BAC Information

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BAC

Clone NameB6Ng01-022E10
Chromosome7 (Build37)
Map Location 6,933,320 - 7,064,725
singlet/doubletdoublet
Overlap geneAurkc, LOC628030, LOC100041822
Upstream geneV1rd6, EG384525, EG269859, Nlrp4c, Zfp787, Zfp444, Galp, Zfp371, EG627821, Zfp667, Zfp583, LOC100042467, LOC100042459, Zfp78, Zfp28, LOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5, Olfr1347, Olfr1348, Olfr1349, LOC665328, Olfr1350, Zim2, Zim1, Peg3, Usp29, LOC627961
Downstream gene5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022E10.bB6Ng01-022E10.g
ACCDH854541DH854542
length941617
definitionDH854541|Mus musculus domesticus DNA, BAC clone: B6Ng01-022E10, 5' end.DH854542|Mus musculus domesticus DNA, BAC clone: B6Ng01-022E10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,063,783 - 7,064,725)(6,933,320 - 6,933,936)
sequence
gaattcactaggtacactggcctctgcctacttctgctgttacagtgctg
ggactaaaggtgtttgcctacacacaatgtcctggatctgtcaagactta
aacatttctgctgccttgacaaatcaaggtaaggtagtgctgagacctga
aaacagctgagtgtctgtgtgggctaaagttatatttaagtttcaattac
tgtgcttgagtcctataaaacaaaaatgcctctcacctttaagccccact
tgcccacggacacataactttctggaatgctagggactgtcacgttttca
cttttgtaaacaaggtcggttgccccaacttgcacaggatctgcttggtc
acacataggcaggagagtatggcctggtgtacatttgccctgcttagatg
aagcaggaagtacatgtctttgtggattttacctttataagcctctgact
aatgtaatttggtgtcatacttcaagcatcctaggtgtgaacccagtcag
tgtccatcatcctggccagtatttaataaagcatgcttcaattttggctc
aagggctggtgaggtggctcagcagataggagcacttgactgctctcccg
aaggtcctgagttcaaatcccagcaaccacatggtggctcataaccaccc
ataatgagatctgatgccctcttctggcacatctgaagacagctgcagtg
tacttctgtataatataaaaaatctttgaaagaaagaaagaaagaaagaa
agaaagaaagaaagaaagatagaaaaacaatttggctcaaaaaaattgtg
gtagtggtcttattctcacctggggaaataacagaaaacacttcaaagag
tgtttttcctttttttttttttttagggatataaaactacccctcatgtt
ggtgttaaactatggctaccacaccttccaggtgtgtaaaa
gaattcttactgtctgcatctcacagccacatgttttttgttgttgttgt
ctgtccttctggttttgtttggggtggttatctttttctcattcattcat
tgatttatcgtggattttttttttttactttatttatttatgtggtatgt
gtatgtatgcatgtaacagcctgatggtagaggtcagaggacaactggag
ggaatcagttctccttccatcttatgagggttcgaggtattgaacttggg
tggtcaggcttagtgactttagccatcttgccagcccagttgttttgttt
ctttttttgttgttgttgttgttgttttagagacagagtctcacatagct
cactttggctttgaaatgacagcagtcttccagccatcaccggtgaagtt
ctgtgactataggcatgaactgccagactctggtgactcttgcacacctt
tgtgtaccccaagtgtcatctccctaaccctgaatcccagaatgaaacct
gggcctgaagacacactatgtagtttgggctttcatttctcttaacctcc
ttcaataaggcatgggccagctcttctcattgaaccccaaggctaacact
gatgctactgtttgact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_7063783_7064725
seq2: B6Ng01-022E10.b_30_971 (reverse)

seq1  TTTTACACACCTGGAA-GTGTGGTAGCC-TAGTTT-ACACCAACATGAGG  47
      |||||||||||||||| ||||||||||| |||||| ||||||||||||||
seq2  TTTTACACACCTGGAAGGTGTGGTAGCCATAGTTTAACACCAACATGAGG  50

seq1  GGTAGTTTTTAATTCCTTAAAAAAAAAAAAAAAAGGAAAACACTCTTTGA  97
      ||||| |||||  ||| |||||||||||||||| | ||||||||||||||
seq2  GGTAG-TTTTATATCCCTAAAAAAAAAAAAAAAGGAAAAACACTCTTTGA  99

seq1  AGTGTTTTCTGTTATTTCCACCAGGTGAGAATAAGACCACTACCACAATT  147
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGTGTTTTCTGTTATTTCC-CCAGGTGAGAATAAGACCACTACCACAATT  148

seq1  TTTTTGAGCCAAATTTGTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  197
      |||||||||||||||   ||||||| ||||||||||||||||||||||||
seq2  TTTTTGAGCCAAATT--GTTTTTCTATCTTTCTTTCTTTCTTTCTTTCTT  196

seq1  TCTTTCTTTCTTTCTTTC-AAGATTTTTTATTATTATACAGAAGTACACT  246
      |||||||||||||||||| ||||||||||| |||||||||||||||||||
seq2  TCTTTCTTTCTTTCTTTCAAAGATTTTTTA-TATTATACAGAAGTACACT  245

seq1  GCAGCTGTCTTCAGATGTGCCAGAAGAGGGCATCAGATCTCATTATGGGT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGTCTTCAGATGTGCCAGAAGAGGGCATCAGATCTCATTATGGGT  295

seq1  GGTTATGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGG  345

seq1  AGAGCAGTCAAGTGCTCCTATCTGCTGAGCCACCTCACCAGCCCTTGAGC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGTCAAGTGCTCCTATCTGCTGAGCCACCTCACCAGCCCTTGAGC  395

