BAC Information

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BAC

Clone NameB6Ng01-013M08
Chromosome7 (Build37)
Map Location 125,087,515 - 125,274,099
singlet/doubletdoublet
Overlap geneRps15a, Arl6ip1
Upstream geneXylt1, LOC669758
Downstream gene2610207I05Rik, LOC100043339, Syt17, LOC100042845, E030018N11Rik, Coq7, Tmc7, B230311B06Rik, Tmc5, Mir16, 6330503K22Rik, 9030624J02Rik, 2310008H09Rik, Iqck, Gprc5b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013M08.bB6Ng01-013M08.g
ACCDH848505DH848506
length1,108578
definitionDH848505|Mus musculus domesticus DNA, BAC clone: B6Ng01-013M08, 5' end.DH848506|Mus musculus domesticus DNA, BAC clone: B6Ng01-013M08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(125,087,515 - 125,088,615)(125,273,526 - 125,274,099)
sequence
gaattctactgtgcccaatttaacaccataaaatggtggggtttgctgtc
gaaaaaatatgccttgatgtttattttcaagcaggatgtccattcctcag
ctcataatgcagtatctggaaccatgcctgcccataatgatgctggatat
attcacatcgtgaagccagtcactgtggctggaaaggtagctatctttgt
cttctctgaaccttattccatacatttctaggagcgttccaccgcctagt
cacaatgttcagacccgtcatgagcacatcacacacgtcaggacatgtga
ggcctttgggatattttccaactgaagctggtgagaaaggtccctttctt
ttcctcttgggtcaggaaaggtggaccagactgatctgaagcaatgtccc
ttcttcagcagaaagttgtcctagtccctggaggtgacacgagagcactc
agggaagacagtgaggccaacaaggaatgacatggaggcatgagacctgg
tggccctgaggccagaagcctgcatgcatttgcttgcatgaatgtatgag
tcctctttttaaatggctaagaaggtaaaggtgcttgctaccaaccctgt
cttccaaagtttgagcctcaaactacgtattgtggtaggagaaaatcaac
tcccacaagttgtcctctgacaggcacaaataaataagtataataaaaaa
aatcaattaatctaaaacaattatctttgttttagattattgttctacat
ttagatagattgtatctaaataatctaaaaataatcatttaaagctatca
tctgccattagtgagttttgaaaactaaaaacaatagtagtaatagtgac
caattatttaagtgttcactctggggcctggcacactaatttcccttagt
aattcttaacaacaaccctgaggtcagtaattccctcatgcaaattgtgt
ggctaaaaggatgagatgttgagaggtcagggtaacttgttaagatcatc
aggttaaatattatctaccgggctgggaaagatggctccagcggttaaga
gccctggatttgctctcccagataccctggagtctcaagtcccgaaacct
aatggtgg
gaattccaggctttacaatttttgacatgatttctgtatcaaccgaagtc
ataatatcccccccccgccccgcccacacacaatgagcgtccttcctggt
caaaactgttgtctgtaccttctagtactttccacaagttctatgacaaa
ttgtatgcccctttgacagagccaccataggccaggaagggaccaggcat
atttaggagcactatgtgatctctcacatttctctttaacctccaaggcc
tttaaagaacctgggaattaaggaacgaagtgtttttaaaaataatttaa
aattagttgaaggtcgtatttagcctggcttccccatacatccattaatc
tatcagtctgaagccctccaacatccgaattgctcctctactcatccatc
cctccgaatgaagcgctcccctagctacctgaagtactcatagattatca
agtgaagcaccccgcaaatgattcccccaaaaactggcttgcaaatgaag
ccctttaagagtttgtgcatcttccattgtttctccataggccagagctg
gggagaaggcacagacagccgctcactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_125087515_125088615
seq2: B6Ng01-013M08.b_50_1157

seq1  GAATTCTACTGTGCCCAATTTAACACCATAAAATGGTGGGGTTTGCTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTGTGCCCAATTTAACACCATAAAATGGTGGGGTTTGCTGTC  50

seq1  GAAAAAATATGCCTTGATGTTTATTTTCAAGCAGGATGTCCATTCCTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAATATGCCTTGATGTTTATTTTCAAGCAGGATGTCCATTCCTCAG  100

