BAC Information

Click to search

BAC

Clone NameB6Ng01-022F07
Chromosome7 (Build37)
Map Location 94,407,604 - 94,408,686
singlet/doubletsinglet
Overlap geneNox4
Upstream geneOlfr310, Olfr309, Olfr308, Olfr307, Olfr306-ps1, Olfr305, Olfr304, Olfr303, Olfr301, Olfr1531-ps1, Olfr300-ps1, Olfr299, Olfr298, Olfr297, Olfr296-ps1, Olfr295, Olfr294, Olfr293, Olfr292, Folh1, EG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477
Downstream geneTyr, Grm5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022F07.bB6Ng01-022F07.g
ACCDH854581DH854582
length1,073871
definitionDH854581|Mus musculus domesticus DNA, BAC clone: B6Ng01-022F07, 5' end.DH854582|Mus musculus domesticus DNA, BAC clone: B6Ng01-022F07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatggcatagagaagggaggaatttgctgagcatccagcacatt
acctgtagggaagattggtttgtccttttttccattattatagcacttac
aggatgcttagtaaatagatattcaaagatgatgctgtatattagctact
tatttggaacattttaatctgagtcatttggttgacctctgcttcttcct
tgcttcttgagagaagagaaatatatgttgttgttgtcgtcgctgtcaca
aagtttgtaggaactttgctgattgttaagtagaatttctgtttgtggaa
gaagacttttatcattacgaaatcattaagaatgactgttattaatatta
actgaatcttgggtttttaaacaagagaaatactgtctattttatgagat
tgttctgattctttaaaagaagttaaaataaaagagaaatcgtcattgaa
gcctcctcgtgtgcttgacatttgcctatattgctactatattttttcca
cagtagcgaatattcttcaaggtaaatcctattcataaggggacactaag
gaatagaatttaaaaacgaaacccattgtgttattttaccaagtgtgaaa
atgtaatttccttctttcctttcctgtattctcttcctttacaaccatat
atagtaattcatattactatttgatatccaggaaaacacaaatatgttct
agccatatccgggatacactgagaattaagatatgaaagtcaagtgtttt
gggaacggaaaatactacagatgtgaaagatgttttatccagtttgtgtc
tctcagcatccaacaaattctaatgtattgccatggtgctgtgccataat
tcccttgaagaaacatttgcagaaagacataagagtaggggtatctttcc
tgatgaaaaaaaaaaagtactaactttcaatgtcaacacaccttcatttg
cagatgtgactactgaagtgtgatttaaaggtctggtgacatgtctacta
taaccgctggtttagtagccagtacttgataggaaacattcagcacctta
cccacttcctttataggtttcta
gaattcactctgcagactagcttgtccttgtactcatagagatccacctg
actctgcctcctgagtgctggaattaagcatcccaattgatggcaaggat
cacaattctcagctcattctttttttttttttcttttacttttgtattgt
caagtgtttttcaaagtaatgttctgatttcaaaggattttaaaaaaatc
taaaataaaacctcaaatggaaaaagattaaattatcattaaaagtcagc
aatttccttctgttttagttactgctgttacgtctcagccttgagtttct
gccctgactttctttgacaacatagtctgatgtggaatagtaaactgaaa
taaatctttttgtccccaaatcattttttattatgctttttcattacaac
aacagaaagcccttctaaaccataaattagtatcagtaatgggctatttc
tgtgatagacctgagctgttctggagttgaagctattgtggaaggtgtgg
aactttgtgatagaaaactatgctgagctattttgggaatttagaagatg
ctagagatagtgcagataatggtgacttgccctgaagtttaagagggagt
tgagaatttcttaaagactctctctgtgatgctcaataagttagactaag
aatatacacttctgctcaccagaagataaagaattggccttaattaagaa
gagaccaacattactgaaaagaaaacttctggttggtgatgaaaaaagcc
tccattttcagagaagtggatctgcctaagccctttgaggtccagaaaat
catgagtcaagaaagcatgacacagagcttttacactttttcaattttag
tttttgctttatttgaattgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_94407604_94408686
seq2: B6Ng01-022F07.b_46_1118

seq1  GAATTCAATGGCATAGAGAAGGGAGGAATTTGCTGAGCATCCAGCACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGGCATAGAGAAGGGAGGAATTTGCTGAGCATCCAGCACATT  50

seq1  ACCTGTAGGGAAGATTGGTTTGTCCTTTTTTCCATTATTATAGCACTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTAGGGAAGATTGGTTTGTCCTTTTTTCCATTATTATAGCACTTAC  100

