BAC Information

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BAC

Clone NameB6Ng01-024L04
Chromosome7 (Build37)
Map Location 135,785,846 - 135,945,321
singlet/doubletdoublet
Overlap geneInpp5f, LOC100043651, 1110007A13Rik, Sec23ip
Upstream geneBcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781, Rgs10, LOC100043643, Tial1, Bag3, EG639030
Downstream geneLOC210714, LOC100043144, Ppapdc1a, Brwd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024L04.bB6Ng01-024L04.g
ACCDH856252DH856253
length6371,155
definitionDH856252|Mus musculus domesticus DNA, BAC clone: B6Ng01-024L04, 5' end.DH856253|Mus musculus domesticus DNA, BAC clone: B6Ng01-024L04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(135,785,846 - 135,786,482)(135,944,161 - 135,945,321)
sequence
gaattcattttaatgtgattcctctttagagattgtctccaaatatggtt
acattctaaggtgaagacttcaacagaagagatggctcagccctcggcag
gaacctaatgttcgtagaagcacttactgtaaagcattgcagggaatcct
ctccagtcccaattacctctgttgcatggtgacgtttttcaaatgtgttt
gactaagcagtgaggaggtagactagacctgaaagatcacatgatgacct
tgagtccaggctctgcatgaacctcaagtaccagatggccatgcctccaa
aacagtcggacaggctgagttcttgatctagtaatcaccaagaatgactg
atctcactttcttctttcttttttccttcctctgtcttttctttcagttg
tttgttttcgttcttactatgtttttccactgacctggaactgtcattca
agacggtgttgagcttgtaatcctgctccctcctcttgcatgctgggatt
gtgtagacactgctgctgtgcttctttgcttggctttcttttgtttttcc
tttaaagaaccgaagaggcagcctactacagaaccacctaacttctatgt
acatagggttttttggggggggtgtaaaggtataatt
gaattcttttattaagtcccctaaatttgggctctggtttttaattggag
ttgcattgaatttatagactaattaggtgagcctcaacagggttataatt
gtgtcttcccacccactgctcttcatttatttacatcttattttatatcc
tttcagtgggtttcaaatttttcttcataaatgtcttgaggctttttatt
atgttaattcctagaaaacatacagatctgtcaggtctgggtattttcat
ggttttaactggtagtttatttttatgaacgttttataatgagttatttc
taggctaaaggggatcactagtattggtcttttcaccccctaatcttgct
gaacttttagttctcttattaatggtaatgccttgcctgctctcttcttc
gctttaccatgtaaattctcatacagtctaaatagcatgacagtgttgcc
tcggccctatattacttatggtatagattcagctatatgtacaagagaca
caaataactatggctccaagaagacataaattcaacaaggcatggtagtg
cacacctgtattcccagaatgtggaaggctggggcagaagggtcaaaaac
tagaagccggcctgggcaagactatcaaaaaatgacaagcttttattttg
tttctgtgtaaaagtctgagtgtaggagacttgggatggttccatagtcc
tgcagccattaggctaccggctagaccaccgctctccgatgttgtcccac
catcaagtttgaaaacatagtctcttcatacctccgtgttccctgcagca
aggcatagggcagatgtaggaagttacacacaaattcttacttccgctgg
gcgtggtgacgcatgccttaatcccagcactcgggaagcagaggcaggcg
gagttctgagttcgaggccagcctggtctacaaagtgagtttcaggacag
ccagggctatacagagataccctgtctcaaaaaaaagaaaagaaaagaaa
aaagaaaagaaaaattcttactttccacccaccagcccaaattctagctt
tagattctgaaaatccactactttgctcttccatgactgctgcttatcat
gactttttcaaaccctcggagtttttttctttcctagattatttgatgga
aggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_135785846_135786482
seq2: B6Ng01-024L04.b_42_678

seq1  GAATTCATTTTAATGTGATTCCTCTTTAGAGATTGTCTCCAAATATGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTAATGTGATTCCTCTTTAGAGATTGTCTCCAAATATGGTT  50

seq1  ACATTCTAAGGTGAAGACTTCAACAGAAGAGATGGCTCAGCCCTCGGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTAAGGTGAAGACTTCAACAGAAGAGATGGCTCAGCCCTCGGCAG  100