seq1  CTCATAATGCAGTATCTGGAACCATGCCTGCCCATAATGATGCTGGATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAATGCAGTATCTGGAACCATGCCTGCCCATAATGATGCTGGATAT  150

seq1  ATTCACATCGTGAAGCCAGTCACTGTGGCTGGAAAGGTAGCTATCTTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACATCGTGAAGCCAGTCACTGTGGCTGGAAAGGTAGCTATCTTTGT  200

seq1  CTTCTCTGAACCTTATTCCATACATTTCTAGGAGCGTTCCACCGCCTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTGAACCTTATTCCATACATTTCTAGGAGCGTTCCACCGCCTAGT  250

seq1  CACAATGTTCAGACCCGTCATGAGCACATCACACACGTCAGGACATGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGTTCAGACCCGTCATGAGCACATCACACACGTCAGGACATGTGA  300

seq1  GGCCTTTGGGATATTTTCCAACTGAAGCTGGTGAGAAAGGTCCCTTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTTGGGATATTTTCCAACTGAAGCTGGTGAGAAAGGTCCCTTTCTT  350

seq1  TTCCTCTTGGGTCAGGAAAGGTGGACCAGACTGATCTGAAGCAATGTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTTGGGTCAGGAAAGGTGGACCAGACTGATCTGAAGCAATGTCCC  400

seq1  TTCTTCAGCAGAAAGTTGTCCTAGTCCCTGGAGGTGACACGAGAGCACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAGCAGAAAGTTGTCCTAGTCCCTGGAGGTGACACGAGAGCACTC  450

seq1  AGGGAAGACAGTGAGGCCAACAAGGAATGACATGGAGGCATGAGACCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGACAGTGAGGCCAACAAGGAATGACATGGAGGCATGAGACCTGG  500

seq1  TGGCCCTGAGGCCAGAAGCCTGCATGCATTTGCTTGCATGAATGTATGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCTGAGGCCAGAAGCCTGCATGCATTTGCTTGCATGAATGTATGAG  550

seq1  TCCTCTTTTTAAATGGCTAAGAAGGTAAAGGTGCTTGCTACCAACCCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTTTTAAATGGCTAAGAAGGTAAAGGTGCTTGCTACCAACCCTGT  600

seq1  CTTCCAAAGTTTGAGCCTCAAACTACGTATTGTGGTAGGAGAAAATCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAAAGTTTGAGCCTCAAACTACGTATTGTGGTAGGAGAAAATCAAC  650

seq1  TCCCACAAGTTGTCCTCTGACAGGCACAAATAAATAAGTATAATAAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACAAGTTGTCCTCTGACAGGCACAAATAAATAAGTATAATAAAAAA  700

seq1  AATCAATTAATCTAAAACAATTATC-TTGTTTTAGATTATTGTTCTACAT  749
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AATCAATTAATCTAAAACAATTATCTTTGTTTTAGATTATTGTTCTACAT  750

seq1  TTAGATAGATTGTATCTAAATAATCTAAAAATAATCATTTAAAGCTATCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATAGATTGTATCTAAATAATCTAAAAATAATCATTTAAAGCTATCA  800

seq1  TCTGCCATTAGTGAGTTTTGAAAACTAAAAACAATAGTAGTAATAGTGAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCATTAGTGAGTTTTGAAAACTAAAAACAATAGTAGTAATAGTGAC  850

seq1  CAATTA-TTAAGTGTTCACTCT-GGGCCTGGCACACTAATTTCCCTTAGT  897
      |||||| ||||||||||||||| |||||||||||||||||||||||||||
seq2  CAATTATTTAAGTGTTCACTCTGGGGCCTGGCACACTAATTTCCCTTAGT  900

seq1  AATTCTTAAC-ACAACCCTGAGGTCAGTAATCCCTTCATGCAAATTGTGT  946
      |||||||||| |||||||||||||||||||| || |||||||||||||||
seq2  AATTCTTAACAACAACCCTGAGGTCAGTAATTCCCTCATGCAAATTGTGT  950