seq1  CAAAATTGAAGCATGCTTTATTAAATACTGGCCAGGATGATGGACACTGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTGAAGCATGCTTTATTAAATACTGGCCAGGATGATGGACACTGA  445

seq1  CTGGGTTCACACCTAGGATGCTTGAAGTATGACACCAAATTACATTAGTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTCACACCTAGGATGCTTGAAGTATGACACCAAATTACATTAGTC  495

seq1  AGAGGCTTATAAAGGTAAAATCCACAAAGACATGTACTTCCTGCTTCATC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCTTATAAAGGTAAAATCCACAAAGACATGTACTTCCTGCTTCATC  545

seq1  TAAGCAGGGCAAATGTACACCAGGCCATACTCTCCTGCCTATGTGTGACC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAGGGCAAATGTACACCAGGCCATACTCTCCTGCCTATGTGTGACC  595

seq1  AAGCAGATCCTGTGCAAGTTGGGGCAACCGACCTTGTTTACAAAAGTGAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGATCCTGTGCAAGTTGGGGCAACCGACCTTGTTTACAAAAGTGAA  645

seq1  AACGTGACAGTCCCTAGCATTCCAGAAAGTTATGTGTCCGTGGGCAAGTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTGACAGTCCCTAGCATTCCAGAAAGTTATGTGTCCGTGGGCAAGTG  695

seq1  GGGCTTAAAGGTGAGAGGCATTTTTGTTTTATAGGACTCAAGCACAGTAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTAAAGGTGAGAGGCATTTTTGTTTTATAGGACTCAAGCACAGTAA  745

seq1  TTGAAACTTAAATATAACTTTAGCCCACACAGACACTCAGCTGTTTTCAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACTTAAATATAACTTTAGCCCACACAGACACTCAGCTGTTTTCAG  795

seq1  GTCTCAGCACTACCTTACCTTGATTTGTCAAGGCAGCAGAAATGTTTAAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGCACTACCTTACCTTGATTTGTCAAGGCAGCAGAAATGTTTAAG  845

seq1  TCTTGACAGATCCAGGACATTGTGTGTAGGCAAACACCTTTAGTCCCAGC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGACAGATCCAGGACATTGTGTGTAGGCAAACACCTTTAGTCCCAGC  895

seq1  ACTGTAACAGCAGAAGTAGGCAGAGGCCAGTGTACCTAGTGAATTCC  943
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAACAGCAGAAGTAGGCAGAGGCCAGTGTACCTAGTGAATTCC  942

seq1: chr7_6933320_6933936
seq2: B6Ng01-022E10.g_69_685

seq1  GAATTCTTACTGTCTGCATCTCACAGCCACATGTTTTTTGTTGTTGTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACTGTCTGCATCTCACAGCCACATGTTTTTTGTTGTTGTTGT  50

seq1  CTGTCCTTCTGGTTTTGTTTGGGGTGGTTATCTTTTTCTCATTCATTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTTCTGGTTTTGTTTGGGGTGGTTATCTTTTTCTCATTCATTCAT  100

seq1  TGATTTATCGTGGATTTTTTTTTTTTACTTTATTTATTTATGTGGTATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTATCGTGGATTTTTTTTTTTTACTTTATTTATTTATGTGGTATGT  150

seq1  GTATGTATGCATGTAACAGCCTGATGGTAGAGGTCAGAGGACAACTGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTATGCATGTAACAGCCTGATGGTAGAGGTCAGAGGACAACTGGAG  200

seq1  GGAATCAGTTCTCCTTCCATCTTATGAGGGTTCGAGGTATTGAACTTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCAGTTCTCCTTCCATCTTATGAGGGTTCGAGGTATTGAACTTGGG  250

seq1  TGGTCAGGCTTAGTGACTTTAGCCATCTTGCCAGCCCAGTTGTTTTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAGGCTTAGTGACTTTAGCCATCTTGCCAGCCCAGTTGTTTTGTTT  300

seq1  CTTTTTTTGTTGTTGTTGTTGTTGTTTTAGAGACAGAGTCTCACATAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTGTTGTTGTTGTTGTTGTTTTAGAGACAGAGTCTCACATAGCT  350

seq1  CACTTTGGCTTTGAAATGACAGCAGTCTTCCAGCCATCACCGGTGAAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGGCTTTGAAATGACAGCAGTCTTCCAGCCATCACCGGTGAAGTT  400

seq1  CTGTGACTATAGGCATGAACTGCCAGACTCTGGTGACTCTTGCACACCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGACTATAGGCATGAACTGCCAGACTCTGGTGACTCTTGCACACCTT  450

seq1  TGTGTACCCCAAGTGTCATCTCCCTAACCCTGAATCCCAGAATGAAACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACCCCAAGTGTCATCTCCCTAACCCTGAATCCCAGAATGAAACCT  500

seq1  GGGCCTGAAGACACACTATGTAGTTTGGGCTTTCATTTCTCTTAACCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTGAAGACACACTATGTAGTTTGGGCTTTCATTTCTCTTAACCTCC  550

seq1  TTCAGTAAGGCATGGGCCAGCTCTTCTCATTGAACCCCAAGGCTAACACT  600
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATAAGGCATGGGCCAGCTCTTCTCATTGAACCCCAAGGCTAACACT  600

seq1  GATGCTACTGTTTGACT  617
      |||||||||||||||||
seq2  GATGCTACTGTTTGACT  617