seq1  AGGATGCTTAGTAAATAGATATTCAAAGATGATGCTGTATATTAGCTACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGCTTAGTAAATAGATATTCAAAGATGATGCTGTATATTAGCTACT  150

seq1  TATTTGGAACATTTTAATCTGAGTCATTTGGTTGACCTCTGCTTCTTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGAACATTTTAATCTGAGTCATTTGGTTGACCTCTGCTTCTTCCT  200

seq1  TGCTTCTTGAGAGAAGAGAAATATATGTTGTTGTTGTCGTCGCTGTCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTTGAGAGAAGAGAAATATATGTTGTTGTTGTCGTCGCTGTCACA  250

seq1  AAGTTTGTAGGAACTTTGCTGATTGTTAAGTAGAATTTCTGTTTGTGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGTAGGAACTTTGCTGATTGTTAAGTAGAATTTCTGTTTGTGGAA  300

seq1  GAAGACTTTTATCATTACGAAATCATTAAGAATGACTGTTATTAATATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACTTTTATCATTACGAAATCATTAAGAATGACTGTTATTAATATTA  350

seq1  ACTGAATCTTGGGTTTTTAAACAAGAGAAATACTGTCTATTTTATGAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATCTTGGGTTTTTAAACAAGAGAAATACTGTCTATTTTATGAGAT  400

seq1  TGTTCTGATTCTTTAAAAGAAGTTAAAATAAAAGAGAAATCGTCATTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGATTCTTTAAAAGAAGTTAAAATAAAAGAGAAATCGTCATTGAA  450

seq1  GCCTCCTCGTGTGCTTGACATTTGCCTATATTGCTACTATATTTTTTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCTCGTGTGCTTGACATTTGCCTATATTGCTACTATATTTTTTCCA  500

seq1  CAGTAGCGAATATTCTTCAAGGTAAATCCTATTCATAAGGGGACACTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGCGAATATTCTTCAAGGTAAATCCTATTCATAAGGGGACACTAAG  550

seq1  GAATAGAATTTAAAAACGAAACCCATTGTGTTATTTTACCAAGTGTGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGAATTTAAAAACGAAACCCATTGTGTTATTTTACCAAGTGTGAAA  600

seq1  ATGTAATTTCCTTCTTTCCTTTCCTGTATTCTCTTCCTTTACAACCATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATTTCCTTCTTTCCTTTCCTGTATTCTCTTCCTTTACAACCATAT  650

seq1  ATAGTAATTCATATTACTATTTGATATCCAGGAAAACACAAATATGTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAATTCATATTACTATTTGATATCCAGGAAAACACAAATATGTTCT  700

seq1  AGCCATATCCGGGATACACTGAGAATTAAGATATGAAAGTCAAGTGTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATATCCGGGATACACTGAGAATTAAGATATGAAAGTCAAGTGTTTT  750

seq1  GGGAACGGAAAATACTACAGATGTGAAAGATGTTTTATCCAGTTTGTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACGGAAAATACTACAGATGTGAAAGATGTTTTATCCAGTTTGTGTC  800

seq1  TCTCAGCATCCAACAAATTCTAATGTATTGCCATGGTGCTGTGCCATAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCATCCAACAAATTCTAATGTATTGCCATGGTGCTGTGCCATAAT  850

seq1  TCCCTTGAAGAAACATTTGCAGAAAGACATAAGAGTAGGGGTATCCTTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TCCCTTGAAGAAACATTTGCAGAAAGACATAAGAGTAGGGGTATCTTTCC  900

seq1  TGATTGAAAAAAAAAAAAGTACTTAACTTTCAATGTCAAACACACCTTCC  950
      ||||   ||||||||||||||| |||||||||||||| |||||||||| |
seq2  TGAT--GAAAAAAAAAAAGTAC-TAACTTTCAATGTC-AACACACCTT-C  945

seq1  ATTTGCAGATGTGACTACTGAAGTGTGATTTAAAATGTCT-GTGACATGT  999
      ||||||||||||||||||||||||||||||| ||| |||| |||||||||
seq2  ATTTGCAGATGTGACTACTGAAGTGTGATTT-AAAGGTCTGGTGACATGT  994

seq1  CTACATAATAACGCTTGTTTAGTAGCAAGTTACTTGAATAGGAAACATTC  1049
      |||| ||  | |||| |||||||||| || |||||| |||||||||||||
seq2  CTAC-TATAACCGCTGGTTTAGTAGCCAG-TACTTG-ATAGGAAACATTC  1041

seq1  AACACCTTAACCCTACTCGCTTTATAGTTTTCTA  1083
      | |||||||  || |||  |||||||| ||||||
seq2  AGCACCTTA--CCCACTTCCTTTATAGGTTTCTA  1073