BAC Information

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BAC

Clone NameB6Ng01-022G04
Chromosome7 (Build37)
Map Location 88,970,471 - 89,060,896
singlet/doubletdoublet
Overlap geneBtbd1, Tm6sf1, LOC100043161, Hdgfrp3
Upstream geneLOC100042402, Zscan2, Wdr73, Nmb, Sec11a, Zfp592, Alpk3, Slc28a1, EG623286, LOC100043130, Pde8a, EG636544, Rps17, Cpeb1, LOC623355, Ap3b2, BC048679, Fsd2, Whdc1, Homer2, 2610204K14Rik, 3110040N11Rik
Downstream geneBnc1, Sh3gl3, Adamtsl3, 1700129I04Rik, Eftud1, LOC100038986, LOC619808, Rkhd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022G04.bB6Ng01-022G04.g
ACCDH854623DH854624
length1,095807
definitionDH854623|Mus musculus domesticus DNA, BAC clone: B6Ng01-022G04, 5' end.DH854624|Mus musculus domesticus DNA, BAC clone: B6Ng01-022G04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(88,970,471 - 88,971,572)(89,060,090 - 89,060,896)
sequence
gaattctccagtgtggtcggaaactgagacatcagccccaaagaggggca
cccaaaggacaacctgaaatcaaggccagaacagaagcccctccctgccc
tcaaggaatcctgagtgagagtgcatgcattagtgtgattagtgatatcc
agggatatcaacagcttacacctgttatcataccatcaggaattcacttt
acccaaccctcagtaccatttaacagctaaccatgttctatagctgtcaa
agttttccactctcatttcccaaattctctctttgacttgcctctcagga
tgcccggctgccttcctttctcatctctctgacagccgcctagtttgctt
atcgctccctttcccttcctccagctctatgcaggcccttgcaggtctca
ggcaccctgtacctttcacagtccactactttcccacgttaacgctgttc
taacttcctgcagctccttggcatctcctatctaaatagagcacaacaaa
acctcttaatgtatatgttacttggaggttccagttcctccagcaacagg
caggtgaggattgtaaatgcgaatagggtctcatcactccactgaaaacc
ctgttttctctcaagccttcttcctcagtcccccaaatccctgcccggcc
tatctctttaatcactatcacccatcgctttctttttatctactcaaacc
tcgatagtttactcttgtagtttctctggcagaagagattaaggcctaaa
acacgcccccacccccttaaaaagttttctctggtattatttccttccaa
accctgtcagcctggacagtgtccactgccgactcctacactgagaaata
agctacgcagggagacacagtgtacgtcaaatgaactagaacaccatttg
taagtgagagggctttaagtaagcagattattaaagtgtaaacctaagtt
cagaagcctcgacgtaatggtagttatttagggtgtaaaaacagtaaaat
ctgcctcagccacctcacttttccaggttagcagctccacattgtggtcc
cacatggtttaaagatattcaatgcctaagtaaaaatagtctaga
gaattcaaaaaaagaaaatgtctccaaaggcattggtcttgggaacgctg
tgtactaaggaaataacaaatgtagggttaagatatggcagagaatgaag
ggggaaagacaattctgtacagaagtgaaaaaacatgcataggaggcagt
ttgctgaagggcaaattgtaatgttataatggccaataaagctatgaaca
gatgtttaaccttccccatcaatcaaaacatgcaaatttaaaaaaagtaa
cacccaaatgctatcaaagatggaaaaggaggccatttttatactttggt
ggagatgtgacttactacagccctattgaaaacaattttatctatgaccc
agcaaagtcctagcaatttatttcattgagattgttacataagtgtagga
taaaaggccctgaaaagcaaggtacatgtccatctcttaaggaaaggtga
gtgtatagcttctataatcattctattattattcatttaaaaagttaatt
ggtctatgctaattttaagaattttcataatgaagagcattttataaaat
gaaattcctctgtttgtttgtgtatgagaactgtcacaggcaccactctt
ccctccaccctgcccccaaaccagcccagcgctgtctaaaacatttgcta
gggttatgtgtatggaaatggagaagagcatactttgttataaatagtat
ttacctgggagtgagcaaatctaagagaagataggaaagtaagcctgtct
caacaaagaagaagggactccatgatcaaacatgtcccatttatgtagta
tagatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_88970471_88971572
seq2: B6Ng01-022G04.b_49_1143

seq1  GAATTCTCCAGTGTGGTCGGAAACTGAGACATCAGCCCCAAAGAGGGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAGTGTGGTCGGAAACTGAGACATCAGCCCCAAAGAGGGGCA  50

