BAC Information

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BAC

Clone NameB6Ng01-015J09
Chromosome7 (Build37)
Map Location 124,810,707 - 124,916,060
singlet/doubletdoublet
Overlap geneXylt1
Upstream geneLOC546993, LOC100043330
Downstream geneLOC669758, Rps15a, Arl6ip1, 2610207I05Rik, LOC100043339, Syt17, LOC100042845, E030018N11Rik, Coq7, Tmc7, B230311B06Rik, Tmc5, Mir16, 6330503K22Rik, 9030624J02Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015J09.bB6Ng01-015J09.g
ACCDH849800DH849801
length958893
definitionDH849800|Mus musculus domesticus DNA, BAC clone: B6Ng01-015J09, 5' end.DH849801|Mus musculus domesticus DNA, BAC clone: B6Ng01-015J09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(124,915,103 - 124,916,060)(124,810,707 - 124,811,604)
sequence
gaattcatgtcccttgtgcctgtgtggcatttgctaattctccaaccctg
gcctaagagtataaatcacactctgctatgtgtgccattggggttcattc
agtggctgtgcactgtttcttggtggtaaaggttatacacattttgaagt
caccatttccatgcccaccaatgtagttgtgtccccaggacctgtaaacc
agcccagttttcagtgacacaggagagaagaataggcttggttctgaggc
catggcaattttcttactgaaagcagagtgatttgggtggaaaagaaaaa
aacttaacccccacgcctgttgtcttcttgtcttcaaagggcttcaacag
agcatgcaggaagtacaaggcccccttttcaaacactgacctgctttcaa
attagttccccagaagtttgaacaaggaatcaatgggaaaagaaaatgat
tccggagcgcggctgaaaggctagcgattctccagtgttttattgtcttg
aagagtggctacgcttggctggagtcagcagctgtctgcagtcaggacct
caagtgcaggaagtgagcacttctgtcttgctggggcttgttttattcca
tcactcatactgttgccaaggtcacagtcaccatttggagaatgatgagg
tggtacagtgctaaaggctcccctgtacataagtaaccaccaaggaaatt
gtttccactgttcagatttaaccagctttgcagataaacccaggcccctg
tgcatttatgagaggtactttaaggccacacaattcaattccaagtctct
gttgtatattaattacctagcaagtctgtgggtcctgtgatggccttgat
acacagcaatggctcacttcccagtgcacatagaagccatactgccattt
aaatgtatatttaaattgcactaatttgcttgtgatggagggttggatgc
atgctgta
gaattcagtgagctgatgcccagtgtgcaccgcggctctggttcacagta
agtagatgcctggttggcgactcttctaaacacatcggtgttccctttgg
ctttcagaggaggctttgaagctgcacaatgggccacctcgcagtgccta
catggagcagagtttccagagcctgaacccagtcctcagcctgcacatca
atcctgcccaagtcgaacaggcccggaagaatgcagccttcaccgggaca
gcgctagaagcctggctggactcgctggtgggtgggacttggactgccat
ggacatctgcaccacaggccccaccgcctgcccagtcatgcagacctgca
gccaaacagcctggagttccttcagccctgatcccaagtcagagctgggt
gcagtcaaacctgacggacggctcaggtagcactggccacaggggaccga
tgcagcctcaaccctggcccctgatcttatatgagggagggggaattcct
tttgtataaggacctcggccgactgtaggacagtggagagagagggtttg
gaggccagagagaagtcagcctgtatttgtgaagctggtctctgggctag
gtgacccagtcccggagctacagtggtctccctctaccagttgtcgctca
gtcctgcaggctcctgtttctccccctccgatggcctgcacccctacaag
tgagttttaaacttttattttgagcggcagaactttgttgactcggcacg
gtcggggtggaagtgcaagaccagatgagtccaggctgctctggttgaag
ctgaggttgtgtgaggtccttccaaaactcagccctccgggtagtccttt
gcctagggcttttctaaggacctcttctgacccaagggctctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_124915103_124916060
seq2: B6Ng01-015J09.b_46_1003 (reverse)

seq1  TACAGCATGCATCCAGCCCTCCATCACAAGCAAATAAGTGCAATTTAAAT  50
      ||||||||||||||| ||||||||||||||||||| ||||||||||||||
seq2  TACAGCATGCATCCAACCCTCCATCACAAGCAAATTAGTGCAATTTAAAT  50

