BAC Information

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BAC

Clone NameB6Ng01-016G09
Chromosome7 (Build37)
Map Location 111,024,976 - 111,165,338
singlet/doubletdoublet
Overlap geneOlfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639
Upstream geneOlfr568, Olfr569, Olfr570, Olfr571, Olfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582, Olfr583, Olfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1, Olfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y
Downstream geneOlfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016G09.bB6Ng01-016G09.g
ACCDH850370DH850371
length1,075934
definitionDH850370|Mus musculus domesticus DNA, BAC clone: B6Ng01-016G09, 5' end.DH850371|Mus musculus domesticus DNA, BAC clone: B6Ng01-016G09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,164,270 - 111,165,338)(111,024,976 - 111,025,916)
sequence
gaattcttttgcctgcccctaagacctggggtctggcagtgagctgagag
aaactttaatcccaggtcagcaggtgctgccagcactactgctcactccc
acgtttgcttagtctgcctttcaatacttccattgctcataagcagtgta
gctttagctctgggaaaaacattccttgcatgagctttaagttaccttcc
tgttacctttcattcctttcatccttggctctactcatcctcactgaggt
cccctctgttctccaaagctccccttagggcagctgttggtttgataact
gtttagaatgtgaaacccaggacttccagttttgactgagcatcacgtca
gagcttctgtctatctagttatgcttttagtttttcaaaagcataccttg
gaatcacagtcacaggaagtgcagtggtggtacttggtcagacagaaaca
tgacctccaaaaagctcagagtccaacaggaaggacagcatgtatcaatc
atttagtaggggggagttacagaatctatctatttgtttgttttgagttg
tttgagacagggtgtctctatttagaacttgctatgtagaccaggctagc
cctgaactcatatatctgcttgcctttgcctcccaggtgctgagattaaa
ggcatgctccacaatgactggctatgaagtcattttttttcattgaatgt
tactagtttttccaaacatcttattgaaacacatattcacaggttttaac
ctttagtcagataccatagcactatataatatacttgataaaaaagtaaa
atcaaaggagaccagtttttgggaattactcacctctagagtataaactc
tgtagccagcacagagttgcctctaagtgatcagctctaagtgattgtca
ttgataagttttcctaacgaaaactgggtgccgatatcagggaaagaata
agattcctcagaacaaggaaaccgaaatgatttgggaacattcccctttg
tggggaattcaacagtattaaatatttataggagtgaataaagaatcata
tgtagaatgccacagttctaaactg
gaattcctgcacctaagacactgtggaacagcaggtggaaagagtggaag
agactaacgattatggactttgctttgagactctctctcctagtgatgtc
agaagtgtcatccataaagtgtcgccagcacaacttcctaaacagtatct
gaacaaggaacaaaagctaatatggactccaaagtggactggagtaaact
tataaagcctctgctctacccaaagaaataagcaggcaacaaagaagcac
tatgaggcctcctacctctccctatagagtttctctaaccccttcaactg
tcatccattttattgtggaggttagcagaaatgtagagctccatttgagg
tgtaatgaatgactgaatatgttactgtttctcttgaccaacacaagaaa
gtagattggtccatacactatttctatagataaatccaccttgtcctttt
tttttttttttttttttggataaaatacttaccctttgtaactcccctaa
atagggaccaaactcggcgaatgaatgaaaagaaacttgaatgttctcct
gagaatcaaaactgaagttcttccaataaatattggcaatcaccatcatt
ctattatatcctaaattcacatgacgctgaaaactctgtttgctttacta
tactttgctgttacggtggaggtgaaaggccaatgcctcatgataatgcc
caaagtttagccctctattaatttttccccttttatttcttgctcctcat
ctttcacaatggtctgaattccctagatagagaaatacatttgatgctca
aacaaaaggctttggatatactacagaaaagtcaggcccgtgaaatccgt
aggagaatctgctgaaccagtaaactggaatactttgaaatggtgccttc
aaaataaaaaactcgagaaaagggagaatgaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_111164270_111165338
seq2: B6Ng01-016G09.b_34_1108 (reverse)

seq1  CAGTTTAGAACTGTGGCATTCTACTATTGATTCTTTATTTCACT-CTATA  49
      ||||||||||||||||||||||||   |||||||||| |||||| |||||
seq2  CAGTTTAGAACTGTGGCATTCTACATATGATTCTTTA-TTCACTCCTATA  49

seq1  AATATTCTAATACTGTTGA--TTCCCACAAAGGGAAATGTTCCCAAATCA  97
      |||||| ||||||||||||  | ||||||||||| |||||||||||||||
seq2  AATATT-TAATACTGTTGAATTCCCCACAAAGGGGAATGTTCCCAAATCA  98

seq1  TTCCGGTTT-CTTGTTCTGAGG-ATCTTATTCTTT-CCTGATATCGGCAC  144
      || |||||| |||||||||||| |||||||||||| ||||||||||||||
seq2  TTTCGGTTTCCTTGTTCTGAGGAATCTTATTCTTTCCCTGATATCGGCAC  148