seq1  CCCAAAGGACAACCTGAAATCAAGGCCAGAACAGAAGCCCCTCCCTGCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAGGACAACCTGAAATCAAGGCCAGAACAGAAGCCCCTCCCTGCCC  100

seq1  TCAAGGAATCCTGAGTGAGAGTGCATGCATTAGTGTGATTAGTGATATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGAATCCTGAGTGAGAGTGCATGCATTAGTGTGATTAGTGATATCC  150

seq1  AGGGATATCAACAGCTTACACCTGTTATCATACCATCAGGAATTCACTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATATCAACAGCTTACACCTGTTATCATACCATCAGGAATTCACTTT  200

seq1  ACCCAACCCTCAGTACCATTTAACAGCTAACCATGTTCTATAGCTGTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAACCCTCAGTACCATTTAACAGCTAACCATGTTCTATAGCTGTCAA  250

seq1  AGTTTTCCACTCTCATTTCCCAAATTCTCTCTTTGACTTGCCTCTCAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCCACTCTCATTTCCCAAATTCTCTCTTTGACTTGCCTCTCAGGA  300

seq1  TGCCCGGCTGCCTTCCTTTCTCATCTCTCTGACAGCCGCCTAGTTTGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCGGCTGCCTTCCTTTCTCATCTCTCTGACAGCCGCCTAGTTTGCTT  350

seq1  ATCGCTCCCTTTCCCTTCCTCCAGCTCTATGCAGGCCCTTGCAGGTCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGCTCCCTTTCCCTTCCTCCAGCTCTATGCAGGCCCTTGCAGGTCTCA  400

seq1  GGCACCCTGTACCTTTCACAGTCCACTACTTTCCCACGTTAACGCTGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCCTGTACCTTTCACAGTCCACTACTTTCCCACGTTAACGCTGTTC  450

seq1  TAACTTCCTGCAGCTCCTTGGCATCTCCTATCTAAATAGAGCACAACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCCTGCAGCTCCTTGGCATCTCCTATCTAAATAGAGCACAACAAA  500

seq1  ACCTCTTAATGTATATGTTACTTGGAGGTTCCAGTTCCTCCAGCAACAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTTAATGTATATGTTACTTGGAGGTTCCAGTTCCTCCAGCAACAGG  550

seq1  CAGGTGAGGATTGTAAATGCGAATAGGGTCTCATCACTCCACTGAAAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGAGGATTGTAAATGCGAATAGGGTCTCATCACTCCACTGAAAACC  600

seq1  CTGTTTTCTCTCAAGCCTTCTTCCTCAGTCCCCCAAATCCCTGCCCGGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTCTCTCAAGCCTTCTTCCTCAGTCCCCCAAATCCCTGCCCGGCC  650

seq1  TATCTCTTTAATCACTATCACCCATCGCTTTCTTTTTATCTACTCAAACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTTTAATCACTATCACCCATCGCTTTCTTTTTATCTACTCAAACC  700

seq1  TCGATAGTTTACTCTTGTAGTTTCTCTGGCAGAAGAGATTAAGGCCTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATAGTTTACTCTTGTAGTTTCTCTGGCAGAAGAGATTAAGGCCTAAA  750

seq1  ACACGCCCCCACCCCCTTAAAAAGTTTTCTCTGGTATTATTTCCTTCCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGCCCCCACCCCCTTAAAAAGTTTTCTCTGGTATTATTTCCTTCCAA  800

seq1  ACCCTGTCAGCCTGGACAGTGTCCACTGCCGACTCCTACACTGAGAAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTCAGCCTGGACAGTGTCCACTGCCGACTCCTACACTGAGAAATA  850

seq1  AGCTACGCAGGGAGACACAGTGTACGTCAAATGAACTAGAACACCATTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACGCAGGGAGACACAGTGTACGTCAAATGAACTAGAACACCATTTG  900

seq1  TAAGTGAGAGGGCTTTAAGTAAGCAGATTATTAAAGTGTAAAACCTAAGT  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TAAGTGAGAGGGCTTTAAGTAAGCAGATTATTAAAGTGT-AAACCTAAGT  949

seq1  TCAGAAGCCTCGACGTAATGGTAGTTAATTTAGGTTGTAAAAACAGTAAA  1000
      |||||||||||||||||||||||||| ||||||| |||||||||||| ||
seq2  TCAGAAGCCTCGACGTAATGGTAGTT-ATTTAGGGTGTAAAAACAGT-AA  997

