BAC Information

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BAC

Clone NameB6Ng01-016J18
Chromosome7 (Build37)
Map Location 84,506,029 - 84,507,180
singlet/doubletsinglet
Overlap genenone
Upstream geneEG244071
Downstream geneA330068G13Rik, Ntrk3
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016J18.bB6Ng01-016J18.g
ACCDH850528DH850529
length1,2351,141
definitionDH850528|Mus musculus domesticus DNA, BAC clone: B6Ng01-016J18, 5' end.DH850529|Mus musculus domesticus DNA, BAC clone: B6Ng01-016J18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaccagacattcaaagaagagctaataccaatacccttcaaact
atcacataaaatagaaacagaaggaacactgccaaactcattctatgagg
acacagtcaccctgatatctaactacacaaagacttaacaaagaaagaga
atttcaaaccaatttaccttatgaacactgatgcaaaaataataaatact
ggtaaaccaaattaaaaaataaataaaaaacatcattcaccatgatcaga
taagctcatcccagggatgcaggggtagttcaatatatgagaatcaatca
gtgcaatccaccatataaacaaagtgaaaggaaaacaaacaaactgacga
acgaaaaaacacatggtcatcttactagatgctgaaaaatcctttgacaa
cactcaacacaccttcatgcttaaagtcttagggagaaaagggatacaag
gtgcatacctaaacacaataaaggcagtatactgcaagccaatagccaac
atcaaattacacggagagaaaggtaaaaacaattccactaaaattagaga
cgggggaagggtgtccattctccccctttctcctcaataggcgagtaatg
ttcttactagagtgataagacagctgaaggagatcaggggtgggcaaatt
gggaaggaaaatgtcaaatttggaaaagcagaagtcaaaatgtactgttt
gatgtttttagatgttatgatagtacacataggtgatcccaaagttgtat
caagagctcctacagctttaaacacagagtagttaatttaaggtcaaaat
ccagcttcatctctcgtcagaatgcaagttctttctctatagagttaaaa
taaatattaacaattatctcaaattagtagatttttcattctatgatctc
ttaaaatcaagggctatcactctgattctttctattttttttaacagaat
atatgttatgttagtgtctttcttcctatcttctttagttaagtttaaat
tagatttattctttgagtgatcataagatatcagcacagaaaataatcca
gttataggagatgttaaatatgaagaaaaaaatcaaaattcaactcagct
tcataaatctgaaatgttcatttgatgaatttaacctgttaattagaatc
agaaaattcctataataggcttaagctgccgatgaatttattgaatcagt
aaggtcctggttttctcgagctcacacccacagta
gaattcttaactgtcagtcacttggccagccagtagactgcttcacagag
agtctgattcacttaaacacattgaggagatgggatggataatcattcca
ttcataagataatataattatccttctcataattggccactgacccttca
ttgcaactacatatttatagagcctctcccatacttctgctttgcctgtt
catttttccatgttctaccccagtaaaacatagccttttctttttttctt
tttttctttttttctttttttctttttaaaaatcttttacaagaggccaa
aatatctggacatatttttcctgtaggtgcctcaccttctttttgacatt
ctcacctcctgtatgttgcagttgcttgcagagctgtgttgaccaaggct
ttctctcttcttcatctctcttgacttagtaattaccaagattttcatcc
tgcttgttctgttattttcatctcaaactctaacaaaagtatacttgagc
ttctttctgtgtctgtttctaaattcttatattaaagaagactaagaacc
taaaaagagtctttgattttcccaccaacaatggtcctaggttcagtttc
tagcatatatccatctcacctccaacatacagacatggttgggatttcaa
tatggaaaacatatgcataggtctggattcaggaataagtgttttttaaa
agataaaggcaaagcttagcaattaatgactcaaaaaacattggaaggag
tacattgaggcagcacaaatgaaataaggtaagtgcaataaaaacacaaa
gacactacattttgaaattaaactgcaaagaatattatttaaagctacat
taaaaactatagtcacatgtgaagcttaaagcagtttttgcttggttgtg
ggagaaagattggattggatacagtgttcacggcagtagagtgaaaaaga
ctgttgtcattggttccatgagagatagctacaatttaattaaggataat
aaaattactacaatggatggactctggggacagttagtgatgcttcttat
caactctggaagatgaaacatggatctagtagaataaggccctctttaga
gactgacctctaagtttctggatcttaaaaaaatgggtgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_84506029_84507180
seq2: B6Ng01-016J18.g_69_1209

seq1  GAATTCTTAACTGTCAGTCACTTGGCCAGCCAGTAGACTGCTTCACAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAACTGTCAGTCACTTGGCCAGCCAGTAGACTGCTTCACAGAG  50

seq1  AGTCTGATTCACTTAAACACATTGAGGAGATGGGATGGATAATCATTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGATTCACTTAAACACATTGAGGAGATGGGATGGATAATCATTCCA  100

seq1  TTCATAAGATAATATAATTATCCTTCTCATAATTGGCCACTGACCCTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAAGATAATATAATTATCCTTCTCATAATTGGCCACTGACCCTTCA  150

