BAC Information

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BAC

Clone NameB6Ng01-019G06
Chromosome7 (Build37)
Map Location 84,506,029 - 84,623,793
singlet/doubletdoublet
Overlap genenone
Upstream geneEG244071
Downstream geneA330068G13Rik, Ntrk3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019G06.bB6Ng01-019G06.g
ACCDH852488DH852489
length1,0501,032
definitionDH852488|Mus musculus domesticus DNA, BAC clone: B6Ng01-019G06, 5' end.DH852489|Mus musculus domesticus DNA, BAC clone: B6Ng01-019G06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,622,737 - 84,623,793)(84,506,029 - 84,507,074)
sequence
gaattctctttcttttgtatctcttttgaagaacagctctcttatttctg
caagggagccctttatgtggacatgcaaacttcttttctttgtcatagat
atgacaccacaagaaaatattcctgaggaaaatgatattttttgactgtt
tccagagttcagaccaaagaaaccagtttctgacagtgcagaccatatat
tcatgtcactttggtaatctttctagtcattgactctggattgatttaag
ataggtaggagattcacctaaacttcattctctcctccatatatacatgg
atcaaagagacacagtcctcaggaatctagagatttatctattatagagt
tttatgtcaacttgagacaagctagagtcatctgaaaggagagaaagtca
attaagaaaatgcctccataagatcaggtcataggcaagcgtgcaaggca
ttttcttaattagtgattgatgggcagggggacattcagcccattgtgtg
tattgccatctttgggttggaggccctgggttctattagaaagtaggctg
aagaagccatgagaagcaagccagcaagcagcacttctcatagcctctgc
attagttcctgcctccaggttcctgccctgcttggttcctggcctgactt
cctttgattatgaactgcgatgtggaagcataagttgaataaacattttc
ctcctcaagttactttggtgatggtgtttcattccagcaatagtaaccct
atctaagacagtaagtatatactacaagggacaggtggcatggaacatgt
catttttgccttcaaagcatgtagaaaatagtgaggctgacaatcacaga
tatgagaaaactttgtttttgaagaaatggtatagtataattgggattca
gaaaatgagagctgaatcttcaccaggactaggggaagaaacggacactc
attaaattcataccactaaagttacagtggtatagaaatataactgagag
gaagagacaaatggtactgcccaagcactcaaactctgacttgcaccaga

gaattcttaactgtcagtcacttggccagccagtagactgcttcacagag
agtctgattcacttaaacacattgaggagatgggatggataatcattcca
ttcataagataatataattatccttctcataattggccactgacccttca
ttgcaactacatatttatagagcctctcccatacttctgctttgcctgtt
catttttccatgttctaccccagtaaaacatagccttttctttttttctt
tttttctttttttctttttttctttttaaaaatcttttacaagaggccaa
aatatctggacatatttttcctgtaggtgcctcaccttctttttgacatt
ctcacctcctgtatgttgcagttgcttgcagagctgtgttgaccaaggct
ttctctcttcttcatctctcttgacttagtaattaccaagattttcatcc
tgcttgttctgttattttcatctcaaactctaacaaaagtatacttgagc
ttctttctgtgtctgtttctaaattcttatattaaagaagactaagaacc
taaaaagagtctttgattttcccaccaacaatggtcctaggttcagtttc
tagcatatatccatctcacctccaacatacagacatggttgggatttcaa
tatggaaaacatatgcataggtctggattcaggaataagtgttttttaaa
agataaaggcaaagcttagcaattaatgactcaaaaaacattggaaggag
tacattgaggcagcacaaatgaaataaggtaagtgcaataaaaacacaaa
gacactacattttgaaataaactgcaaagaatatatttaaagctacatta
aaaactatagtcacatgtgaagcttaaagcagtttttgcttggttgtggg
agaaagatggatggatacagtgttcacagcagtagagtgaaaagactgtt
gtcattggttcaatgagagatagctacatttatatagaatataaaattca
taacaatggatgactctggggacagtaggtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_84622737_84623793
seq2: B6Ng01-019G06.b_41_1090 (reverse)

seq1  TCTGGTGCAAGTCAGAGTTTGAAGTGGCTTGGGCAGTAACCATCTGTCTC  50
      ||||||||||||||||||||| ||| ||||||||||| ||||| ||||| 
seq2  TCTGGTGCAAGTCAGAGTTTG-AGT-GCTTGGGCAGT-ACCATTTGTCT-  46

seq1  CTTCCTCTCAGTTATATTTCTATTACCACTGTAACTTTAGTTGGTATGAA  100
      |||||||||||||||||||||| ||||||||||||||||| |||||||||
seq2  CTTCCTCTCAGTTATATTTCTA-TACCACTGTAACTTTAG-TGGTATGAA  94