seq1  GAACCTAATGTTCGTAGAAGCACTTACTGTAAAGCATTGCAGGGAATCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTAATGTTCGTAGAAGCACTTACTGTAAAGCATTGCAGGGAATCCT  150

seq1  CTCCAGTCCCAATTACCTCTGTTGCATGGTGACGTTTTTCAAATGTGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTCCCAATTACCTCTGTTGCATGGTGACGTTTTTCAAATGTGTTT  200

seq1  GACTAAGCAGTGAGGAGGTAGACTAGACCTGAAAGATCACATGATGACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAGCAGTGAGGAGGTAGACTAGACCTGAAAGATCACATGATGACCT  250

seq1  TGAGTCCAGGCTCTGCATGAACCTCAAGTACCAGATGGCCATGCCTCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCCAGGCTCTGCATGAACCTCAAGTACCAGATGGCCATGCCTCCAA  300

seq1  AACAGTCGGACAGGCTGAGTTCTTGATCTAGTAATCACCAAGAATGACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTCGGACAGGCTGAGTTCTTGATCTAGTAATCACCAAGAATGACTG  350

seq1  ATCTCACTTTCTTCTTTCTTTTTTCCTTCCTCTGTCTTTTCTTTCAGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCACTTTCTTCTTTCTTTTTTCCTTCCTCTGTCTTTTCTTTCAGTTG  400

seq1  TTTGTTTTCGTTCTTACTATGTTTTTCCACTGACCTGGAACTGTCATTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTCGTTCTTACTATGTTTTTCCACTGACCTGGAACTGTCATTCA  450

seq1  AGACGGTGTTGAGCTTGTAATCCTGCTCCCTCCTCTTGCATGCTGGGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGGTGTTGAGCTTGTAATCCTGCTCCCTCCTCTTGCATGCTGGGATT  500

seq1  GTGTAGACACTGCTGCTGTGCTTCTTTGCTTGGCTTTCTTTTGTTTTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGACACTGCTGCTGTGCTTCTTTGCTTGGCTTTCTTTTGTTTTTCC  550

seq1  TTTAAAGAACCGAAGAGGCAGCCTACTACAGAACCACCTAACTTCTATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGAACCGAAGAGGCAGCCTACTACAGAACCACCTAACTTCTATGT  600

seq1  ACATAGGGTTTTTTGGGGGGGGTGTAAAGGTATAATT  637
      |||||||||||||||||||||||||||||||||||||
seq2  ACATAGGGTTTTTTGGGGGGGGTGTAAAGGTATAATT  637

seq1: chr7_135944161_135945321
seq2: B6Ng01-024L04.g_68_1222 (reverse)

seq1  GGCCTTCAATTCAAATAA-CTAGGAAAG-AAAAAACTCTGGAGGTTTGGA  48
      ||||||| | |||||||| ||||||||| |||||||||  |||| || ||
seq2  GGCCTTCCA-TCAAATAATCTAGGAAAGAAAAAAACTC-CGAGGGTTTGA  48

seq1  AAAAGTCATGATAAGCAGGCAGTCATGGAAGAGCAAAGTAAGTGGATTTT  98
      ||||||||||||||||| ||||||||||||||||||||| ||||||||||
seq2  AAAAGTCATGATAAGCA-GCAGTCATGGAAGAGCAAAGT-AGTGGATTTT  96

seq1  CAGAATCTAAAGCTAG-ATTTTGGCTGGTGGGTTGGAAGTAAGAATTTTT  147
      |||||||||||||||| |||| ||||||||||| | |||||||||  |||
seq2  CAGAATCTAAAGCTAGAATTTGGGCTGGTGGGTGGAAAGTAAGAA--TTT  144

seq1  TTCTTTTTCTTTTTTTTCTTTTCTTTTCTTTTTTTTTGAGACAGGGTTTC  197
      ||||||   | ||||||||||||||||| |||||||||||||||||| ||
seq2  TTCTTT---TCTTTTTTCTTTTCTTTTC-TTTTTTTTGAGACAGGGTATC  190

seq1  TCTGTATAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCC  247
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TCTGTATAGCCCTGGCTGTCCTGAAACTCACTTTGTAGACCAGGCTGGCC  240