seq1  AATACATTTAAATGGCAGTATTGGCTTCTATGTGCACTGGGAAGTGAGCC  100
       ||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  -ATACATTTAAATGGCAGTA-TGGCTTCTATGTGCACTGGGAAGTGAGCC  98

seq1  ATTGCTGTGTATCAAGGCCATCACAGGAACCACAGACCTGCTAGGTAATT  150
      |||||||||||||||||||||||||||| |||||||| ||||||||||||
seq2  ATTGCTGTGTATCAAGGCCATCACAGGACCCACAGACTTGCTAGGTAATT  148

seq1  AATATACAACAGAGACTTGGAATTGAATTGTGTGGCCTTAAAGTACCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACAACAGAGACTTGGAATTGAATTGTGTGGCCTTAAAGTACCTCT  198

seq1  CAT-AATGCACAGGGGCCTGGGTTTATCTGCAAAGCTGGTTAAATCTGAA  249
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATGCACAGGGGCCTGGGTTTATCTGCAAAGCTGGTTAAATCTGAA  248

seq1  CAGTGGAAACAA-TTCCTTGGTGGTTACTTATGTACAGGGGAGCCTTTAG  298
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAACAATTTCCTTGGTGGTTACTTATGTACAGGGGAGCCTTTAG  298

seq1  CACTGTACCACCTCATCATTCTCCAAATGGTGACTGTGACCTTGGCAACA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTACCACCTCATCATTCTCCAAATGGTGACTGTGACCTTGGCAACA  348

seq1  GTATGAGTGATGGAATAAAACAAGCCCCAGCAAGACAGAAGTGCTCACTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAGTGATGGAATAAAACAAGCCCCAGCAAGACAGAAGTGCTCACTT  398

seq1  CCTGCACTTGAGGTCCTGACTGCAGACAGCTGCTGACTCCAGCCAAGCGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCACTTGAGGTCCTGACTGCAGACAGCTGCTGACTCCAGCCAAGCGT  448

seq1  AGCCACTCTTCAAGACAATAAAACACTGGAGAATCGCTAGCCTTTCAGCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACTCTTCAAGACAATAAAACACTGGAGAATCGCTAGCCTTTCAGCC  498

seq1  GCGCTCCGGAATCATTTTCTTTTCCCATTGATTCCTTGTTCAAACTTCTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTCCGGAATCATTTTCTTTTCCCATTGATTCCTTGTTCAAACTTCTG  548

seq1  GGGAACTAATTTGAAAGCAGGTCAGTGTTTGAAAAGGGGGCCTTGTACTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACTAATTTGAAAGCAGGTCAGTGTTTGAAAAGGGGGCCTTGTACTT  598

seq1  CCTGCATGCTCTGTTGAAGCCCTTTGAAGACAAGAAGACAACAGGCGTGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCATGCTCTGTTGAAGCCCTTTGAAGACAAGAAGACAACAGGCGTGG  648

seq1  GGGTTAAGTTTTTTTCTTTTCCACCCAAATCACTCTGCTTTCAGTAAGAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAAGTTTTTTTCTTTTCCACCCAAATCACTCTGCTTTCAGTAAGAA  698

seq1  AATTGCCATGGCCTCAGAACCAAGCCTATTCTTCTCTCCTGTGTCACTGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCCATGGCCTCAGAACCAAGCCTATTCTTCTCTCCTGTGTCACTGA  748

seq1  AAACTGGGCTGGTTTACAGGTCCTGGGGACACAACTACATTGGTGGGCAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGGCTGGTTTACAGGTCCTGGGGACACAACTACATTGGTGGGCAT  798

seq1  GGAAATGGTGACTTCAAAATGTGTATAACCTTTACCACCAAGAAACAGTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGGTGACTTCAAAATGTGTATAACCTTTACCACCAAGAAACAGTG  848

seq1  CACAGCCACTGAATGAACCCCAATGGCACACATAGCAGAGTGTGATTTAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCACTGAATGAACCCCAATGGCACACATAGCAGAGTGTGATTTAT  898

seq1  ACTCTTAGGCCAGGGTTGGAGAATTAGCAAATGCCACACAGGCACAAGGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTAGGCCAGGGTTGGAGAATTAGCAAATGCCACACAGGCACAAGGG  948

seq1  ACATGAATTC  958
      ||||||||||
seq2  ACATGAATTC  958

seq1: chr7_124810707_124811604
seq2: B6Ng01-015J09.g_68_960

seq1  GAATTCAGTGAGCTGATGCCCAGTGTGCACCGCGGCTCTGGTTCACAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGAGCTGATGCCCAGTGTGCACCGCGGCTCTGGTTCACAGTA  50