seq1  AATCTGCCTCAGCCACCTCACTTTTCCAGTTTAGCAAGCTCCACCATTGT  1050
      ||||||||||||||||||||||||||||| ||||| ||||||| ||||||
seq2  AATCTGCCTCAGCCACCTCACTTTTCCAGGTTAGC-AGCTCCA-CATTGT  1045

seq1  TGTCACACAATGTTTTAAAGATAATCAATGCCTAAGTAAAAATTAGTCTA  1100
       ||| ||| ||| |||||||||| |||||||||||||||||| |||||||
seq2  GGTCCCAC-ATGGTTTAAAGATATTCAATGCCTAAGTAAAAA-TAGTCTA  1093

seq1  GA  1102
      ||
seq2  GA  1095

seq1: chr7_89060090_89060896
seq2: B6Ng01-022G04.g_65_871 (reverse)

seq1  GCATCTATACTACATAAATGGGACATGTTTGATCATGGAGTCCCTTCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTATACTACATAAATGGGACATGTTTGATCATGGAGTCCCTTCTTC  50

seq1  TTTGTTGAGACAGGCTTACTTTCCTATCTTCTCTTAGATTTGCTCACTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGAGACAGGCTTACTTTCCTATCTTCTCTTAGATTTGCTCACTCC  100

seq1  CAGGTAAATACTATTTATAACAAAGTATGCTCTTCTCCATTTCCATACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAAATACTATTTATAACAAAGTATGCTCTTCTCCATTTCCATACAC  150

seq1  ATAACCCTAGCAAATGTTTTAGACAGCGCTGGGCTGGTTTGGGGGCAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCCTAGCAAATGTTTTAGACAGCGCTGGGCTGGTTTGGGGGCAGGG  200

seq1  TGGAGGGAAGAGTGGTGCCTGTGACAGTTCTCATACACAAACAAACAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGGAAGAGTGGTGCCTGTGACAGTTCTCATACACAAACAAACAGAG  250

seq1  GAATTTCATTTTATAAAATGCTCTTCATTATGAAAATTCTTAAAATTAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTCATTTTATAAAATGCTCTTCATTATGAAAATTCTTAAAATTAGC  300

seq1  ATAGACCAATTAACTTTTTAAATGAATAATAATAGAATGATTATAGAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACCAATTAACTTTTTAAATGAATAATAATAGAATGATTATAGAAGC  350

seq1  TATACACTCACCTTTCCTTAAGAGATGGACATGTACCTTGCTTTTCAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACACTCACCTTTCCTTAAGAGATGGACATGTACCTTGCTTTTCAGGG  400

seq1  CCTTTTATCCTACACTTATGTAACAATCTCAATGAAATAAATTGCTAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTATCCTACACTTATGTAACAATCTCAATGAAATAAATTGCTAGGA  450

seq1  CTTTGCTGGGTCATAGATAAAATTGTTTTCAATAGGGCTGTAGTAAGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTGGGTCATAGATAAAATTGTTTTCAATAGGGCTGTAGTAAGTCA  500

seq1  CATCTCCACCAAAGTATAAAAATGGCCTCCTTTTCCATCTTTGATAGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCCACCAAAGTATAAAAATGGCCTCCTTTTCCATCTTTGATAGCAT  550

seq1  TTGGGTGTTACTTTTTTTAAATTTGCATGTTTTGATTGATGGGGAAGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTGTTACTTTTTTTAAATTTGCATGTTTTGATTGATGGGGAAGGTT  600

seq1  AAACATCTGTTCATAGCTTTATTGGCCATTATAACATTACAATTTGCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCTGTTCATAGCTTTATTGGCCATTATAACATTACAATTTGCCCT  650

seq1  TCAGCAAACTGCCTCCTATGCATGTTTTTTCACTTCTGTACAGAATTGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAAACTGCCTCCTATGCATGTTTTTTCACTTCTGTACAGAATTGTC  700

seq1  TTTCCCCCTTCATTCTCTGCCATATCTTAACCCTACATTTGTTATTTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCCTTCATTCTCTGCCATATCTTAACCCTACATTTGTTATTTCCT  750

seq1  TAGTACACAGCGTTCCCAAGACCAATGCCTTTGGAGACATTTTCTTTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACACAGCGTTCCCAAGACCAATGCCTTTGGAGACATTTTCTTTTTT  800

seq1  TGAATTC  807
      |||||||
seq2  TGAATTC  807