BAC Information

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BAC

Clone NameB6Ng01-015I23
Chromosome7 (Build37)
Map Location 117,113,087 - 117,307,431
singlet/doubletdoublet
Overlap geneTmem41b, Ipo7, AA474408, Zfp143, Wee1
Upstream geneTub, Ric3, Lmo1, Stk33, EG668320, 1700095J03Rik, Trim66, Rpl27a, St5, LOC100042582, D930014E17Rik, BC051019, Ascl3, Tmem9b, 4930431P19Rik, Nrip3, Scube2, Phxr5, Rab6ip1
Downstream geneSwap70, EG668368, Sbf2, LOC668246, Adm, B430319F04Rik, Ampd3, Rnf141, Xlkd1, Mrvi1, Ctr9, Eif4g2, LOC100043221, LOC100042658
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015I23.bB6Ng01-015I23.g
ACCDH849780DH849781
length1,029414
definitionDH849780|Mus musculus domesticus DNA, BAC clone: B6Ng01-015I23, 5' end.DH849781|Mus musculus domesticus DNA, BAC clone: B6Ng01-015I23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,306,404 - 117,307,431)(117,113,087 - 117,113,506)
sequence
gaattctccagctttaaataacaaaatattacaagggaattcaaaaccat
gaacactaaacagagttttaaaaagtaataataatagcctgagaaaaact
gtctccaacaaaattcaagctgagagtatctcaaatgaataaaactttat
acagaaaaacaaaccagaactgggtggtagtagcacgtgcccttacagtc
agcacttgggagtcagtcacctttctgagttcgaggccaccctgttctac
agagtaagttccaggacagccaggactacacagagaaaccctgtgtaaaa
caaaacaaacaaacaaaaaaaaactcacaaccaaacaaccccccccccgc
cagcctcctacataaaacagatatattggtgatagcctgtaatctagcac
ctcaaaatcagagaatgtgagtttgaggctagcctgaactgcacaacaag
actctgtctcaaaagaaaacaaacaacaaacaaaaacaaaaaagaaaaaa
aaaaacgctaacaaatctaataagatgggtgggtagcaccgcccatctga
gaggtagggcaggtaattaggagttcaaaactgccactttttctcccctc
ctgtatttttatttatgtgtatatgtgtacaccatgtgcatgcagtgccc
accaaaggcaggagagggcgttagagtcctctgagaccagagttacagat
ggttgtgcgttaccaagtgagccctgggaattgaacctgggtcataaggg
aaaactgagccgccagtgctcttagcaactgaatcagctctctagcccta
acgatatgataattttaaaaacagacttttgagctatataggccagaata
ggcactggattccctggaactggagttgcaaacagttgttaactgagttg
ttctttaactactaagctttatttgaaaagtggcagcaggaagatcaggg
gtttaagatcagcacagctacactaccagtggtgtttcctcagtcagcca
tcctagctaccaggaaatgccttggggga
caggatctgtgtggtttgggggaattcagaaatccatgcccagaacagga
tgagcatctatgtcaacttgtccaccaggagtaactgaaaaatctcacaa
ggaatgcctgtcagtctattaaggtctgggacacagcccattggcagagt
gtagatcaggctgagctcaaatttactatgtactgagggtgactttcatc
ctctgaattattctgcctccacctagtaaatggtaggattacaacaagca
ggaccagttttcacaagtgaggaattaaatgcatggctgtgtgcatgcca
aggaaagcactctatcaactgagccacaatctaacacctcatttactgtg
gagctttagttcttggctttttgggttttttttttttttttttttttttt
ggtttgtttttggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_117306404_117307431
seq2: B6Ng01-015I23.b_45_1073 (reverse)

seq1  TCCCCCCAGGCAATTTCCTGTGTAGCTAGGGATGGCTGACT--GGGAACA  48
      |||||| |||| |||||||| ||||||| ||||||||||||  || ||||
seq2  TCCCCCAAGGC-ATTTCCTG-GTAGCTA-GGATGGCTGACTGAGGAAACA  47

seq1  -CACT-GTAGTTGTAGCTGTGCCTGATCTTAAACCCCTGATCTTCCTGCT  96
       |||| |||| |||||||||| ||||||||||||||||||||||||||||
seq2  CCACTGGTAG-TGTAGCTGTG-CTGATCTTAAACCCCTGATCTTCCTGCT  95

seq1  GCCACTTTTC-AATTAAGCTAAGTAGTT-AAGAAC-ACTCAGTTAACAAC  143
      |||||||||| ||| ||||| ||||||| |||||| ||||||||||||||
seq2  GCCACTTTTCAAATAAAGCTTAGTAGTTAAAGAACAACTCAGTTAACAAC  145

seq1  TGTTTGCAACTCCAGTTCCAGGGAATCCAGTGCCCTATTCTGGCCTATAT  193
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGTTTGCAACTCCAGTTCCAGGGAATCCAGTG-CCTATTCTGGCCTATAT  194

seq1  AGCTCAAGAGTCTGTTTTTAAAATTATCATATCGTTAGGGGCTAGAGAGC  243
      ||||||| ||||||||||||||||||||||||||||| ||||||||||||
seq2  AGCTCAAAAGTCTGTTTTTAAAATTATCATATCGTTA-GGGCTAGAGAGC  243

seq1  TGATTCAGTTGCTAAGAGCACTGGCGGCTCAGTTTTCCC-TATGACCCAG  292
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGATTCAGTTGCTAAGAGCACTGGCGGCTCAGTTTTCCCTTATGACCCAG  293

