BAC Information

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BAC

Clone NameB6Ng01-029H11
Chromosome7 (Build37)
Map Location 66,700,210 - 66,701,353
singlet/doubletsinglet
Overlap genenone
Upstream geneAtp10a, LOC621446, LOC668811, LOC668813, LOC668815, EG668818, Ube3a
Downstream geneLOC100040985, LOC100041010, LOC100041029, LOC100041051, Pwcr1, LOC664788, Snrpn, Snurf, EG664849
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029H11.bB6Ng01-029H11.g
ACCDH859662DH859663
length1,2181,107
definitionDH859662|Mus musculus domesticus DNA, BAC clone: B6Ng01-029H11, 5' end.DH859663|Mus musculus domesticus DNA, BAC clone: B6Ng01-029H11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagtacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggctagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagggacttgaagttttatcatac
agatctttcacttccttcgttagagtcacgccgagatattttatattatt
tgtggctatgagaaggtgttgtttccctaatttctttctcagcctgttat
tctttgtgtagagaagcattgactgttgagttaatttatatccagctact
caccgagctgttatcagtttaggagttctctggtgggattagggtcataa
taacatcaatcaactccgcaaggaatgactctcatcaattgtataccctg
attccttgttgcaatgctcggctactcagccatgataggggaactgggac
agtatccggaattaggag
gaattccagggatcctttgtgtgtccactgatgtttctatatggtagcca
ggaagacttgtgtgtgctgggctggtagtaatacaagaggtaaccccagg
acagtttctccacaatgaagttgtgccaatagagctccagaaatatgtct
ctctcctctgacctttatttaaaaaagggacaacaagcgccttgacttct
ttccctttcctccttagggaagacattcttccaagtatcaagaaagggag
cccttgcttccctggaagacatttcgtcccagcaatcactctccaggtcc
atgtgaccattcctactctgagccagttttggaaaggaaggtaagtggtt
ggatttgattaggtgatatccaagtagaggtagccgaattctgtctagga
ctgggtcaatgatgaaaacccaatgtcatgaagaaaagtgatgacataaa
attcatgctcaataggattacgctgaggcccaaccagggcgacagggtta
caagaggtccattgactccttggggggctcttgggtgacttccctgaagt
cctcagatgcccttgccctgtttcccatgagaggaaatgtggacatctag
ggtgcacattggttggcaaacactgcatgccaacaagcacctagtccccc
aatggaaccttgggcatttctgcaaggatcgcaccttgctcatgacaatg
tcttttctgttgttttgcagtcatctcacatgccaccttggaaggcagag
aaacacagataatcaggtaagtggtcagaacatggtaaagcctccacatc
caggtgacctcccccttcatgatttggctttcaattctcagccagtcggt
ccttttggatttggggataacaaatggtatgcaaaggtaccaaaggagct
cgatttaggctatgttctccgatgtacatccctggtttgtaacgttttag
ggatgtgtcactccctataattgtttttcatatttgacctactctatgag
agagagatgacttttttgatgttgcatctcatacttgatgcttacattca
tggcaatactacaggagacacctggctcagctttggactctttttccttg
acgggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_66700210_66701353
seq2: B6Ng01-029H11.g_65_1171 (reverse)

seq1  CTCCCCTGTCAAGGGAAAGGAAGAGTCCCATAAGGCCCTGGAGGCCAGTG  50
      |||||  ||||||| ||   ||||||||   || ||    ||| |  |||
seq2  CTCCC--GTCAAGGAAA---AAGAGTCC---AAAGC---TGAGCCAGGTG  39

seq1  TTGTCCTCCTGTAGTTATTTGCCATGGAATTGTAAGCATCAAAGTATGAG  100
      |    ||||||||||   ||||||||  | |||||||||| |||||||||
seq2  T----CTCCTGTAGT--ATTGCCATG--AATGTAAGCATC-AAGTATGAG  80

seq1  ATGCCAATATTCAAAAAATGTCATCCTCCTCTCTC-CATGAGAAGTAGGT  149
      ||| ||| | |||||||| |||||    ||||||| ||| || |||||||
seq2  ATG-CAACA-TCAAAAAA-GTCAT----CTCTCTCTCAT-AG-AGTAGGT  121