seq1  TTGCAACTACATATTTATAGAGCCTCTCCCATACTTCTGCTTTGCCTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAACTACATATTTATAGAGCCTCTCCCATACTTCTGCTTTGCCTGTT  200

seq1  CATTTTTCCATGTTCTACCCCAGTAAAACATAGCCTTTTCTTTTTTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTCCATGTTCTACCCCAGTAAAACATAGCCTTTTCTTTTTTTCTT  250

seq1  TTTTTCTTTTTTTCTTTTTTTCTTTTTAAAAATCTTTTACAAGAGGCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTTTTTTCTTTTTTTCTTTTTAAAAATCTTTTACAAGAGGCCAA  300

seq1  AATATCTGGACATATTTTTCCTGTAGGTGCCTCACCTTCTTTTTGACATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTGGACATATTTTTCCTGTAGGTGCCTCACCTTCTTTTTGACATT  350

seq1  CTCACCTCCTGTATGTTGCAGTTGCTTGCAGAGCTGTGTTGACCAAGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCTCCTGTATGTTGCAGTTGCTTGCAGAGCTGTGTTGACCAAGGCT  400

seq1  TTCTCTCTTCTTCATCTCTCTTGACTTAGTAATTACCAAGATTTTCATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTTCTTCATCTCTCTTGACTTAGTAATTACCAAGATTTTCATCC  450

seq1  TGCTTGTTCTGTTATTTTCATCTCAAACTCTAACAAAAGTATACTTGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTTCTGTTATTTTCATCTCAAACTCTAACAAAAGTATACTTGAGC  500

seq1  TTCTTTCTGTGTCTGTTTCTAAATTCTTATATTAAAGAAGACTAAGAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTGTGTCTGTTTCTAAATTCTTATATTAAAGAAGACTAAGAACC  550

seq1  TAAAAAGAGTCTTTGATTTTCCCACCAACAATGGTCCTAGGTTCAGTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGAGTCTTTGATTTTCCCACCAACAATGGTCCTAGGTTCAGTTTC  600

seq1  TAGCATATATCCATCTCACCTCCAACATACAGACATGGTTGGGATTTCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATATATCCATCTCACCTCCAACATACAGACATGGTTGGGATTTCAA  650

seq1  TATGGAAAACATATGCATAGGTCTGGATTCAGGAATAAGTGTTTTTTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAAACATATGCATAGGTCTGGATTCAGGAATAAGTGTTTTTTAAA  700

seq1  AGATAAAGGCAAAGCTTAGCAATTAATGACTCAAAAAACATTGGAAGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAGGCAAAGCTTAGCAATTAATGACTCAAAAAACATTGGAAGGAG  750

seq1  TACATTGAGGCAGCACAAATGAAATAAGGTAAGTGCAATAAAAACACAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTGAGGCAGCACAAATGAAATAAGGTAAGTGCAATAAAAACACAAA  800

seq1  GACACTACATTTTGAAATTAAACTGCAAAGAATATTATTTAAAGCTACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTACATTTTGAAATTAAACTGCAAAGAATATTATTTAAAGCTACAT  850

seq1  TAAAAACTATAGTCACATGTGAAGCTTAAAGCAGTTTTTGCTTGGTTGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACTATAGTCACATGTGAAGCTTAAAGCAGTTTTTGCTTGGTTGTG  900

seq1  GGAGAAAGAATGGATTGGATACAGTGTTCACGGCAGTAGAGTGAAAAAGA  950
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAGATTGGATTGGATACAGTGTTCACGGCAGTAGAGTGAAAAAGA  950

seq1  CTGTTGTCATTGGTTCCAATGAGAGATAGCTACAATTTAATATAGGATAA  1000
      ||||||||||||||||| |||||||||||||||||||||||  |||||||
seq2  CTGTTGTCATTGGTTCC-ATGAGAGATAGCTACAATTTAATTAAGGATAA  999

seq1  TAAAAATTACATAACAAATGGATGGACTCTGGGGACAGTTAGGTGATGCT  1050
      | |||||||| ||   ||||||||||||||||||||||||| ||||||||
seq2  T-AAAATTAC-TA--CAATGGATGGACTCTGGGGACAGTTA-GTGATGCT  1044

seq1  TCTATAACAAACTTCTGGAAGATGAAACATGGATCTTAAGTAAGATAAAA  1100
      ||| || |||   |||||||||||||||||||||||  ||||  ||||  
seq2  TCT-TATCAA--CTCTGGAAGATGAAACATGGATCT--AGTAGAATAAGG  1089

seq1  GCCTCCTATGAGACTGA-CTCTTAGATTTCT-GATCTATAAAAAAATGGG  1148
       |||| |  |||||||| |||| || ||||| ||||| ||||||||||||
seq2  CCCTCTTTAGAGACTGACCTCTAAG-TTTCTGGATCT-TAAAAAAATGGG  1137

seq1  TGCT  1152
      ||||
seq2  TGCT  1141