BAC Information

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BAC

Clone NameB6Ng01-017G21
Chromosome7 (Build37)19 (Build37)
Map Location 22,272,854 - 22,273,84141,435,813 - 41,435,846
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100042980, EG381936, LOC100043559, LOC667311, LOC100043561, LOC667302, EG667292, LOC100043566, LOC100043569, EG436135, LOC100042996, EG667273, EG667268, EG667262, EG667259, LOC100043574, LOC100043576, Gm1447, LOC100043006, LOC100043583, EG435953, LOC673902, EG667240, EG435951, Gm1446, LOC381937, LOC100043588, LOC670764, EG667215, LOC100043013, LOC621561, EG667199, EG621510, LOC667186, EG628475, LOC100043595
Downstream geneLOC100043596, LOC667358, LOC100043016, LOC100043602, LOC100043604, EG667378, LOC100043607, LOC100043019, LOC100043025, EG667404, EG435940, LOC100043026, EG545929, LOC667421, LOC100043614, LOC667431, LOC100043029, EG620736, EG667444, LOC100043033, LOC100043037, EG667464, EG667469, EG667472, EG667094, LOC100043625, LOC100043626, LOC100043043, LOC100043048, LOC100043632, EG667485, V1rd14, LOC100043051, LOC100043058
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017G21.bB6Ng01-017G21.g
ACCDH851118DH851119
length993599
definitionDH851118|Mus musculus domesticus DNA, BAC clone: B6Ng01-017G21, 5' end.DH851119|Mus musculus domesticus DNA, BAC clone: B6Ng01-017G21, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(22,272,854 - 22,273,841)(41,435,813 - 41,435,846)
sequence
gaattctttgttcagctctgagtcccattttttaatggggttatttgatt
ttctggagtccaccttcctgagttctttatatatattggatattagtccc
ctatctgatttgggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttatcaacggtgtcttttgctttgcagaagctctgcaatttta
tgaggtcccatttattgattcttgatcttacagcacaagccattgctctt
ctattcaggaatttttcccctgtaaccatatcaggtatgagaagaaactt
cttcggtttttccatgaaagttccaagaccaggatttcccatctagcatt
tctgacactcacagtcaccagctctatatcatcacttgttccagtccttc
tgtgctcaaggttgttttgacagttggtatgaagcagacaattgtaggag
gactagtttggtcttgggagaaaataccaactggattgatgaggtgacag
aatgacaggcttgcctgtgcaagtgcaatatttgctcattttctgactgc
atttccatcttagcatgacaggaatttctggtgactggaagaatctattc
actttggctcaaagtgaagccattgacagtctacagggggaaaatgttga
gtctggatctgggtcacctcccctggttggaaggttgttgattgaccctc
ttccagtaccagataaagtttgtgtagtcctggctgtcctagaacttgct
ctgtagaggaagctggccttgaactcaacagagtgagtgcctgagctccc
caagtgctggcattaaatgtgtgtacgaccacagccttagctataagttg
gaagactgtaaatcttttcaggaactatgagtgttagtttccttgtgctt
aaaaataaaacctatctgtactttttttgtcatcttgagacaagtttagt
taacctggggaacaggaaaactcattgcacaaatacattccat
gaattcataaaactcaagaggaacgaagaccaaagtgtgcatacttttcc
ctttgttagaattgggaacaaaacacccatggaaggagttgcagggacca
agtttggagctgagacaaaaggatcgtccaattagagactgacatatctg
ggaatccattccatagtcagcctccaaacgctgacaccattgcatacact
agcaagattttgctgaaaggagactgatatagatgtctcttgtgacgcta
ttccggggcctagcaaacacagaagtgcatgctcacagtcagttactgga
tggatcacatggcccccaatggatgagctagagaaagtaatcaaggagca
taagggatctgcaaccctataggtggaacaacaatatgaactaaccagta
ccccggagctcttgtctctatctgcattatgtatcagatgatatcctagt
cggccatcagtggaaagagaggcccattggtcatgcaaactttatatgcc
tcagtatagaggaaagccagaaccaagaagtgggagtgggtgggagagca
cttgggggactattgggatagcattggaaatgttaatgaaataaatacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_22272854_22273841
seq2: B6Ng01-017G21.b_46_1038

seq1  GAATTCTTTGTTCAGCTCTGAGTCCCATTTTTTAATGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGCTCTGAGTCCCATTTTTTAATGGGGTTATTTGATT  50

seq1  TTCTGGAGTCCACCTTCCTGAGTTCTTTATATATATTGGATATTAGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGTCCACCTTCCTGAGTTCTTTATATATATTGGATATTAGTCCC  100

