BAC Information

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BAC

Clone NameB6Ng01-020F09
Chromosome7 (Build37)
Map Location 31,971,422 - 31,972,344
singlet/doubletsinglet
Overlap genenone
Upstream geneCapns1, Tbcb, Polr2i, Ovol3, Wdr62, EG668354, 1700020L13Rik, Clip3, Alkbh6, AI428936, 0610010E21Rik, Lrfn3, Tyrobp, Hcst, AY078069, Aplp1, Kirrel2, Nphs1, LOC100034728, Prodh2, Gm1082, Snx26, BC053749, Hspb6, 1810054G18Rik, Psenen, U2af1l4, Tmem149, Wbp7, Zbtb32, Upk1a, Cox6b1, Etv2, 3100004P22Rik, 2310022K01Rik, 4930479M11Rik, 2200002J24Rik, EG233075, Atp4a, Tmem147, Gapdhs, Sbsn, Dmkn, Krtdap, Ffar2, Ffar3, Ffar1, Cd22, Mag, Hamp2, Usf2-ps1, Hamp1, Usf2, LOC100043823, Lsr, Tmem162, Fxyd5, Fxyd7, Fxyd1, Lgi4, Fxyd3, Hpn, Scn1b, Gramd1a, LOC672598
Downstream geneLOC100043323, LOC100043827, Apbh, Abpe, LOC100043326, EG384585, LOC100043328, LOC100043331, LOC626181, LOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020F09.bB6Ng01-020F09.g
ACCDH853165DH853166
length920956
definitionDH853165|Mus musculus domesticus DNA, BAC clone: B6Ng01-020F09, 5' end.DH853166|Mus musculus domesticus DNA, BAC clone: B6Ng01-020F09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcaagatgtatttatatattgattcatttgtatgcatgtgcat
gtgtgtaatgataattaaagcaaaggagaccatgaattacagagggagta
ggatggagggaagagagggaaaaatgatgtgaacacaatatacttatatg
caatttgcaaaatctacatgttctatcagcactggcaagggggagcaata
gggttcctggagctcaatgttggccaagatcagctgaatctgtgaggtcc
aggctcattaggagacactctctgaagaaactgaagtgggaaacacattc
acgcctgcacacacgcacgcacgcacgcacgcacgcacgcacacacacac
acacacacacacacacacacacacactgatttttatgtgagacccttgtc
atactggttgccctaaggtcagagaagtaattttcttaggttcctaagaa
aattgtcttcttaggtttctaagaaaatgtcttcttgttttgttttgttc
tgtttcggtattcaattcctttgaaaggatggcatgaaccccatttgtct
ccattttagaaccatccctgattttaaaagcaaagtcaccagctccaaga
acagaccataaattccagtaacaaagtcatacctcccttccctaagaagc
ctggagatgaccataagaatggaaaaactatcttgtctcagggtgagtca
tctgtgttgggcagccctatctcatcctgtggttaatcattttattgaca
taggaatacagaccactgaccacttacttggcacaagccaatcaaagccg
acccctgtgactccctcagcacccacctatgaaattctgatgactaattg
cactctctaatatgaagagttatcttgtagacaactgtataatgttactg
ctttgtttcccagagattat
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggagatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaagatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctggccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggag
caaaacactcttggaaggagttacagagacaaagttttggagctgagata
aaaggatggaccatgtagacactaccatatccggggatccatcccataat
cagcttccaaatgctgacaccatttgcatacactagcaagattatgctga
aaagaccctgatatagctgtctcttgtaaattatgcctgggtctagcaag
cttagagtggatgcttcacattcggctattggattgaatcactggctccc
aatgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_31971422_31972344
seq2: B6Ng01-020F09.b_46_964

seq1  GAATTCAGCAAGATGTATTTATATATTGATTCATTTGTATGCATGTGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAAGATGTATTTATATATTGATTCATTTGTATGCATGTGCAT  50

seq1  GTGTGTAATGATAATTAAAGCAAAGGAGACCATGAATTACAGAGGGAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTAATGATAATTAAAGCAAAGGAGACCATGAATTACAGAGGGAGTA  100

