BAC Information

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BAC

Clone NameB6Ng01-008N24
Chromosome7 (Build37)
Map Location 55,277,533 - 55,429,729
singlet/doubletdoublet
Overlap geneMrgprx1, Mrgprb7-ps, Mrgprb12-ps, EG270335, Mrgprb5
Upstream geneTmem86a, Ptpn5, LOC100041710, Mrgpra6, EG668725, Gm660, Mrgpra1, LOC668846, LOC100040217, LOC668727, Mrgpra2, LOC638950, Mrgprc4-ps, LOC677457, EG668729, Mrgpra3, Mrgprc1-ps, LOC100040314, Mrgprc3-ps, EG435977, EG619792, Mrgprc7-ps, Mrgpra18-ps, EG435978, Mrgprc2-ps, Mrgpra4
Downstream geneMrgprb4, Mrgprb13, Mrgprb8, Mrgprb1, Mrgprx2, Mrgprb2, Mrgprb9-ps, Mrgprb3, EG639116, Zdhhc13, Csrp3, E2f8, LOC100040465, 9130015G15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008N24.bB6Ng01-008N24.g
ACCDH844981DH844982
length1,086928
definitionDH844981|Mus musculus domesticus DNA, BAC clone: B6Ng01-008N24, 5' end.DH844982|Mus musculus domesticus DNA, BAC clone: B6Ng01-008N24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(55,428,641 - 55,429,729)(55,277,533 - 55,278,411)
sequence
gaattccacattggatggtgatgctacatcacaccatgcaaacatatatt
caaactgtgatataacataagcagatatagaacttattcttccttcccct
gtctactcaagttacccaatgtgatggggctgcttactctaagagttaat
ggagggcacagcctcagcatggatttctgctccctaagaagatgatgtct
ttccttctgaaagtctgctgttttggtggctgttctgtactctgaagctg
tatttgtttaaattcagtaaagaaaccctggatcgtgatggttgataaga
gcattgactttggaggacaggttaggcagaaataggagaccagttactgt
gattccaggctggcctcagactccgtaggtcatggagaaaaatcatgaac
ttctgatcttccagattctacctactgagcactagtgttacgggtaaaca
ctatcttacccacatttctgctgactgtagctgatgtccactgccgccat
ccttagccccatttgatgcttcttccctgctagttcacaagttctcattc
atcctcaattctgattgccatcttgttaatagtgggtgtatgtcccctgt
gttttctttactactttccagttcacacagtgttgtagtgtgagaagaga
ttaacaagagattaatcctttccaggttagctatcttaatctagtaatta
ttattattattattttgaattttcaaaacagtgtttccctgtatagccct
ggacgtcctggaacttactctgtagaccaggctggcttcgaactcataaa
tctgcctgcttctgccacccaaatgctgggattaaaggcatgtgcacatt
attgctgtacaagcatgagaatgtgtactccagcttccagaataatactg
gcctagaaaggcatgtccatcacttcagtgctgaaaatacagataccaga
agatccctcagtgtctgctttttagtctttgagctccatattcaaagaaa
tccctgtcttcaaaaaatagctagatgatcattggaaggaaattgatgtt
aacatgtagctttctacacacctgtgtgcacctctg
gaattctggtctgtggattcaaattcagagcttgtgtatactctgtagtc
tgggtcatacttcctgtgtataactcaggacctttaaaacacatggaaat
gattcccttctctcatggtcagggttggatccatttcctgctcccctgct
aattccagaaagggaagcatcacatttgcctccgcagggcttaaaaaaaa
cacagaaaagacaaagatctcatggtttgtttgaggggcactaagtaagg
gaaagatacttttgcatggtcaaaagaatggatgatgagttctaccccta
actctgggtagagacatgattttagtctgctcagcaggttacaaatcaca
tgcatttatctcctcccttgagttgaccaatgtggggtattgggctatct
atacacagacaggctggtctccagttgagctgagatataacccagggacc
cggtggtgataatttgcttacatgggatggaaggagttctctcatgctcc
tggaactctggcccctgcctaagttaccaccccccacagctcccacaaga
gaagcatggctagaagtcacataggcaatgtcacaagcttctgaccttca
ggctaaactcctccccggttacctagcaacagaaaatatagcagcatact
ttaaaaggggctgtttggcccccccttgctttctttcactcctctcactc
tcactcccatctcttctctttttcttctcctctcctcttctcttactctc
taactctctctttctctctagcctttcttctctctctctcttttaccttc
tctctttcccccctcctttctataataaagctctaaaaccatggactgtc
tctgttcatcaaggatgcttggatgatgggataggctttctcctatgagc
tgtttctaatctccagatggaaggcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_55428641_55429729
seq2: B6Ng01-008N24.b_46_1131 (reverse)

