BAC Information

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BAC

Clone NameB6Ng01-014A20
Chromosome7 (Build37)
Map Location 103,591,618 - 103,614,642
singlet/doubletdoublet
Overlap geneOdz4
Upstream geneLOC666823, Frda-ps, EG666836, LOC670727, LOC666858
Downstream geneNars2, Gab2, LOC100040457, Usp35, EG622320, Alg8, Ndufc2, Thrsp, Kctd14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014A20.bB6Ng01-014A20.g
ACCDH848706DH848707
length2861,081
definitionDH848706|Mus musculus domesticus DNA, BAC clone: B6Ng01-014A20, 5' end.DH848707|Mus musculus domesticus DNA, BAC clone: B6Ng01-014A20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,614,357 - 103,614,642)(103,591,618 - 103,592,710)
sequence
gaattccctttaagaattccctcacatattgggtaagtaatactcctgca
agaagcctcatgttagctagctgttggcaaaggtagtgatgagttggatg
tttaggatggaaattgtggaattttgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtatgcgcagtaaatgacaccctgtgacatgcagaatggaatggg
gatgtcatgaaaaaaaatggcagtcataaaagttggttgaatatacaaca
acaaaaaattgatttattttaagttcaacacataaa
gaattcaatcgccaaatcataaggcttgcttcttgttgctaattgcacct
tcaaccacatacttccctgcccaatttgaccaaagcaactgaagcaggat
ctaactacccatttccaaggctttagccctctggttgtattgccttgact
tacctactatgaaagaaatatgtttagctatctttctcctctcattgcct
ttctgaaagttcccctgatagaaaagaacaagtcaaccagaggctcagaa
tcctgttcctttggtactgtaactatagtggaaaatcagtgtgtgcagaa
aacactccaggggtgagaagaaacatttgttgagggcctataagatgtca
tccagtgagctgagcatttcacagtccatttcaccctcacaactactggg
agaggtaagcattgttatttctgattcacagatggagcatggagccttag
agagggtcaatggcttaaagtcacatagctgggacatgggggaaactaga
attggctcaaggtcatccaccacaaagccccacctcttcccgatgtgtgg
gggaaagcaaccaggacaactagaactagaactaccatttgtggggtgcc
cactctatgcctgacttgcgtgaacccatttaaccccgataaagagccca
tgatattaaacactcatcacccatttgtcatatgagaaaaccagggccaa
gagaagtgctttcagaatggataattttctgagagtggctgtttagagga
taagccccagcaatctgtcactgtttgctgctctgtcataaggggctctt
agccaaatcagcaaataagcaaaggcattgcctataggacatacttagta
atcttggtggttggtaattaatttcgtagttttctttgccctggagtgat
attctgggttgctacttgtagcccaattctagccaggggagtgcccttca
ctgtgcgagaacactatagtcagaggatcccagagtgtgagcatcgagca
tagtggagccatgagcatgtgcaagagagaagactttcagatgaccgatg
gagcagtctgactgtcaactctggactctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_103614357_103614642
seq2: B6Ng01-014A20.b_28_313 (reverse)

seq1  TTTATGTGTTGAACTGAAAATAAATCAATTTTTTGTTGTTGTATATTCAA  50
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTATGTGTTGAACTTAAAATAAATCAATTTTTTGTTGTTGTATATTCAA  50

seq1  CCAACTTTTATGACTGCCATTTTTTTTCATGACATCCCCATTCCATTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCAACTTTTATGACTGCCATTTTTTTTCATGACATCCCCATTCCATTCTG  100

seq1  CATGTCACAGGGTGTCATTTACTGTGCATACACACACACACACACACACA  150
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CATGTCACAGGGTGTCATTTACTGCGCATACACACACACACACACACACA  150

seq1  CACACACACACAAAATTCCACAATTTCCATCCTAAACATCCAACTCATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACAAAATTCCACAATTTCCATCCTAAACATCCAACTCATCA  200

seq1  CTACCTTTGCCAACAGCTAGCTAACATGAGGCTTCTTGCAGGAGTATTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTTTGCCAACAGCTAGCTAACATGAGGCTTCTTGCAGGAGTATTAC  250

seq1  TTACCCAATATGTGAGGGAATTCTTAAAGGGAATTC  286
      ||||||||||||||||||||||||||||||||||||
seq2  TTACCCAATATGTGAGGGAATTCTTAAAGGGAATTC  286

seq1: chr7_103591618_103592710
seq2: B6Ng01-014A20.g_64_1144

seq1  GAATTCAATCGCCAAATCATAAGGCTTGCTTCTTGTTGCTAATTGCACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCGCCAAATCATAAGGCTTGCTTCTTGTTGCTAATTGCACCT  50

seq1  TCAACCACATACTTCCCTGCCCAATTTGACCAAAGCAACTGAAGCAGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCACATACTTCCCTGCCCAATTTGACCAAAGCAACTGAAGCAGGAT  100