seq1  GGATGGAGGGAAGAGAGGGAAAAATGATGTGAACACAATATACTTATATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGAGGGAAGAGAGGGAAAAATGATGTGAACACAATATACTTATATG  150

seq1  CAATTTGCAAAATCTACATGTTCTATCAGCACTGGCAAGGGGGAGCAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGCAAAATCTACATGTTCTATCAGCACTGGCAAGGGGGAGCAATA  200

seq1  GGGTTCCTGGAGCTCAATGTTGGCCAAGATCAGCTGAATCTGTGAGGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCCTGGAGCTCAATGTTGGCCAAGATCAGCTGAATCTGTGAGGTCC  250

seq1  AGGCTCATTAGGAGACACTCTCTGAAGAAACTGAAGTGGGAAACACATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCATTAGGAGACACTCTCTGAAGAAACTGAAGTGGGAAACACATTC  300

seq1  ACGCCTGCACACACGCACGCACGCACGCACGCACGCACGCACACACACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCTGCACACACGCACGCACGCACGCACGCACGCACGCACACACACAC  350

seq1  ACACACACACACACACACACACACACTGATTTTTATGTGAGACCCTTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACTGATTTTTATGTGAGACCCTTGTC  400

seq1  ATACTGGTTGCCCTAAGGTCAGAGAAGTAATTTTCTTAGGTTCCTAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGGTTGCCCTAAGGTCAGAGAAGTAATTTTCTTAGGTTCCTAAGAA  450

seq1  AATTGTCTTCTTAGGTTTCTAAGAAAATGTCTTCTTGTTTTGTTTTGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTCTTCTTAGGTTTCTAAGAAAATGTCTTCTTGTTTTGTTTTGTTC  500

seq1  TGTTTCGGTATTCAATTCCTTTGAAAGGATGGCATGAACCCCATTTGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCGGTATTCAATTCCTTTGAAAGGATGGCATGAACCCCATTTGTCT  550

seq1  CCATTTTAGAACCATCCCTGATTTTAAAAGCAAAGTCACCAGCTCCAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTAGAACCATCCCTGATTTTAAAAGCAAAGTCACCAGCTCCAAGA  600

seq1  ACAGACCATAAATTCCAGTAACAAAGTCATACCTCCCTTCCCTAAGAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACCATAAATTCCAGTAACAAAGTCATACCTCCCTTCCCTAAGAAGC  650

seq1  CTGGAGATGACCATAAGAATGG-AAAACTATCTTGTCTCAGGGTGAGTCA  699
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTGGAGATGACCATAAGAATGGAAAAACTATCTTGTCTCAGGGTGAGTCA  700

seq1  TCTGTGTTGGGCAGCCCTATCTCATCCTGTGGTTAAACA-TTTATTGACA  748
      |||||||||||||||||||||||||||||||||||| || ||||||||||
seq2  TCTGTGTTGGGCAGCCCTATCTCATCCTGTGGTTAATCATTTTATTGACA  750

seq1  TAGGAATACAGACCACTGACCACCTACTTGGCACAAGCCAATCAGAAGCC  798
      ||||||||||||||||||||||| |||||||||||||||||||| |||||
seq2  TAGGAATACAGACCACTGACCACTTACTTGGCACAAGCCAATCA-AAGCC  799

seq1  GACCCCTGTGACCTCCCCAGCACCCACCAATGAAATTCTAGATGACTTAA  848
      ||||||||||||  || ||||||||||| |||||||||| ||||||| | 
seq2  GACCCCTGTGACTCCCTCAGCACCCACCTATGAAATTCT-GATGACTAAT  848

seq1  TGCACTCTCTAAGTATAGAAGAGCTAACATAGTAGACAACTGTATTAATG  898
      |||||||||||| ||| |||||| || | | ||||||||||||| |||||
seq2  TGCACTCTCTAA-TAT-GAAGAGTTATC-TTGTAGACAACTGTA-TAATG  894

seq1  TTACTGCTTTGGTTCCTAGAGATTA  923
      ||||||||||| |||| ||||||||
seq2  TTACTGCTTTGTTTCCCAGAGATTA  919