BAC Information

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BAC

Clone NameB6Ng01-016K13
Chromosome7 (Build37)
Map Location 128,887,363 - 128,888,449
singlet/doubletsinglet
Overlap geneScnn1g
Upstream geneE030013G06Rik, EG436008, LOC100043426, Eef2k, Polr3e, Cdr2, 4933427G17Rik, EG668548, Mettl9, LOC668456, Igsf6, Otoa, LOC668556, Hs3st2, Usp31
Downstream geneScnn1b, Cog7, Gga2, Ears2, Ubfd1, Ndufab1, Palb2, Dctn5, Plk1, Ern2, 2010110P09Rik, Prkcb1, LOC668486, Cacng3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016K13.bB6Ng01-016K13.g
ACCDH850562DH850563
length1,078945
definitionDH850562|Mus musculus domesticus DNA, BAC clone: B6Ng01-016K13, 5' end.DH850563|Mus musculus domesticus DNA, BAC clone: B6Ng01-016K13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccattggcttggcatggtgctgcagtatgcgtacctgaaccgtc
agtattcaggaggccaagataggaagctcacaagtttgaggccatcctgg
gctatctggcgagactctatctcaaaataaacaggggctgagagcatagc
ttggtagcagagtgctttccccaccatatgcaagacccttagttggatcc
tcagaagcacagaaaagatgtagaggatatgttcttgtgaggaaaccaag
ccaatctgctacagtcttaccttccttaccaagtagaagttagcagaaag
agaactgtcataaaggactgtggtagttgtatgcacagtgtgtgtgtggc
tggtgtgtgtaccctccctagaccagattcactggctgaaatgccagcct
ccatgtaaaggtatttggagatagggcactaattaaggatcaatgagatc
ttaaggtcctggctctaatctgataggcttggtatccttataaaaaggtg
agacatcacagtaccctcttgagagagaggaagggccatgtgaggatacc
tgcaaaagatggccatctgtgaccaagaagagaaagaagtcttatctgaa
tccacaagtgccaggaccttgaccttgaatgtccaatctttagcattatg
agaaattaatatctattgttgatgccactcaaactatagtactttgttat
ggtggcttgagatcttattctaagagctctgaataggagggtatggtagc
tactgttattgttctcaaaggacagtaaccaaggtcacacagtgagaggc
agacctggggtttggctccagaatcatctgtcatcttaactaagctaaag
gtgtgtctgcccgcttaatctcctactcagcccatctgggtttagccctg
tttagacgccacctgcctgggattagtcaccccagcagagggtttgccag
ctgaagggagcccagcagtgtcactgtagctcttcccaaagataaagagt
cagaaagaaacgcccattgcgaaaaaagatgacagggatgctcatgcatg
cattgggagagggaagaatgccttgctt
gaattcagaactcttcagctggggaacggtggtaataaagtgttcccaca
acacagactgttgagaaggattcaactgcgtgaattcagaactcttcagc
tggggaatggtggtaatgaagtgttcccgtaaaacagactgttgagaagg
attcaactgcgtgaattcagaactcttcagctggggaacagggtacccgt
aagtatagctttacaaggtaagtctggtcttgaactttctaacgaaattc
aagacagtctatcagaagtaaagtggggaatagctttacaaggtacgtct
ggccttgaactttctaacgaaattcaagacagtctatcagaagtaaagtg
ggaaatagctttacaaggtatgtttggccttaaactttctctagtgttag
aagcccttttgttccttttcacatgttatcaagcggttaaggcagggctg
aaaattctggatgaaattcagggcaatctatcagaagtaaagcggggaga
gagagtaggagcaaagaggaaatatggttcacaaaataagtatacaggtc
tttccacgggtcttgaacctgaggaaatgttaaggtcaggtaagaatacc
tggggagagattagaaggaaggagaaggaaaaagaaaagaaaaaagatca
attagcggaggtttctaggagaaggagcctatacccatcactagatgagc
tcaaggagccagttcttagtagttctgaatcagatgaaaaggctattagg
gcctggaaggcgctctcccgagcaggtgaagccactggacaactaaacaa
agatcatccagagacctcaggagtccttctcagattttgtggccagaatg
acagaaggcagcagagcgtatttttggagattagagcaagcccccacctc
tggtagaacagtttaattatgaacaagccattacaggagtgccga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_128887363_128888449
seq2: B6Ng01-016K13.b_40_1117 (reverse)

seq1  AAGCAAAGGCATTCTTTCCCTCTCCCAATGCATGCATGAGCATCCCTGTT  50
      |||| ||||||||| ||||||||||||||||||||||||||||||||| |
seq2  AAGC-AAGGCATTC-TTCCCTCTCCCAATGCATGCATGAGCATCCCTG-T  47

