BAC Information

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BAC

Clone NameB6Ng01-011B03
Chromosome7 (Build37)
Map Location 61,348,783 - 61,475,559
singlet/doubletdoublet
Overlap genenone
Upstream geneGm1865, LOC100040718, LOC668789
Downstream geneMrps33p, LOC622146, Luzp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011B03.bB6Ng01-011B03.g
ACCDH846558DH846559
length1,080410
definitionDH846558|Mus musculus domesticus DNA, BAC clone: B6Ng01-011B03, 5' end.DH846559|Mus musculus domesticus DNA, BAC clone: B6Ng01-011B03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,348,783 - 61,349,871)(61,475,146 - 61,475,559)
sequence
gaattctgtcagagcaaaaattgcactaggtggaggtaaacagaaatggg
cctacttattttgaccagtagcaatgggaagaaatctgaggtcacccatg
taaagtgaagggcaaggtagtgggaaagcactgagtgccagtggaaccag
gagaagcacaccccagcactctgttttttttttttttttctatgaaaact
tcatatctagtggattatggactgtcctaagacactttaaaattctcagt
tcttctttggagacccatcatcaaatagaatcacatatgctatttggact
tcagcttttgagtttattgggaatataatctagtccacagtacatacttc
tgatcaaaatcagaaataacagtgtaaataatactatcaaccatatagga
gtagaagctttcaatagaaatgagtgaaattgtgcctgcccagtgccttc
acatggtaagtttactttgactctgcaggatggtatcagcttttgttatg
taaacttctagagagaaatactttcataaaagaaattgtaacattacagt
tatcatccacctgaataatgtaaaaatctagtatgaaaaggcaatgtagg
aacattgatatcataacaataggagaaataaatgcacacagagcaagtaa
ttatctttagaactgttgaaggcaaaagtgtaaccatagagcaaattcaa
ctaaaaatggtactgataatatacatatttagaactggctgaggggggaa
acataattaaaaatgaaaactttcttgggtattctaagtttctgggctaa
tatccacttatcagtgagtacatatcatttgagttcttttgtgattggga
tacctcactcaggatgatgccctccaggtccaaccatttggtgaggaatt
tcgtaaattcattctttttaatagctgagtagtactccattgtgtaaatg
taccacattttttgtatccattcctctgtgaggggcatctgggttctttc
cagcttctgctattataataagctgctatgaacaaagtgagcatgtttct
ttctaatagtgaacatcttctgatataagc
ctcagttggtagcttcatccagccttgatataagagttggtgtctaatct
tattgcatattgtttgtttgctatccctgggaggcctgctcttttttgaa
gagaaacagaaaaatgaatcaggggagagggtagtttggagtcaaaggaa
gaatgggactgttgtagggaggcaacactgtggtctcaatgtaaagaata
acacataacacaaaaaaaaaagaaaagaaaagtaaaaactgcaaagacag
catagaaaaacaagattgttggttcttttgtttgtttgtttgtttgtttg
tttggtttttgttttttttgtttttttgtttgttgttgttttgttttgtt
ttgttttgttggagactaaagcattattaaagcctaaagaagtctggggg
gggagtaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_61348783_61349871
seq2: B6Ng01-011B03.b_46_1125

seq1  GAATTCTGTCAGAGCAAAAATTGCACTAGGTGGAGGTAAACAGAAATGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCAGAGCAAAAATTGCACTAGGTGGAGGTAAACAGAAATGGG  50

seq1  CCTACTTATTTTGACCAGTAGCAATGGGAAGAAATCTGAGGTCACCCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTTATTTTGACCAGTAGCAATGGGAAGAAATCTGAGGTCACCCATG  100

seq1  TAAAGTGAAGGGCAAGGTAGTGGGAAAGCACTGAGTGCCAGTGGAACCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTGAAGGGCAAGGTAGTGGGAAAGCACTGAGTGCCAGTGGAACCAG  150

seq1  GAGAAGCACACCCCAGCACTCTGTTTTTTTTTTTTTTTTCTATGAAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCACACCCCAGCACTCTGTTTTTTTTTTTTTTTTCTATGAAAACT  200

seq1  TCATATCTAGTGGATTATGGACTGTCCTAAGACACTTTAAAATTCTCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATCTAGTGGATTATGGACTGTCCTAAGACACTTTAAAATTCTCAGT  250

seq1  TCTTCTTTGGAGACCCATCATCAAATAGAATCACATATGCTATTTGGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTGGAGACCCATCATCAAATAGAATCACATATGCTATTTGGACT  300

seq1  TCAGCTTTTGAGTTTATTGGGAATATAATCTAGTCCACAGTACATACTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTTTGAGTTTATTGGGAATATAATCTAGTCCACAGTACATACTTC  350

seq1  TGATCAAAATCAGAAATAACAGTGTAAATAATACTATCAACCATATAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAAAATCAGAAATAACAGTGTAAATAATACTATCAACCATATAGGA  400

seq1  GTAGAAGCTTTCAATAGAAATGAGTGAAATTGTGCCTGCCCAGTGCCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAGCTTTCAATAGAAATGAGTGAAATTGTGCCTGCCCAGTGCCTTC  450

