BAC Information

Click to search

BAC

Clone NameB6Ng01-028E01
Chromosome7 (Build37)
Map Location 111,068,593 - 111,069,668
singlet/doubletsinglet
Overlap geneOlfr631
Upstream geneOlfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582, Olfr583, Olfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1, Olfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65
Downstream geneOlfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028E01.bB6Ng01-028E01.g
ACCDH858782DH858783
length1,2601,049
definitionDH858782|Mus musculus domesticus DNA, BAC clone: B6Ng01-028E01, 5' end.DH858783|Mus musculus domesticus DNA, BAC clone: B6Ng01-028E01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagggcccatacctaaacataataaaagcaatttactgtaaacca
acaaccaatatcaaattaaactgacacatacttgaaacaatcccactgga
atcagggacaagacaaggatgcccactctccccatatctattcaatatag
tacttgaagtgttagttagaacaataagacagaaaaaaagtgatcaaagg
gatacaaattggtaaagaagaagtgaaggtatcactatttgcagatgata
tgatggtatacataaattctaccagagaacttctccagctgataaacaac
ttcagcaaagtgaatggatataaaattaactcaaataaatcagtagcctt
cctttatacaaaggataaacaggctgagaaagaagttagggtaaaaattc
cattcacaatagccacaaatagaataaaatatcttggagtaactctaacc
aaacaagtggaagacctgtatgaaaataattccaagtctctcaagaaaga
aatcgaagaagatcttagaaaatgtataaacttgtcatggttatggattg
gcaaaattaacatagtaaaaatggccatcctaccaaaggtaatctataga
tccaatgcaatcccaatcaaaatcccaacacaattcttcaaagacatgga
aagaacaattcttaaattcatctggaaaggcaaatacccataatagtgga
aacaaattttaacaataagagagcagctgggggaatcaccatccctgact
tcaagctttattacagagcaatagtgataaaaactgcatggtattggcac
agagacagacatgttgatcaatggaaaagaactgaagacccagaaataaa
accacacacttaaggttacttgatctttgagaaagacaccaaaaatatac
atggaaaaaagaaagcatcttcaataaatggtgctggtctagctggctgt
ctatatgtagaaaatgaaaatagactcatatttgtcaccttgtacaaagc
tcaagttcaagtggatcagacctcacataaaaccaggtacactgaatcta
taggaagaaagtgggaagagccttgaccaaaaagttacaggggaatgcct
aaacagaacctaagtgctccatgctctagaaccacatgataatggacctc
atggaactgaagcctctgtagccagacattgtccatagaccatggcacta
tggaagattctatccgaatcccactcagagtatctcgcaaccaaacctcc
attcaaaatg
gaattcactttgtagaccaggctggccttgaactcagaaatttgcctgcc
tctgcctcccgagcgctgggattaaaggtgtgcgccaccaccgcccggct
tccacagctgtttttgacagttttttttaaactgtttgctgtttttgaat
gtgtttttaaaaactgttttgaattctattgtacttaaactgtggccaag
tagaagccaacaattttgtctttcaacaacttattattattattattatt
attattattattattattattatatgcttcttatcttaggggtataagtc
acattgttgttttttatatttgcaatgctggcaatgtaattctgattatg
gcttcctttcccccgactactcctagatgctttataactccccactcacc
cataactacactgtttttttttttttctttcgtcattacggtatgaacag
gtatataataataataataataataataataataataataataataatag
taataataataatataaaataaaaccaaaacaaaccagagactgatgaaa
caaacaaactacgaggagcaaaagaaccaaagaaaaagcacaagaaacac
atgtagatgcagagacatatactttgtacacacagaaatcccataaaaac
ataacactggaagctgtaatatatatgcaaaagacttaggcagaaagaaa
gcaagaaagaaagacaaaaggagagaaacacagaaagaaagaaagaaaga
aagaaagaaagaaagaaagaaagaaagaaagaaagaaagaagaaggaagg
aaggaaggaaggaaggaaggagaagaaagaagaagaaagaagaagaaaga
agaaagaaagaagaaagaagaaaaagatgatatgtcaaacaagcattatg
agacatagatctcaaagtgcattgattttgggcactgtatcttaagagta
tctcctagcaaagaaaacaggaaatgaagagtgttttgaagtggatgcag
cttaactgctgattgactggaaaagcaaagggggcatgctttagcaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_111068593_111069668
seq2: B6Ng01-028E01.g_66_1114 (reverse)

seq1  CATTGCTTATGCATGCCCCCTTTGCTTTTCCAGTCAATCAAGCAGTTAAG  50
      ||||||| | ||||||||||||||||||||||||||||| ||||||||||
seq2  CATTGCTAAAGCATGCCCCCTTTGCTTTTCCAGTCAATC-AGCAGTTAAG  49