seq1  TTTAATGAGTGTCCGTTTCTTCCCCCTAGTCCTGGTGAAGATTCAGCTCT  150
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTTAATGAGTGTCCGTTTCTT-CCCCTAGTCCTGGTGAAGATTCAGCTCT  143

seq1  CATTTTCTGAATCCCAATTATACTATACCATTTCTTCAAAAACAAAGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTGAATCCCAATTATACTATACCATTTCTTCAAAAACAAAGTTT  193

seq1  TCTCATATCTGTGATTGTCAGCCTCACTATTTTCTACATGCTTTGAAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATATCTGTGATTGTCAGCCTCACTATTTTCTACATGCTTTGAAGGC  243

seq1  AAAAATGACATGTTCCATGCCACCTGTCCCTTGTAGTATATACTTACTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGACATGTTCCATGCCACCTGTCCCTTGTAGTATATACTTACTGT  293

seq1  CTTAGATAGGGTTACTATTGCTGGAATGAAACACCATCACCAAAGTAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGATAGGGTTACTATTGCTGGAATGAAACACCATCACCAAAGTAACT  343

seq1  TGAGGAGGAAAATGTTTATTCAACTTATGCTTCCACATCGCAGTTCATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGGAAAATGTTTATTCAACTTATGCTTCCACATCGCAGTTCATAA  393

seq1  TCAAAGGAAGTCAGGCCAGGAACCAAGCAGGGCAGGAACCTGGAGGCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGAAGTCAGGCCAGGAACCAAGCAGGGCAGGAACCTGGAGGCAGG  443

seq1  AACTAATGCAGAGGCTATGAGAAGTGCTGCTTGCTGGCTTGCTTCTCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAATGCAGAGGCTATGAGAAGTGCTGCTTGCTGGCTTGCTTCTCATG  493

seq1  GCTTCTTCAGCCTACTTTCTAATAGAACCCAGGGCCTCCAACCCAAAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTCAGCCTACTTTCTAATAGAACCCAGGGCCTCCAACCCAAAGAT  543

seq1  GGCAATACACACAATGGGCTGAATGTCCCCCTGCCCATCAATCACTAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATACACACAATGGGCTGAATGTCCCCCTGCCCATCAATCACTAATT  593

seq1  AAGAAAATGCCTTGCACGCTTGCCTATGACCTGATCTTATGGAGGCATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATGCCTTGCACGCTTGCCTATGACCTGATCTTATGGAGGCATTT  643

seq1  TCTTAATTGACTTTCTCTCCTTTCAGATGACTCTAGCTTGTCTCAAGTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATTGACTTTCTCTCCTTTCAGATGACTCTAGCTTGTCTCAAGTTG  693

seq1  ACATAAAACTCTATAATAGATAAATCTCTAGATTCCTGAGGACTGTGTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAACTCTATAATAGATAAATCTCTAGATTCCTGAGGACTGTGTCT  743

seq1  CTTTGATCCATGTATATATGGAGGAGAGAATGAAGTTTAGGTGAATCTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATCCATGTATATATGGAGGAGAGAATGAAGTTTAGGTGAATCTCC  793

seq1  TACCTATCTTAAATCAATCCAGAGTCAATGACTAGAAAGATTACCAAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTATCTTAAATCAATCCAGAGTCAATGACTAGAAAGATTACCAAAGT  843

seq1  GACATGAATATATGGTCTGCACTGTCAGAAACTGGTTTCTTTGGTCTGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGAATATATGGTCTGCACTGTCAGAAACTGGTTTCTTTGGTCTGAA  893

seq1  CTCTGGAAACAGTCAAAAAATATCATTTTCCTCAGGAATATTTTCTTGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGAAACAGTCAAAAAATATCATTTTCCTCAGGAATATTTTCTTGTG  943

seq1  GTGTCATATCTATGACAAAGAAAAGAAGTTTGCATGTCCACATAAAGGGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCATATCTATGACAAAGAAAAGAAGTTTGCATGTCCACATAAAGGGC  993

seq1  TCCCTTGCAGAAATAAGAGAGCTGTTCTTCAAAAGAGATACAAAAGAAAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTGCAGAAATAAGAGAGCTGTTCTTCAAAAGAGATACAAAAGAAAG  1043

seq1  AGAATTC  1057
      |||||||
seq2  AGAATTC  1050

seq1: chr7_84506029_84507074
seq2: B6Ng01-019G06.g_68_1099

seq1  GAATTCTTAACTGTCAGTCACTTGGCCAGCCAGTAGACTGCTTCACAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAACTGTCAGTCACTTGGCCAGCCAGTAGACTGCTTCACAGAG  50