seq1  TCGAACTCAGAACTCCGCCTGCCTCTGCCTTCCGAGTGCTGGGATTAAGG  297
      |||||||||||||||||||||||||||| | |||||||||||||||||||
seq2  TCGAACTCAGAACTCCGCCTGCCTCTGCTTCCCGAGTGCTGGGATTAAGG  290

seq1  CATGCGTCACCACGCCCAGCGGAAGTAAGAATTTGTGTGTAACTTCCTAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCGTCACCACGCCCAGCGGAAGTAAGAATTTGTGTGTAACTTCCTAC  340

seq1  ATCTGCCCTATGCCTTGCTGCAGGGAACACGGAGGTATGAAGAGACTATG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCCCTATGCCTTGCTGCAGGGAACACGGAGGTATGAAGAGACTATG  390

seq1  TTTTC-AACTTGATGGTGGGACAACATCGGAGAGCGGTGGTCTAGCCGGT  446
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAACTTGATGGTGGGACAACATCGGAGAGCGGTGGTCTAGCCGGT  440

seq1  AGCCTAATGGCTGCAGGACTATGGAACCATCCCAAGTCTCCTACACTCAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAATGGCTGCAGGACTATGGAACCATCCCAAGTCTCCTACACTCAG  490

seq1  ACTTTTACACAGAAACAAAATAAAAGCTTGTCATTTTTTGATAGTCTTGC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTACACAGAAACAAAATAAAAGCTTGTCATTTTTTGATAGTCTTGC  540

seq1  CCAGGCCGGCTTCTAGTTTTTGACCCTTCTGCCCCAGCCTTCCACATTCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCGGCTTCTAGTTTTTGACCCTTCTGCCCCAGCCTTCCACATTCT  590

seq1  GGGAATACAGGTGTGCACTACCATGCCTTGTTGAATTTATGTCTTCTTGG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATACAGGTGTGCACTACCATGCCTTGTTGAATTTATGTCTTCTTGG  640

seq1  AGCCATAGTTATTTGTGTCTCTTGTACATATAGCTGAATCTATACCATAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATAGTTATTTGTGTCTCTTGTACATATAGCTGAATCTATACCATAA  690

seq1  GTAATATAGGGCCGAGGCAACACTGTCATGCTATTTAGACTGTATGAGAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATATAGGGCCGAGGCAACACTGTCATGCTATTTAGACTGTATGAGAA  740

seq1  TTTACATGGTAAAGCGAAGAAGAGAGCAGGCAAGGCATTACCATTAATAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATGGTAAAGCGAAGAAGAGAGCAGGCAAGGCATTACCATTAATAA  790

seq1  GAGAACTAAAAGTTCAGCAAGATTAGGGGGTGAAAAGACCAATACTAGTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTAAAAGTTCAGCAAGATTAGGGGGTGAAAAGACCAATACTAGTG  840

seq1  ATCCCCTTTAGCCTAGAAATAACTCATTATAAAACGTTCATAAAAATAAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCTTTAGCCTAGAAATAACTCATTATAAAACGTTCATAAAAATAAA  890

seq1  CTACCAGTTAAAACCATGAAAATACCCAGACCTGACAGATCTGTATGTTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAGTTAAAACCATGAAAATACCCAGACCTGACAGATCTGTATGTTT  940

seq1  TCTAGGAATTAACATAATAAAAAGCCTCAAGACATTTATGAAGAAAAATT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGAATTAACATAATAAAAAGCCTCAAGACATTTATGAAGAAAAATT  990

seq1  TGAAACCCACTGAAAGGATATAAAATAAGATGTAAATAAATGAAGAGCAG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACCCACTGAAAGGATATAAAATAAGATGTAAATAAATGAAGAGCAG  1040

seq1  TGGGTGGGAAGACACAATTATAACCCTGTTGAGGCTCACCTAATTAGTCT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGGAAGACACAATTATAACCCTGTTGAGGCTCACCTAATTAGTCT  1090

seq1  ATAAATTCAATGCAACTCCAATTAAAAACCAGAGCCCAAATTTAGGGGAC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTCAATGCAACTCCAATTAAAAACCAGAGCCCAAATTTAGGGGAC  1140

seq1  TTAATAAAAGAATTC  1161
      |||||||||||||||
seq2  TTAATAAAAGAATTC  1155