seq1  CTAACTACCCATTTCCAAGGCTTTAGCCCTCTGGTTGTATTGCCTTGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTACCCATTTCCAAGGCTTTAGCCCTCTGGTTGTATTGCCTTGACT  150

seq1  TACCTACTATGAAAGAAATATGTTTAGCTATCTTTCTCCTCTCATTGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTACTATGAAAGAAATATGTTTAGCTATCTTTCTCCTCTCATTGCCT  200

seq1  TTCTGAAAGTTCCCCTGATAGAAAAGAACAAGTCAACCAGAGGCTCAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAAGTTCCCCTGATAGAAAAGAACAAGTCAACCAGAGGCTCAGAA  250

seq1  TCCTGTTCCTTTGGTACTGTAACTATAGTGGAAAATCAGTGTGTGCAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTTCCTTTGGTACTGTAACTATAGTGGAAAATCAGTGTGTGCAGAA  300

seq1  AACACTCCAGGGGTGAGAAGAAACATTTGTTGAGGGCCTATAAGATGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTCCAGGGGTGAGAAGAAACATTTGTTGAGGGCCTATAAGATGTCA  350

seq1  TCCAGTGAGCTGAGCATTTCACAGTCCATTTCACCCTCACAACTACTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGAGCTGAGCATTTCACAGTCCATTTCACCCTCACAACTACTGGG  400

seq1  AGAGGTAAGCATTGTTATTTCTGATTCACAGATGGAGCATGGAGCCTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTAAGCATTGTTATTTCTGATTCACAGATGGAGCATGGAGCCTTAG  450

seq1  AGAGGGTCAATGGCTTAAAGTCACATAGCTGGGACATGGGGGAAACTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGTCAATGGCTTAAAGTCACATAGCTGGGACATGGGGGAAACTAGA  500

seq1  ATTGGCTCAAGGTCATCCACCACAAAGCCCCACCTCTTCCCGATGTGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCTCAAGGTCATCCACCACAAAGCCCCACCTCTTCCCGATGTGTGG  550

seq1  GGGAAAGCAACCAGGACAACTAGAACTAGAACTACCATTTGTGGGGTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGCAACCAGGACAACTAGAACTAGAACTACCATTTGTGGGGTGCC  600

seq1  CACTCTATGCCTGACTTGCGTGAACCCATTTAACCCCGATAAAGAGCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTATGCCTGACTTGCGTGAACCCATTTAACCCCGATAAAGAGCCCA  650

seq1  TGATATTAAACACTCATCACCCATTTGTCATATGAGAAAACCAGGGCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTAAACACTCATCACCCATTTGTCATATGAGAAAACCAGGGCCAA  700

seq1  GAGAAGTGCTTTCAGAATGGATAATTTTCTGAGAGTGGCTGTTTAGAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTGCTTTCAGAATGGATAATTTTCTGAGAGTGGCTGTTTAGAGGA  750

seq1  TAAGCCCCAGCAATCTGTCACTGTTTGCTGCTCTGTCATAAGGGGCTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCCCAGCAATCTGTCACTGTTTGCTGCTCTGTCATAAGGGGCTCTT  800

seq1  AGCCAAATCAGCAAATAAGCAAAGGCATTGCCTATAGGACATACTTAGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAATCAGCAAATAAGCAAAGGCATTGCCTATAGGACATACTTAGTA  850

seq1  ATCTTGGTGGTTGGTAATTAATTTCGTAGTTTTCTTTGCCCTGGAGTGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATCTTGGTGGTTGGTAATTAATTTCGTAGTTTTCTTTGCCCTGGAGTGA-  899

seq1  TATTCT-GGTTGCTACTTGTAGCCC-ATTCTAGCCAGTGAGTTGCCCTCC  948
      |||||| |||||||||||||||||| ||||||||||| |   |||||| |
seq2  TATTCTGGGTTGCTACTTGTAGCCCAATTCTAGCCAGGGGAGTGCCCTTC  949

seq1  ACTGTGCGAGACACCTAATAGGTCAGAGGATCCCAGAGTGTTGAGCATCG  998
      ||||||||||| ||   ||| ||||||||||||||||||| |||||||||
seq2  ACTGTGCGAGA-ACACTATA-GTCAGAGGATCCCAGAGTG-TGAGCATCG  996

seq1  AGCATAGTTGGAAGCCATGAGCCATGTGGCAGAGAGAGAAGACTTTCAGA  1048
      ||||||||  | ||||||||| ||||| ||| ||||||||||||||||||
seq2  AGCATAGT--GGAGCCATGAG-CATGT-GCA-AGAGAGAAGACTTTCAGA  1041

seq1  TGACCCCGATGGAGGCCAGTCTGGACTGTCAACTCTGGACTCTGC  1093
      |||  |||||||||  |||||| ||||||||||||||||||||||
seq2  TGA--CCGATGGAG--CAGTCT-GACTGTCAACTCTGGACTCTGC  1081