seq1  AGTAGATGCCTGGTTGGCGACTCTTCTAAACACATCGGTGTTCCCTTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGATGCCTGGTTGGCGACTCTTCTAAACACATCGGTGTTCCCTTTGG  100

seq1  CTTTCAGAGGAGGCTTTGAAGCTGCACAATGGGCCACCTCGCAGTGCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGAGGAGGCTTTGAAGCTGCACAATGGGCCACCTCGCAGTGCCTA  150

seq1  CATGGAGCAGAGTTTCCAGAGCCTGAACCCAGTCCTCAGCCTGCACATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGCAGAGTTTCCAGAGCCTGAACCCAGTCCTCAGCCTGCACATCA  200

seq1  ATCCTGCCCAAGTCGAACAGGCCCGGAAGAATGCAGCCTTCACCGGGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGCCCAAGTCGAACAGGCCCGGAAGAATGCAGCCTTCACCGGGACA  250

seq1  GCGCTAGAAGCCTGGCTGGACTCGCTGGTGGGTGGGACTTGGACTGCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTAGAAGCCTGGCTGGACTCGCTGGTGGGTGGGACTTGGACTGCCAT  300

seq1  GGACATCTGCACCACAGGCCCCACCGCCTGCCCAGTCATGCAGACCTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATCTGCACCACAGGCCCCACCGCCTGCCCAGTCATGCAGACCTGCA  350

seq1  GCCAAACAGCCTGGAGTTCCTTCAGCCCTGATCCCAAGTCAGAGCTGGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAACAGCCTGGAGTTCCTTCAGCCCTGATCCCAAGTCAGAGCTGGGT  400

seq1  GCAGTCAAACCTGACGGACGGCTCAGGTAGCACTGGCCACAGGGGACCGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCAAACCTGACGGACGGCTCAGGTAGCACTGGCCACAGGGGACCGA  450

seq1  TGCAGCCTCAACCCTGGCCCCTGATCTTATATGAGGGAGGGGGAATTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCCTCAACCCTGGCCCCTGATCTTATATGAGGGAGGGGGAATTCCT  500

seq1  TTTGTATAAGGACCTCGGCCGACTGTAGGACAGTGGAGAGAGAGGGTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATAAGGACCTCGGCCGACTGTAGGACAGTGGAGAGAGAGGGTTTG  550

seq1  GAGGCCAGAGAGAAGTCAGCCTGTATTTGTGAAGCTGGTCTCTGGGCTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCAGAGAGAAGTCAGCCTGTATTTGTGAAGCTGGTCTCTGGGCTAG  600

seq1  GTGACCCAGTCCCGGAGCTACAGTGGTCTCCCTCTACCAGTTGTCGCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCCAGTCCCGGAGCTACAGTGGTCTCCCTCTACCAGTTGTCGCTCA  650

seq1  GTCCTGCAGGCTCCTG-TTCTCCCCCTCCGATGGCCTGCACCCCTACAAG  699
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTCCTGCAGGCTCCTGTTTCTCCCCCTCCGATGGCCTGCACCCCTACAAG  700

seq1  TGAGTTTTAAACTTTTATTTTGAGCGGCAGAACTTTGTTGACTCGGCACG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTTAAACTTTTATTTTGAGCGGCAGAACTTTGTTGACTCGGCACG  750

seq1  GTCGGGGTGGAAGTGCAAGACCAAGATGAAGTCCAGGCTGCTCTGGTTGA  799
      |||||||||||||||||||||| ||||| |||||||||||||||||||||
seq2  GTCGGGGTGGAAGTGCAAGACC-AGATG-AGTCCAGGCTGCTCTGGTTGA  798

seq1  AGCTGAGGTTGTGTGAGGTTCCTTCTCAAAACTCAGCCCTCCAGGTAGTC  849
      |||||||||||||||||| |||||| |||||||||||||||| |||||||
seq2  AGCTGAGGTTGTGTGAGG-TCCTTC-CAAAACTCAGCCCTCCGGGTAGTC  846

seq1  CTTTGCCAAGGGCATCTCTAAGGTACCTCTTCTGAACCCAAGGGCTCTG  898
      ||||||| ||||| | ||||||| |||||||||| ||||||||||||||
seq2  CTTTGCCTAGGGCTTTTCTAAGG-ACCTCTTCTG-ACCCAAGGGCTCTG  893