BAC Information

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BAC

Clone NameB6Ng01-010H14
Chromosome7 (Build37)2 (Build37)
Map Location 30,754,530 - 30,754,92694,430,785 - 94,431,296
singlet/doubletsingletsinglet
Overlap geneLOC625437, LOC100043796
Upstream geneEif3s12, Map4k1, Ryr1, Rasgrp4, 1110006G06Rik, Spred3, Ggn, Psmd8, A230107C01Rik, Kcnk6, Yif1b, Spint2, Ppp1r14a, Neud4, Sipa1l3, LOC100043791, 4932431P20Rik, 4930432E11Rik, 1700067C01Rik, Zfp84, LOC100043794, Zfp30, EG625349, 6330581L23Rik, BC027344, Zfp420, Zfp27, Zfp74
Downstream geneZfp568, Zfp14, LOC100043798, Zfp82, Zfp566, Zfp260, Zfp382, Zfp146, EG330503, Cox7a1, Capns1, Tbcb, Polr2i, Ovol3, Wdr62, EG668354, 1700020L13Rik, Clip3, Alkbh6, AI428936, 0610010E21Rik, Lrfn3, Tyrobp, Hcst, AY078069, Aplp1, Kirrel2, Nphs1, LOC100034728, Prodh2, Gm1082, Snx26, BC053749, Hspb6, 1810054G18Rik, Psenen, U2af1l4, Tmem149, Wbp7, Zbtb32, Upk1a, Cox6b1, Etv2, 3100004P22Rik, 2310022K01Rik, 4930479M11Rik, 2200002J24Rik, EG233075, Atp4a, Tmem147, Gapdhs, Sbsn, Dmkn, Krtdap, Ffar2, Ffar3, Ffar1, Cd22, Mag, Hamp2, Usf2-ps1, Hamp1, Usf2, LOC100043823, Lsr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010H14.bB6Ng01-010H14.g
ACCDH846134DH846135
length391891
definitionDH846134|Mus musculus domesticus DNA, BAC clone: B6Ng01-010H14, 5' end.DH846135|Mus musculus domesticus DNA, BAC clone: B6Ng01-010H14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(30,754,530 - 30,754,926)(94,430,785 - 94,431,296)
sequence
acgtcgggaagtcactcctaccacccagtccaggcagtcaccaagcccta
taaatgccatcttctaagtatttctggaatttatgttcttttctctgatt
ttagtgttgattacaactatacagttttcatgggttttctaccgtctact
attactatcttcaaatcttttttccgtaatatgcaaaaaattatttttac
tttgacgtgggatgttgtgtagtacaagctggccttagactcacatgtac
aaaatagaaaacccagctgggcagtggtggcgcacgcctttaatcccagc
actcaggaggcagaggcaggcagatttctgatttccaggccagcctggtc
tacagagtgagttccaggacagccagggctacacagagaaa
gaattcacacaggcgagaagccctatgaatgtaaggagtgtgggatggcc
ttcaggcagacggcccaccttaccaggcaccagagactgcattctggtga
aaaactgtatgaatgcaaggagtgtgggcaagctttcatatacggccccg
agctcagagcacatcagaagcttcacaccggcgagaagccctacacgtgt
agagaatgtgggaaagccttcagggtacggggacaactcactctccatca
gaggatccatactggggagaagccctatgtgtgtcaggagtgtgggaagg
ccttcaggcagttggcgcacctcactcgccatcagaagcttaatgtcgtc
gacagactgtacgagtgtaaagagtgtgggaaagactttttgtgtggctc
tggccttagagtacatcacaaacttcacactggtgagaaaccctatgagt
gcaaggactgtgggaaggcgtttagagttcgacagcagctaacgctccat
cagaggagtcatactggggagaagccctatgagtgcactgagtgtgggaa
gacctttagtcggggctaccatcttattctccatcacagaatccatactg
gagaaaagccttacgaatgcaaggagtgctggaaggcgttcagtcgctac
tcacagcttatttcgcatcagagcatccatattggggttaaaccctatga
ctgcaaggactgtgggaaagccttcagactcctctctcagctcacacagc
atcagagtgttcatgccggggagaagccttactcttgtaaggaatgcggg
aagtctttcagattgcgtcagaacttgctctccaccagagtattcatact
ggcgaaaagccctttgagtgcaaagaatgtaggagggcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_30754530_30754926
seq2: B6Ng01-010H14.b_47_443

seq1  GAATTCACGTCGGGAAGTCACTCCTACCACCCAGTCCAGGCAGTCACCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACGTCGGGAAGTCACTCCTACCACCCAGTCCAGGCAGTCACCAA  50