seq1  AGTCTGATTCACTTAAACACATTGAGGAGATGGGATGGATAATCATTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGATTCACTTAAACACATTGAGGAGATGGGATGGATAATCATTCCA  100

seq1  TTCATAAGATAATATAATTATCCTTCTCATAATTGGCCACTGACCCTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAAGATAATATAATTATCCTTCTCATAATTGGCCACTGACCCTTCA  150

seq1  TTGCAACTACATATTTATAGAGCCTCTCCCATACTTCTGCTTTGCCTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAACTACATATTTATAGAGCCTCTCCCATACTTCTGCTTTGCCTGTT  200

seq1  CATTTTTCCATGTTCTACCCCAGTAAAACATAGCCTTTTCTTTTTTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTCCATGTTCTACCCCAGTAAAACATAGCCTTTTCTTTTTTTCTT  250

seq1  TTTTTCTTTTTTTCTTTTTTTCTTTTTAAAAATCTTTTACAAGAGGCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTTTTTTCTTTTTTTCTTTTTAAAAATCTTTTACAAGAGGCCAA  300

seq1  AATATCTGGACATATTTTTCCTGTAGGTGCCTCACCTTCTTTTTGACATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTGGACATATTTTTCCTGTAGGTGCCTCACCTTCTTTTTGACATT  350

seq1  CTCACCTCCTGTATGTTGCAGTTGCTTGCAGAGCTGTGTTGACCAAGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCTCCTGTATGTTGCAGTTGCTTGCAGAGCTGTGTTGACCAAGGCT  400

seq1  TTCTCTCTTCTTCATCTCTCTTGACTTAGTAATTACCAAGATTTTCATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTTCTTCATCTCTCTTGACTTAGTAATTACCAAGATTTTCATCC  450

seq1  TGCTTGTTCTGTTATTTTCATCTCAAACTCTAACAAAAGTATACTTGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTTCTGTTATTTTCATCTCAAACTCTAACAAAAGTATACTTGAGC  500

seq1  TTCTTTCTGTGTCTGTTTCTAAATTCTTATATTAAAGAAGACTAAGAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTGTGTCTGTTTCTAAATTCTTATATTAAAGAAGACTAAGAACC  550

seq1  TAAAAAGAGTCTTTGATTTTCCCACCAACAATGGTCCTAGGTTCAGTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGAGTCTTTGATTTTCCCACCAACAATGGTCCTAGGTTCAGTTTC  600

seq1  TAGCATATATCCATCTCACCTCCAACATACAGACATGGTTGGGATTTCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATATATCCATCTCACCTCCAACATACAGACATGGTTGGGATTTCAA  650

seq1  TATGGAAAACATATGCATAGGTCTGGATTCAGGAATAAGTGTTTTTTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAAACATATGCATAGGTCTGGATTCAGGAATAAGTGTTTTTTAAA  700

seq1  AGATAAAGGCAAAGCTTAGCAATTAATGACTCAAAAAACATTGGAAGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAGGCAAAGCTTAGCAATTAATGACTCAAAAAACATTGGAAGGAG  750

seq1  TACATTGAGGCAGCACAAATGAAATAAGGTAAGTGCAATAAAAACACAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTGAGGCAGCACAAATGAAATAAGGTAAGTGCAATAAAAACACAAA  800

seq1  GACACTACATTTTGAAATTAAACTGCAAAGAATATTATTTAAAGCTACAT  850
      ||||||||||||||||| |||||||||||||||| |||||||||||||||
seq2  GACACTACATTTTGAAA-TAAACTGCAAAGAATA-TATTTAAAGCTACAT  848

seq1  TAAAAACTATAGTCACATGTGAAGCTTAAAGCAGTTTTTGCTTGGTTGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACTATAGTCACATGTGAAGCTTAAAGCAGTTTTTGCTTGGTTGTG  898

seq1  GGAGAAAGAATGGATTGGATACAGTGTTCACGGCAGTAGAGTGAAAAAGA  950
      |||||||| ||||| |||||||||||||||| ||||||||||| ||||||
seq2  GGAGAAAG-ATGGA-TGGATACAGTGTTCACAGCAGTAGAGTG-AAAAGA  945

seq1  CTGTTGTCATTGGTTCCAATGAGAGATAGCTACAATTTAATATAGGATAA  1000
      ||||||||||||||| ||||||||||||||||||  || ||||||   ||
seq2  CTGTTGTCATTGGTT-CAATGAGAGATAGCTACA--TTTATATAG---AA  989

seq1  TAAAAATTACATAACAAATGGATGGACTCTGGGGACAGTTAGGTGA  1046
      || ||| | |||||| ||||||| |||||||||||||| |||||||
seq2  TATAAAATTCATAAC-AATGGAT-GACTCTGGGGACAG-TAGGTGA  1032