seq1  CATTCTTTTCTCCGCAATGGGCGTTTTCTTTTCTGACTTCTTTATCTTTG  100
      || |||||| | ||||||||||||||   |||||||| ||||||||||||
seq2  CA-TCTTTT-TTCGCAATGGGCGTTT--CTTTCTGAC-TCTTTATCTTTG  92

seq1  GG-AGAGCTACAGTGACACTGCTGGGCTCCCTTCAGCTGGCAAACCACTC  149
      || ||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGAAGAGCTACAGTGACACTGCTGGGCTCCCTTCAGCTGGCAAACC-CTC  141

seq1  TTGCTGGGGTGACTAATCCCAGGCAGGTGGCGTCTAAACAGGGCTAAACC  199
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TGCTGGGGTGACTAATCCCAGGCAGGTGGCGTCTAAACAGGGCTAAACC  190

seq1  CAGATGGGCTGAGTAGGAGATTAAGCGGGCAGACACACCTTTAGCTTAGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGGCTGAGTAGGAGATTAAGCGGGCAGACACACCTTTAGCTTAGT  240

seq1  TAAGATGACAGATGATTCTGGAGCCAAACCCCAGGTCTGCCTCTCACTGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATGACAGATGATTCTGGAGCCAAACCCCAGGTCTGCCTCTCACTGT  290

seq1  GTGACCTTGGTTACTGTCCTTTGAGAACAATAACAGTAGCTACCATACCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCTTGGTTACTGTCCTTTGAGAACAATAACAGTAGCTACCATACCC  340

seq1  TCCTATTCAGAGCTCTTAGAATAAGATCTCAAGCCACCATAACAAAGTAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATTCAGAGCTCTTAGAATAAGATCTCAAGCCACCATAACAAAGTAC  390

seq1  TATAGTTTGAGTGGCATCAACAATAGATATTAATTTCTCATAATGCTAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTTGAGTGGCATCAACAATAGATATTAATTTCTCATAATGCTAAA  440

seq1  GATTGGACATTCAAGGTCAAGGTCCTGGCACTTGTGGATTCAGATAAGAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGACATTCAAGGTCAAGGTCCTGGCACTTGTGGATTCAGATAAGAC  490

seq1  TTCTTTCTCTTCTTGGTCACAGATGGCCATCTTTTGCAGGTATCCTCACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTCTTCTTGGTCACAGATGGCCATCTTTTGCAGGTATCCTCACA  540

seq1  TGGCCCTTCCTCTCTCTCAAGAGGGTACTGTGATGTCTCACCTTTTTATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCTTCCTCTCTCTCAAGAGGGTACTGTGATGTCTCACCTTTTTATA  590

seq1  AGGATACCAAGCCTATCAGATTAGAGCCAGGACCTTAAGATCTCATTGAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATACCAAGCCTATCAGATTAGAGCCAGGACCTTAAGATCTCATTGAT  640

seq1  CCTTAATTAGTGCCCTATCTCCAAATACCTTTACATGGAGGCTGGCATTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAATTAGTGCCCTATCTCCAAATACCTTTACATGGAGGCTGGCATTT  690

seq1  CAGCCAGTGAATCTGGTCTAGGGAGGGTACACACACCAGCCACACACACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGTGAATCTGGTCTAGGGAGGGTACACACACCAGCCACACACACA  740

seq1  CTGTGCATACAACTACCACAGTCCTTTATGACAGTTCTCTTTCTGCTAAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCATACAACTACCACAGTCCTTTATGACAGTTCTCTTTCTGCTAAC  790

seq1  TTCTACTTGGTAAGGAAGGTAAGACTGTAGCAGATTGGCTTGGTTTCCTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTTGGTAAGGAAGGTAAGACTGTAGCAGATTGGCTTGGTTTCCTC  840

seq1  ACAAGAACATATCCTCTACATCTTTTCTGTGCTTCTGAGGATCCAACTAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAACATATCCTCTACATCTTTTCTGTGCTTCTGAGGATCCAACTAA  890

seq1  GGGTCTTGCATATGGTGGGGAAAGCACTCTGCTACCAAGCTATGCTCTCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTTGCATATGGTGGGGAAAGCACTCTGCTACCAAGCTATGCTCTCA  940

seq1  GCCCCTGTTTATTTTGAGATAGAGTCTCGCCAGATAGCCCAGGATGGCCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTGTTTATTTTGAGATAGAGTCTCGCCAGATAGCCCAGGATGGCCT  990

seq1  CAAACTTGTGAGCTTCCTATCTTGGCCTCCTGAATACTGACGGTTCAGGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTGTGAGCTTCCTATCTTGGCCTCCTGAATACTGACGGTTCAGGT  1040

seq1  ACGCATACTGCAGCACCATGCCAAGCCAATGGGAATTC  1087
      ||||||||||||||||||||||||||||||||||||||
seq2  ACGCATACTGCAGCACCATGCCAAGCCAATGGGAATTC  1078