seq1  GGCTAAAAAGTGATGAGATGTTGAGAGGTCA-GGTAACTTGTTTAAGATC  995
      ||||||||   |||||||||||||||||||| ||||||||| ||||||||
seq2  GGCTAAAA--GGATGAGATGTTGAGAGGTCAGGGTAACTTG-TTAAGATC  997

seq1  ATACAGTTAAAATATTATCTA-CAGGCT-GGAGAGATGGCT-CAGCGGTT  1042
      || ||| | |||||||||||| | |||| ||| |||||||| ||||||||
seq2  AT-CAGGTTAAATATTATCTACCGGGCTGGGAAAGATGGCTCCAGCGGTT  1046

seq1  AAGAGCACTG--ATTGCTCTTCCAGAAGACCT-GAGT-TCAAGTCCCAGA  1088
      |||||| |||   ||||||| |||||   ||| |||| ||||||||| ||
seq2  AAGAGCCCTGGATTTGCTCTCCCAGATACCCTGGAGTCTCAAGTCCC-GA  1095

seq1  AACTACATGGTGG  1101
      |||   |||||||
seq2  AACCTAATGGTGG  1108

seq1: chr7_125273526_125274099
seq2: B6Ng01-013M08.g_71_648 (reverse)

seq1  AAGTGAGC-GCTGTCTGTGCCTTCTCCCCAGCTCTGGCCTTTGGAGAA--  47
      |||||||| ||||||||||||||||||||||||||||||| |||||||  
seq2  AAGTGAGCGGCTGTCTGTGCCTTCTCCCCAGCTCTGGCCTATGGAGAAAC  50

seq1  CATGGAAGATGCACAAACTCTTAAAGGGCTTCATTTGC-AGCCAGTTTTT  96
       ||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AATGGAAGATGCACAAACTCTTAAAGGGCTTCATTTGCAAGCCAGTTTTT  100

seq1  GGGGGAATCATTTGCGGGGTGCTTCACTTGATAATCTATGAGTACTTCAG  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAATCATTTGCGGGGTGCTTCACTTGATAATCTATGAGTACTTCAG  150

seq1  GTAGCTAGGGGAGCGCTTCATTCGGAGGGATGGATGAGTAGAGGAGCAAT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTAGGGGAGCGCTTCATTCGGAGGGATGGATGAGTAGAGGAGCAAT  200

seq1  TCGGATGTTGGAGGGCTTCAGACTGATAGATTAATGGATGTATGGGGAAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGATGTTGGAGGGCTTCAGACTGATAGATTAATGGATGTATGGGGAAG  250

seq1  CCAGGCTAAATACGACCTTCAACTAATTTTAAATTATTTTTAAAAACACT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTAAATACGACCTTCAACTAATTTTAAATTATTTTTAAAAACACT  300

seq1  TCGTTCCTTAATTCCCAGGTTCTTTAAAGGCCTTGGAGGTTAAAGAGAAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTCCTTAATTCCCAGGTTCTTTAAAGGCCTTGGAGGTTAAAGAGAAA  350

seq1  TGTGAGAGATCACATAGTGCTCCTAAATATGCCTGGTCCCTTCCTGGCCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGAGATCACATAGTGCTCCTAAATATGCCTGGTCCCTTCCTGGCCT  400

seq1  ATGGTGGCTCTGTCAAAGGGGCATACAATTTGTCATAGAACTTGTGGAAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGGCTCTGTCAAAGGGGCATACAATTTGTCATAGAACTTGTGGAAA  450

seq1  GTACTAGAAGGTACAGACAACAGTTTTGACCAGGAAGGACGCTCATTGTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTAGAAGGTACAGACAACAGTTTTGACCAGGAAGGACGCTCATTGTG  500

seq1  TGTGGGCGGGGCGGGGGGGGGATATTATGACTTCGGTTGATACAGAAATC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGCGGGGCGGGGGGGGGATATTATGACTTCGGTTGATACAGAAATC  550

seq1  ATGTCAAAAATTGTAAAGCCTGGAATTC  574
      ||||||||||||||||||||||||||||
seq2  ATGTCAAAAATTGTAAAGCCTGGAATTC  578