seq1  GCCCTATAAATGCCATCTTCTAAGTATTTCTGGAATTTATGTTCTTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTATAAATGCCATCTTCTAAGTATTTCTGGAATTTATGTTCTTTTCT  100

seq1  CTGATTTTAGTGTTGATTACAACTATACAGTTTTCATGGGTTTTCTACCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTTAGTGTTGATTACAACTATACAGTTTTCATGGGTTTTCTACCG  150

seq1  TCTACTATTACTATCTTCAAATCTTTTTTCCGTAATATGCAAAAAATTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTATTACTATCTTCAAATCTTTTTTCCGTAATATGCAAAAAATTAT  200

seq1  TTTTACTTTGACGTGGGATGTTGTGTAGTACAAGCTGGCCTTAGACTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTTTGACGTGGGATGTTGTGTAGTACAAGCTGGCCTTAGACTCAC  250

seq1  ATGTACAAAATAGAAAACCCAGCTGGGCAGTGGTGGCGCACGCCTTTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACAAAATAGAAAACCCAGCTGGGCAGTGGTGGCGCACGCCTTTAAT  300

seq1  CCCAGCACTCAGGAGGCAGAGGCAGGCAGATTTCTGAGTTCCAGGCCAGC  350
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CCCAGCACTCAGGAGGCAGAGGCAGGCAGATTTCTGATTTCCAGGCCAGC  350

seq1  CTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAA  397
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAA  397

seq1: chr2_94430785_94431296
seq2: B6Ng01-010H14.g_275_786 (reverse)

seq1  AGGCTTTCCCACATTCCTTATAGTCTTAGGGTTTAATCCCAATAGGGATA  50
      ||||||||||||| |||||  |||| |||||||||| ||||||| |||| 
seq2  AGGCTTTCCCACAGTCCTTGCAGTCATAGGGTTTAACCCCAATATGGATG  50

seq1  TTCTGATGC-AAATAAGCTGTGAGTAGCGACTGAACTGCCTTCCAGCACT  99
       |||||||| |||||||||||||||||||||||||| |||||||||||||
seq2  CTCTGATGCGAAATAAGCTGTGAGTAGCGACTGAAC-GCCTTCCAGCACT  99

seq1  CCTTGCATTCCTAAGGCTTTTCTCCAGGATGGATTCTGTGTTGGAGAATA  149
      |||||||||| |||||||||||||||| |||||||||||| |||||||| 
seq2  CCTTGCATTCGTAAGGCTTTTCTCCAGTATGGATTCTGTGATGGAGAAT-  148

seq1  AAGATGATAGCCCAGACAAAAGGTCTTCCCACACTCATTGCACTCATAGT  199
      |||||| |||||| ||| ||||||||||||||||||| ||||||||||| 
seq2  AAGATGGTAGCCCCGACTAAAGGTCTTCCCACACTCAGTGCACTCATAGG  198

seq1  GCTTCTCCACAGAACGAATTCTCTGATGGAGCGTTAGCTGCTGTCGAACT  249
      |||||||| ||| | || | ||||||||||||||||||||||||||||||
seq2  GCTTCTCCCCAGTATGACTCCTCTGATGGAGCGTTAGCTGCTGTCGAACT  248

seq1  CTAAACGCCTTCCCACAGTCCTTGCACTCATAGGGTTTCTCACCAGTGGG  299
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTAAACGCCTTCCCACAGTCCTTGCACTCATAGGGTTTCTCACCAGTGTG  298

seq1  AAGTTTGTGATGTACTCTAAGGCCAGAGCCACACAAAAAGTCTTTCCCAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGTGATGTACTCTAAGGCCAGAGCCACACAAAAAGTCTTTCCCAC  348

seq1  ACTCTTTACACTCATACAGTCTGTCAGCAACATTAAGCTTCTGATGGCGA  399
      ||||||||||||| |||||||||||  | |||||||||||||||||||||
seq2  ACTCTTTACACTCGTACAGTCTGTCGACGACATTAAGCTTCTGATGGCGA  398

seq1  GTGAGGTGCGCCAACTGCCTGAAGGCCTTCCCACACTCTTGACACACATA  449
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GTGAGGTGCGCCAACTGCCTGAAGGCCTTCCCACACTCCTGACACACATA  448

seq1  GGGCTTCTCCCCAGTATGGATCCTCTGATGGAGAGTAAGTTGGTCCCGT-  498
      |||||||||||||||||||||||||||||||||||| |||||  ||||| 
seq2  GGGCTTCTCCCCAGTATGGATCCTCTGATGGAGAGTGAGTTGTCCCCGTA  498

seq1  CCCTGAAGGCTTTC  512
      ||||||||||||||
seq2  CCCTGAAGGCTTTC  512