seq1  CCAGTTTTCGTTAGGAAAACTTATC-ATGGC-ATCACTTAGAGCTGATCA  192
      ||||||||||||||||||||||||| ||| | ||||||||||||||||||
seq2  CCAGTTTTCGTTAGGAAAACTTATCAATGACAATCACTTAGAGCTGATCA  198

seq1  CTTAGAGGCAACTCTGTGCTGGCTACAGAGTTTATACTCTAGAGGTGAGT  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAGGCAACTCTGTGCTGGCTACAGAGTTTATACTCTAGAGGTGAGT  248

seq1  AATTCCCAAAAACTGGTCTTCCTTTGATTTTACTTTTTTATCATGTATAT  292
      |||||||||||||||||| |||||||||||||||||||||||| ||||||
seq2  AATTCCCAAAAACTGGTC-TCCTTTGATTTTACTTTTTTATCAAGTATAT  297

seq1  TATATAGTGCTATGGTATCTGACTAAAGGTTAAAACCTGTGAATATGTG-  341
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TATATAGTGCTATGGTATCTGACTAAAGGTTAAAACCTGTGAATATGTGT  347

seq1  TTCAATAAGATTGTTTGG-AAAACTAGTAACATTCAATG-AAAAAAATGA  389
      |||||||||| ||||||| |||||||||||||||||||| ||||||||||
seq2  TTCAATAAGA-TGTTTGGAAAAACTAGTAACATTCAATGAAAAAAAATGA  396

seq1  CTTCATAGCCAGTCATTGTGGAGCATGCCTTTAATCTCAGCACCTGGGAG  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATAGCCAGTCATTGTGGAGCATGCCTTTAATCTCAGCACCTGGGAG  446

seq1  GCAAAGGCAAGCAGATATATGAGTTCAGGGCTAGCCTGGTCTACATAGCA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGGCAAGCAGATATATGAGTTCAGGGCTAGCCTGGTCTACATAGCA  496

seq1  AGTTCTAAATAGAGACACCCTGTCTCAAACAACTCAAAACAAACAAATAG  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTAAATAGAGACACCCTGTCTCAAACAACTCAAAACAAACAAATAG  546

seq1  ATAGATTCTGTAACTCCCCCCTACTAAATGATTGATACATGCTGTCCTTC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTCTGTAACTCCCCCCTACTAAATGATTGATACATGCTGTCCTTC  596

seq1  CTGTTGGACTCTGAGCTTTTTGGAGGTCATGTTTCTGTCTGACCAAGTAC  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGGACTCTGAGCTTTTTGGAGGTCATGTTTCTGTCTGACCAAGTAC  646

seq1  CACCACTGCACTTCCTGTGACTGTGATTCCAAGGTATGCTTTTGAAAAAC  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACTGCACTTCCTGTGACTGTGATTCCAAGGTATGCTTTTGAAAAAC  696

seq1  TAAAAGCATAACTAGATAGACAGAAGCTCTGACGTGATGCTCAGTCAAAA  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCATAACTAGATAGACAGAAGCTCTGACGTGATGCTCAGTCAAAA  746

seq1  CTGGAAGTCCTGGGTTTCACATTCTAAACAGTTATCAAACCAACAGCTGC  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGTCCTGGGTTTCACATTCTAAACAGTTATCAAACCAACAGCTGC  796

seq1  CCTAAGGGGAGCTTTGGAGAACAGAGGGGACCTCAGTGAGGATGAGTAGA  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGGGGAGCTTTGGAGAACAGAGGGGACCTCAGTGAGGATGAGTAGA  846

seq1  GCCAAGGATGAAAGGAATGAAAGGTAACAGGAAGGTAACTTAAAGCTCAT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGGATGAAAGGAATGAAAGGTAACAGGAAGGTAACTTAAAGCTCAT  896

seq1  GCAAGGAATGTTTTTCCCAGAGCTAAAGCTACACTGCTTATGAGCAATGG  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGAATGTTTTTCCCAGAGCTAAAGCTACACTGCTTATGAGCAATGG  946

seq1  AAGTATTGAAAGGCAGACTAAGCAAACGTGGGAGTGAGCAGTAGTGCTGG  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTGAAAGGCAGACTAAGCAAACGTGGGAGTGAGCAGTAGTGCTGG  996

seq1  CAGCACCTGCTGACCTGGGATTAAAGTTTCTTTCAGCTCACTGCCAGACC  1039
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CAGCACCTGCTGACCTGGGATTAAAGTTTCTCTCAGCTCACTGCCAGACC  1046

seq1  CCAGGTCTTAGGTGGCAGGCAAAAGAATTC  1069
      |||||||||||| |||||||||||||||||
seq2  CCAGGTCTTAGG-GGCAGGCAAAAGAATTC  1075

seq1: chr7_111024976_111025916
seq2: B6Ng01-016G09.g_64_997

seq1  GAATTCCTACACCTAAGACACTGTGGAAGAGCAGGTGGAAAGAGTGGAAG  50
      |||||||| ||||||||||||||||||| |||||||||||||||||||||
seq2  GAATTCCTGCACCTAAGACACTGTGGAACAGCAGGTGGAAAGAGTGGAAG  50