seq1  CAGAGGGTGCACACAGGTGTTTGTAG-AAGCTACATGTTAACATCAAATT  49
      |||| ||||||||||||||  ||||| |||||||||||||||||||| ||
seq2  CAGA-GGTGCACACAGGTG--TGTAGAAAGCTACATGTTAACATCAATTT  47

seq1  TCCTCCAATAGATCA-CTAGCTTATTTTTTG-AGACAGGGGTTTTCTTTG  97
       | |||||| ||||| ||||| ||||||||| ||||| ||| ||||||||
seq2  CCTTCCAAT-GATCATCTAGC-TATTTTTTGAAGACA-GGGATTTCTTTG  94

seq1  AATATGGAGCTCAAAGACTAAATAGCAGACACTGAGGGATCTTCTGGTAT  147
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AATATGGAGCTCAAAGACTAAAAAGCAGACACTGAGGGATCTTCTGGTAT  144

seq1  CTGTATTTTCAGCACTGAAGTGATGGACATGCCTTTCTAGGCCAGTATTA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTTTCAGCACTGAAGTGATGGACATGCCTTTCTAGGCCAGTATTA  194

seq1  TTCTGGAAGCTGGAGTACACATTCTCATGCTTGTACAGCAATAATGTGCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAAGCTGGAGTACACATTCTCATGCTTGTACAGCAATAATGTGCA  244

seq1  CATGCCTTTAATCCCAGCATTTGGGTGGCAGAAGCAGGCAGATTTATGAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTTTAATCCCAGCATTTGGGTGGCAGAAGCAGGCAGATTTATGAG  294

seq1  TTCGAAGCCAGCCTGGTCTACAGAGTAAGTTCCAGGACGTCCAGGGCTAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAAGCCAGCCTGGTCTACAGAGTAAGTTCCAGGACGTCCAGGGCTAT  344

seq1  ACAGGGAAACACTGTTTTGAAAATTCAAAATAATAATAATAATAATTACT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGAAACACTGTTTTGAAAATTCAAAATAATAATAATAATAATTACT  394

seq1  AGATTAAGATAGCTAACCTGGAAAGGATTAATCTCTTGTTAATCTCTTCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAAGATAGCTAACCTGGAAAGGATTAATCTCTTGTTAATCTCTTCT  444

seq1  CACACTACAACACTGTGTGAACTGGAAAGTAGTAAAGAAAACACAGGGGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTACAACACTGTGTGAACTGGAAAGTAGTAAAGAAAACACAGGGGA  494

seq1  CATACACCCACTATTAACAAGATGGCAATCAGAATTGAGGATGAATGAGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACCCACTATTAACAAGATGGCAATCAGAATTGAGGATGAATGAGA  544

seq1  ACTTGTGAACTAGCAGGGAAGAAGCATCAAATGGGGCTAAGGATGGCGGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTGAACTAGCAGGGAAGAAGCATCAAATGGGGCTAAGGATGGCGGC  594

seq1  AGTGGACATCAGCTACAGTCAGCAGAAATGTGGGTAAGATAGTGTTTACC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGACATCAGCTACAGTCAGCAGAAATGTGGGTAAGATAGTGTTTACC  644

seq1  CGTAACACTAGTGCTCAGTAGGTAGAATCTGGAAGATCAGAAGTTCATGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAACACTAGTGCTCAGTAGGTAGAATCTGGAAGATCAGAAGTTCATGA  694

seq1  TTTTTCTCCATGACCTACGGAGTCTGAGGCCAGCCTGGAATCACAGTAAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTCCATGACCTACGGAGTCTGAGGCCAGCCTGGAATCACAGTAAC  744

seq1  TGGTCTCCTATTTCTGCCTAACCTGTCCTCCAAAGTCAATGCTCTTATCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTCCTATTTCTGCCTAACCTGTCCTCCAAAGTCAATGCTCTTATCA  794

seq1  ACCATCACGATCCAGGGTTTCTTTACTGAATTTAAACAAATACAGCTTCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCACGATCCAGGGTTTCTTTACTGAATTTAAACAAATACAGCTTCA  844

seq1  GAGTACAGAACAGCCACCAAAACAGCAGACTTTCAGAAGGAAAGACATCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACAGAACAGCCACCAAAACAGCAGACTTTCAGAAGGAAAGACATCA  894

seq1  TCTTCTTAGGGAGCAGAAATCCATGCTGAGGCTGTGCCCTCCATTAACTC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTAGGGAGCAGAAATCCATGCTGAGGCTGTGCCCTCCATTAACTC  944