seq1  GTTCAATTCCCAGGGCTCACTTGGTAACGCACAACCATCTGTAACTCTGG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAATTCCCAGGGCTCACTTGGTAACGCACAACCATCTGTAACTCTGG  343

seq1  TCTCAGAGGACTCTAACGCCCTCTCCTGCCTTTGGTGGGCACTGCATGCA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGAGGACTCTAACGCCCTCTCCTGCCTTTGGTGGGCACTGCATGCA  393

seq1  CATGGTGTACACATATACACATAAATAAAAATACAGGAGGGGAGAAAAAG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTGTACACATATACACATAAATAAAAATACAGGAGGGGAGAAAAAG  443

seq1  TGGCAGTTTTGAACTCCTAATTACCTGCCCTACCTCTCAGATGGGCGGTG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGTTTTGAACTCCTAATTACCTGCCCTACCTCTCAGATGGGCGGTG  493

seq1  CTACCCACCCATCTTATTAGATTTGTTAGCGTTTTTTTTTTTCTTTTTTG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCACCCATCTTATTAGATTTGTTAGCGTTTTTTTTTTTCTTTTTTG  543

seq1  TTTTTGTTTGTTGTTTGTTTTCTTTTGAGACAGAGTCTTGTTGTGCAGTT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTGTTGTTTGTTTTCTTTTGAGACAGAGTCTTGTTGTGCAGTT  593

seq1  CAGGCTAGCCTCAAACTCACATTCTCTGATTTTGAGGTGCTAGATTACAG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTAGCCTCAAACTCACATTCTCTGATTTTGAGGTGCTAGATTACAG  643

seq1  GCTATCACCAATATATCTGTTTTATGTAGGAGGCTGGCGGGGGGGGGGTT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCACCAATATATCTGTTTTATGTAGGAGGCTGGCGGGGGGGGGGTT  693

seq1  GTTTGGTTGTGAGTTTTTTTTTGTTTGTTTGTTTTGTTTTACACAGGGTT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTTGTGAGTTTTTTTTTGTTTGTTTGTTTTGTTTTACACAGGGTT  743

seq1  TCTCTGTGTAGTCCTGGCTGTCCTGGAACTTACTCTGTAGAACAGGGTGG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGTAGTCCTGGCTGTCCTGGAACTTACTCTGTAGAACAGGGTGG  793

seq1  CCTCGAACTCAGAAAGGTGACTGACTCCCAAGTGCTGACTGTAAGGGCAC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGAACTCAGAAAGGTGACTGACTCCCAAGTGCTGACTGTAAGGGCAC  843

seq1  GTGCTACTACCACCCAGTTCTGGTTTGTTTTTCTGTATAAAGTTTTATTC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTACTACCACCCAGTTCTGGTTTGTTTTTCTGTATAAAGTTTTATTC  893

seq1  ATTTGAGATACTCTCAGCTTGAATTTTGTTGGAGACAGTTTTTCTCAGGC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGATACTCTCAGCTTGAATTTTGTTGGAGACAGTTTTTCTCAGGC  943

seq1  TATTATTATTACTTTTTAAAACTCTGTTTAGTGTTCATGGTTTTGAATTC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTATTACTTTTTAAAACTCTGTTTAGTGTTCATGGTTTTGAATTC  993

seq1  CCTTGTAATATTTTGTTATTTAAAGCTGGAGAATTC  1028
      ||||||||||||||||||||||||||||||||||||
seq2  CCTTGTAATATTTTGTTATTTAAAGCTGGAGAATTC  1029

seq1: chr7_117113087_117113506
seq2: B6Ng01-015I23.g_66_485

seq1  GAATTCCAGGATCTGTGTGGTTTGGGGGAATTCAGAAATCCATGCCCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGATCTGTGTGGTTTGGGGGAATTCAGAAATCCATGCCCAGA  50

seq1  ACAGGATGAGCATCTATGTCAACTTGTCCACCAGGAGTAACTGAAAAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGATGAGCATCTATGTCAACTTGTCCACCAGGAGTAACTGAAAAATC  100

seq1  TCACAAGGAATGCCTGTCAGTCTATTAAGGTCTGGGACACAGCCCATTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGGAATGCCTGTCAGTCTATTAAGGTCTGGGACACAGCCCATTGG  150

seq1  CAGAGTGTAGATCAGGCTGAGCTCAAATTTACTATGTACTGAGGGTGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGTAGATCAGGCTGAGCTCAAATTTACTATGTACTGAGGGTGACT  200

seq1  TTCATCCTCTGAATTATTCTGCCTCCACCTAGTAAATGGTAGGATTACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCCTCTGAATTATTCTGCCTCCACCTAGTAAATGGTAGGATTACAA  250

seq1  CAAGCAGGACCAGTTTTCACAAGTGAGGAATTAAATGCATGGCTGTGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAGGACCAGTTTTCACAAGTGAGGAATTAAATGCATGGCTGTGTGC  300

seq1  ATGCCAAGGAAAGCACTCTATCAACTGAGCCACAATCTAACACCTCATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAAGGAAAGCACTCTATCAACTGAGCCACAATCTAACACCTCATTT  350

seq1  ACTGTGGAGCTTTAGTTCTTGGCTTTTTGGGTTTTTTTTTTTTTTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGAGCTTTAGTTCTTGGCTTTTTGGGTTTTTTTTTTTTTTTTTTT  400

seq1  TTTTTTGGTTTGTTTTTGGT  420
      ||||||||||||||||||||
seq2  TTTTTTGGTTTGTTTTTGGT  420