaaggtctct
tccatccacgcgcacaaagcctgccttgggacctaacttccttgaggctg
ggtctgttttcttaagcttaagaagtttgcaattgaggatctctgggaac
agcttgaggacttgttccttgctggggaatgtcgggaatgcggagcattc
actcttgactcagaggtgaacctcctggcttttgttccttgccttgggaa
gctgacttacagaatctaggagcgcgggcctcactcatggttgcagcaga
gaaacgctgtccagtcccgtctccttttcatcctaggatcttttattctg
ttaaagcctttgagtaaaaagaccaaatggaaaaggagaaactgtgtttt
tctaagagtctcctgttctaattctagctaattcaggatagagcttcttt
gtaattaaaacaaagcaaagaaactctatagtagtaaaaggaattgctga
tctgatgccaaacttttatagaccttttggagtttgtggatattattaat
caaatatttacagctcaggcatatgaaggaaagacattttcacatgaagc
ttccgtaggcttctgtgctaagtcgtaaagttgccacagctgtggcactc
tcatatgacgccacgagtaagtgaacaccttcagaattaggaaacttttc
aaggttgtcggtgaattcattattgagaggtcctccctccaacaggcttt
tttattgactgttaacaatgagatttgggcctggggcgtgactagcgaca
cagttgaatcagtggtcattaacccctccacctcccacccagtgtgtgc
aagaaaatggccctaggggccactcccccattgggtctggggtagtagag
atgaaatgttgatttagcaagttgactcaggaaagttggaggggagaatg
tatgctagcccagctttgagctaatcaaagcatatcaaaattagctggtg
tgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_72575142_72576145
seq2: B6Ng01-007H13.b_34_1032

seq1  GAATTCACAGAAATCCTACCCCAGCCTCCCAACTATTAGGCTTACTGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGAAATCCTACCCCAGCCTCCCAACTATTAGGCTTACTGGAA  50

seq1  ATATCCATTACCCCTGGCCCAGATGGACCTTTACCAAGCTGCCCACGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCATTACCCCTGGCCCAGATGGACCTTTACCAAGCTGCCCACGCTA  100

seq1  AAGAGACTTCTGGTTCATCTCATGCCATCTGATGCCCCAGAAAACCTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACTTCTGGTTCATCTCATGCCATCTGATGCCCCAGAAAACCTGTG  150

seq1  TGCCCTGACCAACTACTGTTGAGGGATTTCACTTGGAATTAAAGGTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTGACCAACTACTGTTGAGGGATTTCACTTGGAATTAAAGGTCTCT  200

seq1  TCCATCCACGCGCACAAAGCCTGCCTTGGGACCTAACTTCCTTGAGGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCACGCGCACAAAGCCTGCCTTGGGACCTAACTTCCTTGAGGCTG  250

seq1  GGTCTGTTTTCTTAAGCTTAAGAAGTTTGCAATTGAGGATCTCTGGGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTTTTCTTAAGCTTAAGAAGTTTGCAATTGAGGATCTCTGGGAAC  300

seq1  AGCTTGAGGACTTGTTCCTTGCTGGGGAATGTCGGGAATGCGGAGCATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGAGGACTTGTTCCTTGCTGGGGAATGTCGGGAATGCGGAGCATTC  350

seq1  ACTCTTGACTCAGAGGTGAACCTCCTGGCTTTTGTTCCTTGCCTTGGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGACTCAGAGGTGAACCTCCTGGCTTTTGTTCCTTGCCTTGGGAA  400

seq1  GCTGACTTACAGAATCTAGGAGCGCGGGCCTCACTCATGGTTGCAGCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTTACAGAATCTAGGAGCGCGGGCCTCACTCATGGTTGCAGCAGA  450

seq1  GAAACGCTGTCCAGTCCCGTCTCCTTTTCATCCTAGGATCTTTTATTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACGCTGTCCAGTCCCGTCTCCTTTTCATCCTAGGATCTTTTATTCTG  500

seq1  TTAAAGCCTTTGAGTAAAAAGACCAAATGGAAAAGGAGAAACTGTGTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCCTTTGAGTAAAAAGACCAAATGGAAAAGGAGAAACTGTGTTTT  550

seq1  TCTAAGAGTCTCCTGTTCTAATTCTAGCTAATTCAGGATAGAGCTTCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGAGTCTCCTGTTCTAATTCTAGCTAATTCAGGATAGAGCTTCTTT  600

seq1  GTAATTAAAACAAAGCAAAGAAACTCTATAGTAGTAAAAGGAATTGCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTAAAACAAAGCAAAGAAACTCTATAGTAGTAAAAGGAATTGCTGA  650

seq1  TCTGATGCCAA--CTTTATAGACCTTTTGGAGTTTGTGGATATTATTAAT  698
      |||||||||||   ||||||||||||||||||||||||||||||||||||
seq2  TCTGATGCCAAACTTTTATAGACCTTTTGGAGTTTGTGGATATTATTAAT  700

seq1  CAAATATTTACAGCTCAGGCATATGAAGGAAAGACATTTTCACATGAAGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATTTACAGCTCAGGCATATGAAGGAAAGACATTTTCACATGAAGC  750

seq1  TT-CGTAGGCTTCTGTGCTAAGTCGTAAAGTTGCCACAGCTGTGGCACTC  797
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGTAGGCTTCTGTGCTAAGTCGTAAAGTTGCCACAGCTGTGGCACTC  800

seq1  TCATATGACGCCACGAGTAAAGTGAACACCCTCAGAATTAGGAAACTTTT  847
      |||||||||||||||||| ||||||||||| |||||||||||||||||||
seq2  TCATATGACGCCACGAGT-AAGTGAACACCTTCAGAATTAGGAAACTTTT  849

seq1  CAAAGGTGGTCGGGTGAATTCAATTATTGAGAGGT-CTCCCTCAAACAAG  896
      | ||||| ||| ||||||||| ||||||||||||| ||||||| ||| ||
seq2  C-AAGGTTGTC-GGTGAATTC-ATTATTGAGAGGTCCTCCCTCCAAC-AG  895

seq1  GCTTTTTTATTGACTGTTAACAAGGAGAATTTGGGCTGGGGGCGTGACTA  946
      ||||||||||||||||||||||| ||| ||||||||  ||||||||||| 
seq2  GCTTTTTTATTGACTGTTAACAATGAG-ATTTGGGCCTGGGGCGTGACT-  943

seq1  AGCGACACAGGTTGAATCAGGTGGCAATTTAACCCCTCCACC-CCCACCC  995
      ||||||||| ||||||||||  | ||  |||||||||||||| |||||||
seq2  AGCGACACA-GTTGAATCAGTGGTCA--TTAACCCCTCCACCTCCCACCC  990

seq1  AGTGTGTGC  1004
      |||||||||
seq2  AGTGTGTGC  999