seq1  CTGCAATCCACTTC-AGACACTC-TCACTTTCTGTTTTCTCTGCTAGGAG  98
      |||| ||||||||| | |||||| ||| || ||||||||| |||||||||
seq2  CTGC-ATCCACTTCAAAACACTCTTCATTTCCTGTTTTCTTTGCTAGGAG  98

seq1  ATACTTCTATAAGATACAGTTGCCCAAAATCAATGGCACTTTTGGAGATT  148
      |||| ||| |||||||||| |||||||||||||| |||||||  |||| |
seq2  ATAC-TCT-TAAGATACAG-TGCCCAAAATCAAT-GCACTTT--GAGA-T  141

seq1  CTATGTCTCATAATGCTTTGTTTGGACATTATCTATCTTTTTTCTTTCTT  198
      |||||||||||||||| |||||| |||| |||| ||||||||       |
seq2  CTATGTCTCATAATGC-TTGTTT-GACA-TATC-ATCTTTTT------CT  181

seq1  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  248
      |||||| ||||||||||| |||||||||   |||||||||   |||||||
seq2  TCTTTC-TTCTTTCTTTC-TTCTTTCTT--CTTCTTTCTT--CTTCTTTC  225

seq1  TTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTT  298
      ||   |||||||||||||||||||||||||||||   |||||||||||||
seq2  TT--CTCCTTCCTTCCTTCCTTCCTTCCTTCCTT--CTTCTTTCTTTCTT  271

seq1  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTGTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTGTG  321

seq1  TTTCTCTCCTTTTGTCTTTCTTTCTTGCTTTCTTTCTGCCTAAGTCTTTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTCCTTTTGTCTTTCTTTCTTGCTTTCTTTCTGCCTAAGTCTTTT  371

seq1  GCATATATATTACAGCTTCCAGTGTTATGTTTTTATGGGATTTCTGTGTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATATATTACAGCTTCCAGTGTTATGTTTTTATGGGATTTCTGTGTG  421

seq1  TACAAAGTATATGTCTCTGCATCTACATGTGTTTCTTGTGCTTTTTCTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGTATATGTCTCTGCATCTACATGTGTTTCTTGTGCTTTTTCTTT  471

seq1  GGTTCTTTTGCTCCTCGTAGTTTGTTTGTTTCATCAGTCTCTGGTTTGTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTTTTGCTCCTCGTAGTTTGTTTGTTTCATCAGTCTCTGGTTTGTT  521

seq1  TTGGTTTTATTTTATATTATTATTATTACTATTATTATTATTATTATTAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTTATTTTATATTATTATTATTACTATTATTATTATTATTATTAT  571

seq1  TATTATTATTATTATTATTATTATATACCTGTTCATACCGTAATGACGAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTATTATTATTATTATTATATACCTGTTCATACCGTAATGACGAA  621

seq1  AGAAAAAAAAAAAAACAGTGTAGTTATGGGTGAGTGGGGAGTTATAAAGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAAAAAAAACAGTGTAGTTATGGGTGAGTGGGGAGTTATAAAGC  671

seq1  ATCTAGGAGTAGTCGGGGGAAAGGAAGCCATAATCAGAATTACATTGCCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGGAGTAGTCGGGGGAAAGGAAGCCATAATCAGAATTACATTGCCA  721

seq1  GCATTGCAAATATAAAAAACAACAATGTGACTTATACCCCTAAGATAAGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGCAAATATAAAAAACAACAATGTGACTTATACCCCTAAGATAAGA  771

seq1  AGCATATAATAATAATAATAATAATAATAATAATAATAATAATAATAAGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATAATAATAATAATAATAATAATAATAATAATAATAATAATAAGT  821

seq1  TGTTGAAAGACAAAATTGTTGGCTTCTACTTGGCCACAGTTTAAGTACAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAAAGACAAAATTGTTGGCTTCTACTTGGCCACAGTTTAAGTACAA  871

seq1  TAGAATTCAAAACAGTTTTTAAAAACACATTCAAAAACAGCAAACAGTTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTCAAAACAGTTTTTAAAAACACATTCAAAAACAGCAAACAGTTT  921

seq1  AAAAAAAACTGTCAAAAACAGCTGTGGAAGCCGGGCGGTGGTGGCGCACA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAACTGTCAAAAACAGCTGTGGAAGCCGGGCGGTGGTGGCGCACA  971

seq1  CCTTTAATCCCAGCGCTCGGGAGGCAGAGGCAGGCAAATTTCTGAGTTCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAATCCCAGCGCTCGGGAGGCAGAGGCAGGCAAATTTCTGAGTTCA  1021

seq1  AGGCCAGCCTGGTCTACAAAGTGAATTC  1076
      ||||||||||||||||||||||||||||
seq2  AGGCCAGCCTGGTCTACAAAGTGAATTC  1049