seq1  ACATGGTAAGTTTACTTTGACTCTGCAGGATGGTATCAGCTTTTGTTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTAAGTTTACTTTGACTCTGCAGGATGGTATCAGCTTTTGTTATG  500

seq1  TAAACTTCTAGAGAGAAATACTTTCATAAAAGAAATTGTAACATTACAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTCTAGAGAGAAATACTTTCATAAAAGAAATTGTAACATTACAGT  550

seq1  TATCATCCACCTGAATAATGTAAAAATCTAGTATGAAAAGGCAATGTAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATCCACCTGAATAATGTAAAAATCTAGTATGAAAAGGCAATGTAGG  600

seq1  AACATTGATATCATAACAATAGGAGAAATAAATGCACACAGAGCAAGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGATATCATAACAATAGGAGAAATAAATGCACACAGAGCAAGTAA  650

seq1  TTATCTTTAGAACTGTTGAAGGCAAAAGTGTAACCATAGAGCAAATTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTTAGAACTGTTGAAGGCAAAAGTGTAACCATAGAGCAAATTCAA  700

seq1  CTAAAAATGGTACTGATAATATACATATTTAGAACTGGCTGAGGGGGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAATGGTACTGATAATATACATATTTAGAACTGGCTGAGGGGGGAA  750

seq1  ACATAATTAAAAATGAAAACTTTCTTGGGTATTCTAAGTTTCTGGGCTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATTAAAAATGAAAACTTTCTTGGGTATTCTAAGTTTCTGGGCTAA  800

seq1  TATCCACTTATCAGTGAGTACATATCATTTGAGTTCTTTTGTGATTGGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCACTTATCAGTGAGTACATATCATTTGAGTTCTTTTGTGATTGGGA  850

seq1  TACCTCACTCAGGATGATGCCCTCCAGGTCCAACCATTTGGTGAGGAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCACTCAGGATGATGCCCTCCAGGTCCAACCATTTGGTGAGGAATT  900

seq1  TCGTAAATTCATTCTTTTTAATAGCTGAGTAGTACTCCATTGTGTAAATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTAAATTCATTCTTTTTAATAGCTGAGTAGTACTCCATTGTGTAAATG  950

seq1  TACCACATTTTTTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTT  1000
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TACCACATTTTTTGTATCCATTCCTCTG-TGAGGGGCATCTGGGTTCTTT  999

seq1  CCAGCTTCTGGCTATTATAATTAAGGCTGCTATGAACATAGTGGAGCATG  1050
      ||||||||| |||||||||||  | ||||||||||||| ||| |||||||
seq2  CCAGCTTCT-GCTATTATAAT--AAGCTGCTATGAACAAAGT-GAGCATG  1045

seq1  TTTCTTTCTTAATAGTTGGAACATCTTCTGGATATAAGC  1089
      |||||||| |||||||  ||||||||||| |||||||||
seq2  TTTCTTTC-TAATAGT--GAACATCTTCT-GATATAAGC  1080

seq1: chr7_61475146_61475559
seq2: B6Ng01-011B03.g_66_481 (reverse)

seq1  TGTTACT--CCTCTCTGTCTTCTTTTGGCTTTAATAATGCTTTAGTCTCA  48
      |||||||  || | | | ||||||| ||||||||||||||||||||||| 
seq2  TGTTACTCCCCCCCCAGACTTCTTTAGGCTTTAATAATGCTTTAGTCTCC  50

seq1  AACAAAACAAAACAAAACAAAACAACAACAAACAAAAAAACAAAAAAAAC  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACAAAACAAAACAAAACAACAACAAACAAAAAAACAAAAAAAAC  100

seq1  AAAAACCAAACAAACAAACAAACAAACAAACAAAAGAACCAACAATCTTG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCAAACAAACAAACAAACAAACAAACAAAAGAACCAACAATCTTG  150

seq1  TTTTTCTATGCTGTCTTTGCAGTTTTTACTTTTCTTTTCTTTTTTTTTTG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTATGCTGTCTTTGCAGTTTTTACTTTTCTTTTCTTTTTTTTTTG  200

seq1  TGTTATGTGTTATTCTTTACATTGAGACCACAGTGTTGCCTCCCTACAAC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATGTGTTATTCTTTACATTGAGACCACAGTGTTGCCTCCCTACAAC  250

seq1  AGTCCCATTCTTCCTTTGACTCCAAACTACCCTCTCCCCTGATTCATTTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCATTCTTCCTTTGACTCCAAACTACCCTCTCCCCTGATTCATTTT  300

seq1  TCTGTTTCTCTTCAAAAAAGAGCAGGCCTCCCAGGGATAGCAAACAAACA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTCTCTTCAAAAAAGAGCAGGCCTCCCAGGGATAGCAAACAAACA  350

seq1  ATATGCAATAAGATTAGACACCAACTCTTATATCAAGGCTGGATGAAGCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCAATAAGATTAGACACCAACTCTTATATCAAGGCTGGATGAAGCT  400

seq1  ACCAACTGAGGAATTC  414
      ||||||||||||||||
seq2  ACCAACTGAGGAATTC  416