BAC Information

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BAC

Clone NameB6Ng01-022F22
Chromosome7 (Build37)
Map Location 64,546,815 - 64,584,723
singlet/doubletdoublet
Overlap geneGabrg3
Upstream genep, LOC100040839
Downstream geneGabra5, Gabrb3, EG668807, LOC434189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022F22.bB6Ng01-022F22.g
ACCDH854611DH854612
length761202
definitionDH854611|Mus musculus domesticus DNA, BAC clone: B6Ng01-022F22, 5' end.DH854612|Mus musculus domesticus DNA, BAC clone: B6Ng01-022F22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,583,963 - 64,584,723)(64,546,815 - 64,547,016)
sequence
gaattctgagcttgcactgcctccagcatacactgcctgacagcaaacca
tgctatggtatgtatctatggtttgcaacaatttggttgtttttgttgtt
gttactgctgcaggtatggggtttgtttgtttgtttgtttgttttgaact
gttgagattgactccagggcctgatgcacctgtcatcatgatgtgttcct
aatccctaaatgtgtggacttttgaagattttagaaaccatcttgaacca
ttatgcttttccttggaaaaagccaagcaatgctctccagtcagcttgta
atctttttcatgagggaagaccacagatgctcttgttttatagtggtatt
tcttgacttaataaataagattgatggctcctattaggccccaggctgaa
aaaggaagagctaaatgtaggaaaattaaagacatttattaatatttaaa
tgccatctaccttctgtccccactggttacaactgtagatctagccatct
gtggattgatctggactacagaggaaaacttattttttttttaggtattt
tcctcatttacatttccaatgctatcccaaaagttccccataccctcccc
ccccactcccctacccacccactcccactttttggccctggtgttcccct
gtactggggcatataaagtttgcatgaccaatgggcctctttttccagta
gtggccgactaggccatcttttggtacaaatgcagctagagacaagagct
ccggggtactg
aacaaagagagcagtgcacagcttcaatggtagatctgagtattattggt
ctaaattctcaatcaaaagaaccaggataggaaactggaggagaagaaga
agaaagaggaagaggaggcagaggaagaggaggaggaagaagaggaggag
gaagaggagaaggaggacaaaaaggagaagttagaggaggagaaggaggg
ag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_64583963_64584723
seq2: B6Ng01-022F22.b_43_803 (reverse)

seq1  CAGTACCCCGGAGCTCTTGTCTCTAGCTGCATTTGTACCAAAAGATGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACCCCGGAGCTCTTGTCTCTAGCTGCATTTGTACCAAAAGATGGCC  50

seq1  TAGTCGGCCACTACTGGAAAAAGAGGCCCATTGGTCATGCAAACTTTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCGGCCACTACTGGAAAAAGAGGCCCATTGGTCATGCAAACTTTATA  100

seq1  TGCCCCAGTACAGGGGAACACCAGGGCCAAAAAGTGGGAGTGGGTGGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCAGTACAGGGGAACACCAGGGCCAAAAAGTGGGAGTGGGTGGGTA  150

seq1  GGGGAGTGGGGGGGGAGGGTATGGGGAACTTTTGGGATAGCATTGGAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGTGGGGGGGGAGGGTATGGGGAACTTTTGGGATAGCATTGGAAAT  200

seq1  GTAAATGAGGAAAATACCTAAAAAAAAAATAAGTTTTCCTCTGTAGTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGAGGAAAATACCTAAAAAAAAAATAAGTTTTCCTCTGTAGTCCA  250

seq1  GATCAATCCACAGATGGCTAGATCTACAGTTGTAACCAGTGGGGACAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAATCCACAGATGGCTAGATCTACAGTTGTAACCAGTGGGGACAGAA  300

seq1  GGTAGATGGCATTTAAATATTAATAAATGTCTTTAATTTTCCTACATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGATGGCATTTAAATATTAATAAATGTCTTTAATTTTCCTACATTTA  350

seq1  GCTCTTCCTTTTTCAGCCTGGGGCCTAATAGGAGCCATCAATCTTATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCCTTTTTCAGCCTGGGGCCTAATAGGAGCCATCAATCTTATTTA  400

seq1  TTAAGTCAAGAAATACCACTATAAAACAAGAGCATCTGTGGTCTTCCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTCAAGAAATACCACTATAAAACAAGAGCATCTGTGGTCTTCCCTC  450

seq1  ATGAAAAAGATTACAAGCTGACTGGAGAGCATTGCTTGGCTTTTTCCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAAGATTACAAGCTGACTGGAGAGCATTGCTTGGCTTTTTCCAAG  500

seq1  GAAAAGCATAATGGTTCAAGATGGTTTCTAAAATCTTCAAAAGTCCACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCATAATGGTTCAAGATGGTTTCTAAAATCTTCAAAAGTCCACAC  550

seq1  ATTTAGGGATTAGGAACACATCATGATGACAGGTGCATCAGGCCCTGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGGGATTAGGAACACATCATGATGACAGGTGCATCAGGCCCTGGAG  600

seq1  TCAATCTCAACAGTTCAAAACAAACAAACAAACAAACAAACCCCATACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCTCAACAGTTCAAAACAAACAAACAAACAAACAAACCCCATACCT  650

seq1  GCAGCAGTAACAACAACAAAAACAACCAAATTGTTGCAAACCATAGATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGTAACAACAACAAAAACAACCAAATTGTTGCAAACCATAGATAC  700

seq1  ATACCATAGCATGGTTTGCTGTCAGGCAGTGTATGCTGGAGGCAGTGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCATAGCATGGTTTGCTGTCAGGCAGTGTATGCTGGAGGCAGTGCAA  750

seq1  GCTCAGAATTC  761
      |||||||||||
seq2  GCTCAGAATTC  761

seq1: chr7_64546815_64547016
seq2: B6Ng01-022F22.g_71_272

seq1  AACAAAGAGAGCAGTGCACAGCTTCAATGGTAGATCTGAGTATTATTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGAGAGCAGTGCACAGCTTCAATGGTAGATCTGAGTATTATTGGT  50

seq1  CTAAATTCTCAATCAAAAGAACCAGGATAGGAAACTGGAGGAGAAGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATTCTCAATCAAAAGAACCAGGATAGGAAACTGGAGGAGAAGAAGA  100

seq1  AGAAAGAGGAAGAGGAGGCAGAGGAAGAGGAGGAGGAAGAAGAGGAGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAGGAAGAGGAGGCAGAGGAAGAGGAGGAGGAAGAAGAGGAGGAG  150

seq1  GAAGAGGAGAAGGAGGACAAAAAGGAGAAGTTAGAGGAGGAGAAGGAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGAGAAGGAGGACAAAAAGGAGAAGTTAGAGGAGGAGAAGGAGGG  200

seq1  AG  202
      ||
seq2  AG  202