BAC Information

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BAC

Clone NameB6Ng01-028N08
Chromosome7 (Build37)
Map Location 126,464,099 - 126,465,060
singlet/doubletsinglet
Overlap genenone
Upstream geneSyt17, LOC100042845, E030018N11Rik, Coq7, Tmc7, B230311B06Rik, Tmc5, Mir16, 6330503K22Rik, 9030624J02Rik, 2310008H09Rik, Iqck, Gprc5b, Gpr139, LOC100042871
Downstream geneGp2, Umod, 1700007B13Rik, C730027J19Rik, Acsm2, Acsm1, BC048390, Thumpd1, EG434233, Acsm3, Exod1, 2610020H08Rik, Dcun1d3, LOC100043399, LOC100043396, Lyrm1, Dnahc3, Tmem159, Zp2, Anks4b, Crym, Abca14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028N08.bB6Ng01-028N08.g
ACCDH859207DH859208
length1,049962
definitionDH859207|Mus musculus domesticus DNA, BAC clone: B6Ng01-028N08, 5' end.DH859208|Mus musculus domesticus DNA, BAC clone: B6Ng01-028N08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaaaagaggaaactaaaagactgaaaagcacttaaagaaatat
tcaacatccttagtcctcagggaaatgcaaatcaaaacttctttgagatt
tttgtcttaagtcagaatggctaagatcaataaaacaaatgacagctcat
gctgtcgagcatgtggaggaaggagaacactcatctattgctagctagcg
ggagtgcaaacttgtacagccactgtggaagccagtgtggcggttcctgg
ggaatctgggaataaattaacctcaagatccagctgcaccacccttggac
agtaatcctactatagtgactccgctcagccatgttcattactactctat
tcacaatagccagaagctgaaaacaacctagatatctgtcaactggtgat
tggattataggaaatgtaatacatttacacaatgaaatattactctacca
ttaaataatggcatcatgaaatgcacaggacaatggatagaattagagaa
aaataatcctgagtgaggtaacccaattcagaaagacaaacacgatatac
atttacttatatgtgtttattagatcttaagtcattgataaacgagttgc
aatctgtagaaccacagaggttaggtatagagtaaaggagctagtgggga
gagacagatatcattaggaaagggaaatagaatagatagttacatctgga
tgcaagggtgggtgctggaatggtaggatcgaatggtgaaggtgagacaa
gagggatgcaagggagggagggaatatagggagggacagataaaactgag
tcatttaggggtgtttgatggatgcctaatacacttggagtttcatatat
tatatgaatatattacatattcatatatatgtgtatatatattcatatat
gtatgaatatatataaatgaaatccaatatataatgaaatcccatattat
agggagaaaaggccataactggaaatctgttgctacaaagaaggttcttt
tcttctaataaactggtggccaaggggtctcttaagaacctacaacaac
gaattcaccagaggaccactgtactcacacagcaggagttacctggataa
gaatcttggtcccaaaggacacatggaacagtttcagcagagatgtgaca
actgttcagattctctacctcatctgagatgttgcttcagctgccaggga
gactccaaacacagctgggtattttcctagcattaatgagagctgtacct
tggacgtagctacagagtaaaccatggagtgaactcagggggcagggaag
agtttttcagacatcctcaaccatctcagaccttccaggatacaggcatc
ttcccaatggatgtatagctggggcctctttggggaaatggtatcttggt
actaaaactagaatgttggcttctctacaagagataaattactataacct
ggagaaaagtctatgctcacattcaaagggaaccctcgattcctctccaa
agagacagacccactctttagtccaaaatgatagtctaggttcagctcaa
gatggacaatagaaggattagtaggcatagatcaaactctacagcattcc
tctggaaactttgaatacgtttctgctggccataaagagctggctccctt
ggcatatacctgtggttacacatcaaagcccaaagttaacctccaggctc
cccctgatcctggcaacatatttggaatatcaaccacatcccatgttatc
atcttcacctttcttacttcaccagctctttcccaactcagctagttccc
aggctgttccagattacaggccacgcccttctacagtggctctactctct
tatgaagacaaaatctccccaccccttccttgcttctctctgctatttcc
tctgctcctgagacatagccctgacaatcatcagtctaccactctggaca
tttcctatgtctctggctctttctctctctctctctctctctctctctct
ctctctctctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_126464099_126465060
seq2: B6Ng01-028N08.g_68_1029 (reverse)