seq1  TTAGAGTAAGCAGCCCCATCACATTGGGTAACTTGAGTAGACAGGGGAAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGTAAGCAGCCCCATCACATTGGGTAACTTGAGTAGACAGGGGAAG  994

seq1  GAAGAATAAGTTCTATATCTGCTTATGTTATATCACAGTTTGAATATATG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATAAGTTCTATATCTGCTTATGTTATATCACAGTTTGAATATATG  1044

seq1  TTTGCATGGTGTGATGTAGCATCACCATCCAATGTGGAATTC  1089
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATGGTGTGATGTAGCATCACCATCCAATGTGGAATTC  1086

seq1: chr7_55277533_55278411
seq2: B6Ng01-008N24.g_68_946

seq1  GAATTCTGGTCTGTGGATTCAAATTCAGAGCTTGTGTATACTCTGTAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGTCTGTGGATTCAAATTCAGAGCTTGTGTATACTCTGTAGTC  50

seq1  TGGGTCATACTTCCTGTGTATAACTCAGGACCTTTAAAACACATGGAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCATACTTCCTGTGTATAACTCAGGACCTTTAAAACACATGGAAAT  100

seq1  GATTCCCTTCTCTCATGGTCAGGGTTGGATCCATTTCCTGCTCCCCTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCCTTCTCTCATGGTCAGGGTTGGATCCATTTCCTGCTCCCCTGCT  150

seq1  AATTCCAGAAAGGGAAGCATCACATTTGCCTCCGCAGGGCTTAAAAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCAGAAAGGGAAGCATCACATTTGCCTCCGCAGGGCTTAAAAAAAA  200

seq1  CACAGAAAAGACAAAGATCTCATGGTTTGTTTGAGGGGCACTAAGTAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAAAGACAAAGATCTCATGGTTTGTTTGAGGGGCACTAAGTAAGG  250

seq1  GAAAGATACTTTTGCATGGTCAAAAGAATGGATGATGAGTTCTACCCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATACTTTTGCATGGTCAAAAGAATGGATGATGAGTTCTACCCCTA  300

seq1  ACTCTGGGTAGAGACATGATTTTAGTCTGCTCAGCAGGTTACAAATCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGGGTAGAGACATGATTTTAGTCTGCTCAGCAGGTTACAAATCACA  350

seq1  TGCATTTATCTCCTCCCTTGAGTTGACCAATGTGGGGTATTGGGCTATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTATCTCCTCCCTTGAGTTGACCAATGTGGGGTATTGGGCTATCT  400

seq1  ATACACAGACAGGCTGGTCTCCAGTTGAGCTGAGATATAACCCAGGGACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACAGACAGGCTGGTCTCCAGTTGAGCTGAGATATAACCCAGGGACC  450

seq1  CGGTGGTGATAATTTGCTTACATGGGATGGAAGGAGTTCTCTCATGCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGGTGATAATTTGCTTACATGGGATGGAAGGAGTTCTCTCATGCTCC  500

seq1  TGGAACTCTGGCCCCTGCCTAAGTTACCACCCCCCACAGCTCCCACAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTCTGGCCCCTGCCTAAGTTACCACCCCCCACAGCTCCCACAAGA  550

seq1  GAAGCATGGCTAGAAGTCACATAGGCAATGTCACAAGCTTCTGACCTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCATGGCTAGAAGTCACATAGGCAATGTCACAAGCTTCTGACCTTCA  600

seq1  GGCTAAACTCCTCCCCGGTTACCTAGCAACAGAAAATATAGCAGCATACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAACTCCTCCCCGGTTACCTAGCAACAGAAAATATAGCAGCATACT  650

seq1  TTAAAAGGGGCTGTTTGGCCCCCCCTTGCTTTCTTTCACTCCTCTCACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGGGGCTGTTTGGCCCCCCCTTGCTTTCTTTCACTCCTCTCACTC  700

seq1  TCACTCCCATCTCTTCTCTTTTTCTTCTCCTCTCCTCTTCTCTTACTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCCCATCTCTTCTCTTTTTCTTCTCCTCTCCTCTTCTCTTACTCTC  750

seq1  TAACTCTCTCTTTCTCTCTAGCCTTTCTTCTCTCTCTCTCTTTTACCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCTCTCTTTCTCTCTAGCCTTTCTTCTCTCTCTCTCTTTTACCTTC  800

seq1  TCTCTTTCCCCCCTCCTTTCTATAATAAAGCTCTAAAACCATGGACTGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCCCCCCTCCTTTCTATAATAAAGCTCTAAAACCATGGACTGTC  850

seq1  TCTGTTCATCAAGGATGCTTGGATGATGG  879
      |||||||||||||||||||||||||||||
seq2  TCTGTTCATCAAGGATGCTTGGATGATGG  879