seq1  AGACTAAGGATTATGGACTTTGCTTTGAGACTCTCTCTCCTAGTGATGTC  100
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTAACGATTATGGACTTTGCTTTGAGACTCTCTCTCCTAGTGATGTC  100

seq1  AGAAGTGTCATCCATAAAGTGTCGCCAGCACAACTTCCTAAACAGTATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGTCATCCATAAAGTGTCGCCAGCACAACTTCCTAAACAGTATCT  150

seq1  GAACAAGGAACAAAAGCTAATATGGACTCCAAAGTGGACTGGAGTAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAGGAACAAAAGCTAATATGGACTCCAAAGTGGACTGGAGTAAACT  200

seq1  TATAAAGCCTCTGCTCTACCCAAAGAAATAAGCAGGCAACAAAGAAGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGCCTCTGCTCTACCCAAAGAAATAAGCAGGCAACAAAGAAGCAC  250

seq1  TATGAGGCCTCCTACCTCTCCCTATAGAGTTTCTCTAACCCCTTCAACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGGCCTCCTACCTCTCCCTATAGAGTTTCTCTAACCCCTTCAACTG  300

seq1  TCATCCATTTTATTGTGGAGGTTAGCAGAAATGTAGAGCTCCATTTGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCATTTTATTGTGGAGGTTAGCAGAAATGTAGAGCTCCATTTGAGG  350

seq1  TGTAATGAATGACTGAATATGTTACTGTTTCTCTTGACCAACACAAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATGAATGACTGAATATGTTACTGTTTCTCTTGACCAACACAAGAAA  400

seq1  GTAGATTGGTCCATACACTATTTCTATAGATAAATCCACCTTGTCCTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATTGGTCCATACACTATTTCTATAGATAAATCCACCTTGTCCTTTT  450

seq1  TTTTTTTTTTTTTTTTTGGATAAAATACTTAGCCTATGTAAGTCACCTAT  500
      ||||||||||||||||||||||||||||||| ||| ||||| || |||| 
seq2  TTTTTTTTTTTTTTTTTGGATAAAATACTTACCCTTTGTAACTCCCCTAA  500

seq1  ATAGGGACCAAACTCGTCGTAGTAATGAAAAGAAACTTGAAGGTTCTCCT  550
      |||||||||||||||| || |  |||||||||||||||||| ||||||||
seq2  ATAGGGACCAAACTCGGCGAATGAATGAAAAGAAACTTGAATGTTCTCCT  550

seq1  GAGAATCAAAAACTGAAGTTCTTAGAATAAAGATTGGCAATCACCATCAT  600
      ||||||| |||||||||||||||  |||||| ||||||||||||||||||
seq2  GAGAATC-AAAACTGAAGTTCTTCCAATAAATATTGGCAATCACCATCAT  599

seq1  TCTATTATATCCTAAATTCACATGACGCTGTAAACTCTGTTTGCTTTACT  650
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCTATTATATCCTAAATTCACATGACGCTGAAAACTCTGTTTGCTTTACT  649

seq1  ATACTTTGCTGTTACGGTGGAGGTG-AAGGCTAATGCATCATGATAGTG-  698
      ||||||||||||||||||||||||| ||||| ||||| |||||||| || 
seq2  ATACTTTGCTGTTACGGTGGAGGTGAAAGGCCAATGCCTCATGATAATGC  699

seq1  CCTAAGTTTAG-CCTCTAATTAATTTTTCACCTTTTATTTCTTGCTCCTC  747
      || |||||||| ||||| ||||||||||| ||||||||||||||||||||
seq2  CCAAAGTTTAGCCCTCT-ATTAATTTTTCCCCTTTTATTTCTTGCTCCTC  748

seq1  ATCTTTCAACAATGCTCTGAATTCAGCTGGTTAGTGAAGATAACATTTGA  797
      ||||||| |||||| |||||||||  || | ||| ||| || ||||||||
seq2  ATCTTTC-ACAATGGTCTGAATTC-CCTAGATAGAGAA-AT-ACATTTGA  794

seq1  TGCTGAAGCAGAGAGGC-ATGGATAGACTATCAGAGAAGTCAAGGCCAGT  846
      |||| || || | ||||  |||||| |||| |||| ||||| ||||| ||
seq2  TGCTCAAACA-AAAGGCTTTGGATATACTA-CAGAAAAGTC-AGGCCCGT  841

seq1  GAATACAGCAGGAGAATCTGTCTGAAGCCAGATAACATGAGTACTTTGAA  896
      |||  | | ||||||||||| ||||| ||||  |||  || |||||||||
seq2  GAAATCCGTAGGAGAATCTG-CTGAA-CCAGTAAACTGGAATACTTTGAA  889

seq1  AAGGTGTCTCAAAAGATAAGAGAC-CGAAGAAAAGGAGAATGAAAA  941
      | |||| ||  ||| |||| | || |||  ||| ||||||||||||
seq2  ATGGTGCCTTCAAA-ATAAAAAACTCGAGAAAAGGGAGAATGAAAA  934