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGCCAG  50

seq1  AGACATAGGAATTGTCCAGAGTGGTAGACTGATGATTGTCAGGGCTATGT  100
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGACATAGGAAATGTCCAGAGTGGTAGACTGATGATTGTCAGGGCTATGT  100

seq1  CTCAGGAGCAGAGGAAATAGCAGAGAGAAGCAAGGAAGGGGTGGGGAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGAGCAGAGGAAATAGCAGAGAGAAGCAAGGAAGGGGTGGGGAGAT  150

seq1  TTTGTCTTCATAAGAGAGTAGAGCCACTGTAGAAGGGCGTGGCCTGTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTCATAAGAGAGTAGAGCCACTGTAGAAGGGCGTGGCCTGTAAT  200

seq1  CTGGAACAGCCTGGGAACTAGCTGAGTTGGGAAAGAGCTGGTGAAGTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACAGCCTGGGAACTAGCTGAGTTGGGAAAGAGCTGGTGAAGTAAG  250

seq1  AAAGGTGAAGATGATAACATGGGATGTGGTTGATATTCCAAATATGTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTGAAGATGATAACATGGGATGTGGTTGATATTCCAAATATGTTGC  300

seq1  CAGGATCAGGGGGAGCCTGGAGGTTAACTTTGGGCTTTGATGTGTAACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATCAGGGGGAGCCTGGAGGTTAACTTTGGGCTTTGATGTGTAACCA  350

seq1  CAGGTATATGCCAAGGGAGCCAGCTCTTTATGGCCAGCAGAAACGTATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTATATGCCAAGGGAGCCAGCTCTTTATGGCCAGCAGAAACGTATTC  400

seq1  AAAGTTTCCAGAGGAATGCTGTAGAGTTTGATCTATGCCTACTAATCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTCCAGAGGAATGCTGTAGAGTTTGATCTATGCCTACTAATCCTT  450

seq1  CTATTGTCCATCTTGAGCTGAACCTAGACTATCATTTTGGACTAAAGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGTCCATCTTGAGCTGAACCTAGACTATCATTTTGGACTAAAGAGT  500

seq1  GGGTCTGTCTCTTTGGAGAGGAATCGAGGGTTCCCTTTGAATGTGAGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTGTCTCTTTGGAGAGGAATCGAGGGTTCCCTTTGAATGTGAGCAT  550

seq1  AGACTTTTCTCCAGGTTATAGTAATTTATCTCTTGTAGAGAAGCCAACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTTCTCCAGGTTATAGTAATTTATCTCTTGTAGAGAAGCCAACAT  600

seq1  TCTAGTTTTAGTACCAAGATACCATTTCCCCAAAGAGGCCCCAGCTATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTTTTAGTACCAAGATACCATTTCCCCAAAGAGGCCCCAGCTATAC  650

seq1  ATCCATTGGGAAGATGCCTGTATCCTGGAAGGTCTGAGATGGTTGAGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTGGGAAGATGCCTGTATCCTGGAAGGTCTGAGATGGTTGAGGAT  700

seq1  GTCTGAAAAACTCTTCCCTGCCCCCTGAGTTCACTCCATGGTTTACTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAAAAACTCTTCCCTGCCCCCTGAGTTCACTCCATGGTTTACTCTG  750

seq1  TAGCTACGTCCAAGGTACAGCTCTCATTAATGCTAGGAAAATACCCAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTACGTCCAAGGTACAGCTCTCATTAATGCTAGGAAAATACCCAGCT  800

seq1  GTGTTTGGAGTCTCCCTGGCAGCTGAAGCAACATCTCAGATGAGGTAGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTGGAGTCTCCCTGGCAGCTGAAGCAACATCTCAGATGAGGTAGAG  850

seq1  AATCTGAACAGTTGTCACATCTCTGCTGAAACTGTTCCATGTGTCCTTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGAACAGTTGTCACATCTCTGCTGAAACTGTTCCATGTGTCCTTTG  900

seq1  GGACCAAGATTCTTATCCAGGTAACTCCTGCTGTGTGAGTACAGTGGTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAAGATTCTTATCCAGGTAACTCCTGCTGTGTGAGTACAGTGGTCC  950

seq1  TCTGGTGAATTC  962
      ||||||||||||
seq2  TCTGGTGAATTC  962