seq1  CTATCTGATTTGGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGATTTGGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCT  150

seq1  TTTTGTCTTATCAACGGTGTCTTTTGCTTTGCAGAAGCTCTGCAATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTATCAACGGTGTCTTTTGCTTTGCAGAAGCTCTGCAATTTTA  200

seq1  TGAGGTCCCATTTATTGATTCTTGATCTTACAGCACAAGCCATTGCTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTCCCATTTATTGATTCTTGATCTTACAGCACAAGCCATTGCTCTT  250

seq1  CTATTCAGGAATTTTTCCCCTGTAACCATATCAGGTATGAGAAGAAACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCAGGAATTTTTCCCCTGTAACCATATCAGGTATGAGAAGAAACTT  300

seq1  CTTCGGTTTTTCCATGAAAGTTCCAAGACCAGGATTTCCCATCTAGCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGGTTTTTCCATGAAAGTTCCAAGACCAGGATTTCCCATCTAGCATT  350

seq1  TCTGACACTCACAGTCACCAGCTCTATATCATCACTTGTTCCAGTCCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACACTCACAGTCACCAGCTCTATATCATCACTTGTTCCAGTCCTTC  400

seq1  TGTGCTCAAGGTTGTTTTGACAGTTGGTATGAAGCAGACAATTGTAGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTCAAGGTTGTTTTGACAGTTGGTATGAAGCAGACAATTGTAGGAG  450

seq1  GACTAGTTTGGTCTTGGGAGAAAATACCAACTGGATTGATGAGGTGACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGTTTGGTCTTGGGAGAAAATACCAACTGGATTGATGAGGTGACAG  500

seq1  AATGACAGGCTTGCCTGTGCAAGTGCAATATTTGCTCATTTTCTGACTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACAGGCTTGCCTGTGCAAGTGCAATATTTGCTCATTTTCTGACTGC  550

seq1  ATTTCCATCTTAGCATGACAGGAATTTCTGGTGACTGGAAGAATCTATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCATCTTAGCATGACAGGAATTTCTGGTGACTGGAAGAATCTATTC  600

seq1  ACTTTGGCTCAAAGTGAAGCCATTGACAGTCTACAGGGGGAAAATGTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGCTCAAAGTGAAGCCATTGACAGTCTACAGGGGGAAAATGTTGA  650

seq1  GTCTGGATCTGGGTCACCTCCCCTGGTTGGAAGGTTGTTGATTGACCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGATCTGGGTCACCTCCCCTGGTTGGAAGGTTGTTGATTGACCCTC  700

seq1  TTCCAGTACCAGATAAAGTTTGTGTAGTCCTGGCTGTCCTAGAACTTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTACCAGATAAAGTTTGTGTAGTCCTGGCTGTCCTAGAACTTGCT  750

seq1  CTGTAGAGGAAGCTGGCCTTGAACTCAACAGAGTGAGTGCCTGAGCTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGAGGAAGCTGGCCTTGAACTCAACAGAGTGAGTGCCTGAGCTCCC  800

seq1  CAAGTGCTGGCATTAAATGTGTGTACGACCACAGCC-TAGCTATAAGTTG  849
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CAAGTGCTGGCATTAAATGTGTGTACGACCACAGCCTTAGCTATAAGTTG  850

seq1  GAAGACTGTAAATC-TTTCAGGAACTATGAGTGTTAG-TTACTTGTGCTT  897
      |||||||||||||| |||||||||||||||||||||| || |||||||||
seq2  GAAGACTGTAAATCTTTTCAGGAACTATGAGTGTTAGTTTCCTTGTGCTT  900

seq1  AAAAATAAAACCTATCTGTAC-TTTTTTGTCATCTAGAGACAAGTTTAAG  946
      ||||||||||||||||||||| ||||||||||||| ||||||||||||  
seq2  AAAAATAAAACCTATCTGTACTTTTTTTGTCATCTTGAGACAAGTTTAGT  950

seq1  TAACCT-GGGAACAGGAAAACTCAATGCAGAAAATACA-TCCAT  988
      |||||| ||||||||||||||||| ||||  ||||||| |||||
seq2  TAACCTGGGGAACAGGAAAACTCATTGCA-CAAATACATTCCAT  993

seq1: chr19_41435813_41435846
seq2: B6Ng01-017G21.g_633_666 (reverse)

seq1  GGTATTTATTTCATTTACATTTCCAATGCTATCC  34
      ||||||||||||||| ||||||||||||||||||
seq2  GGTATTTATTTCATTAACATTTCCAATGCTATCC  34