seq1  CAAAATTATGAAAAAACAATTATAGGGAGTTGAACACATTCCTTAAAACG  199
      ||||  |||| |||||||||||||||||||   ||||| ||| |||||||
seq2  CAAA--TATG-AAAAACAATTATAGGGAGT--GACACA-TCCCTAAAACG  165

seq1  TTACAAACCAGGGGATGTACATCGGAGAACATAGCCTAAATCGAGCTCCT  249
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTACAAACCA-GGGATGTACATCGGAGAACATAGCCTAAATCGAGCTCCT  214

seq1  TTGGTACCTTTGCATACCATTTTGTTATCCCCAAATTCCAAAAGGACCGA  299
      ||||||||||||||||||| ||||||||||||||| ||||||||||||||
seq2  TTGGTACCTTTGCATACCA-TTTGTTATCCCCAAA-TCCAAAAGGACCGA  262

seq1  CTGGCCGAGAATTGAAAGCGAAATCATGAAGGGGGAGGTCACCTGGATGT  349
      ||||| ||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTGGCTGAGAATTGAAAGCCAAATCATGAAGGGGGAGGTCACCTGGATGT  312

seq1  GGAGGCTTTACCATGTTCTGACCACTTACCTGATTATCTGTGTTTCTCTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCTTTACCATGTTCTGACCACTTACCTGATTATCTGTGTTTCTCTG  362

seq1  CCTTCCAAGGTGGCATGTGAGATGACTGCAAAACACCAGAAAAGACATTG  449
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCTTCCAAGGTGGCATGTGAGATGACTGCAAAACAACAGAAAAGACATTG  412

seq1  TCATGAGCAAGGTGCGATCCTTGCAGAAATGCCCAAGGTTCCATTGTGGG  499
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCATGAGCAAGGTGCGATCCTTGCAGAAATGCCCAAGGTTCCATTGGGGG  462

seq1  ACTAGGTGCTTGTTGGCATGCAGTGTTTGCCAACCAATGTGCACCCTAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGTGCTTGTTGGCATGCAGTGTTTGCCAACCAATGTGCACCCTAGA  512

seq1  TGTCCACATTTCCTCTCATGGGAAACAGGGCAAGGGCATCTGAGGACTTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCACATTTCCTCTCATGGGAAACAGGGCAAGGGCATCTGAGGACTTC  562

seq1  AGGGAAGTCACCCAAGAGCCCCCCAAGGAGTCAATGGACCTCTTGTAACC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGTCACCCAAGAGCCCCCCAAGGAGTCAATGGACCTCTTGTAACC  612

seq1  CTGTCGCCCTGGTTGGGCCTCAGCGTAATCCTATTGAGCATGAATTTTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCGCCCTGGTTGGGCCTCAGCGTAATCCTATTGAGCATGAATTTTAT  662

seq1  GTCATCACTTTTCTTCATGACATTGGGTTTTCATCATTGACCCAGTCCTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCACTTTTCTTCATGACATTGGGTTTTCATCATTGACCCAGTCCTA  712

seq1  GACAGAATTCGGCTACCTCTACTTGGATATCACCTAATCAAATCCAACCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAATTCGGCTACCTCTACTTGGATATCACCTAATCAAATCCAACCA  762

seq1  CTTACCTTCCTTTCCAAAACTGGCTCAGAGTAGGAATGGTCACATGGAAC  849
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTTACCTTCCTTTCCAAAACTGGCTCAGAGTAGGAATGGTCACATGGACC  812

seq1  TGGAGAGTGATTGCTGGGACGAAATGTCTTCCAGGGAAGCAAGGGCTCCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGTGATTGCTGGGACGAAATGTCTTCCAGGGAAGCAAGGGCTCCC  862

seq1  TCTCTTGATACTTGGAAGAATGTCTTCCCTAAGGAGGAAAGGGAAAGAAG  949
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGATACTTGGAAGAATGTCTTCCCTAAGGAGGAAAGGGAAAGAAG  912

seq1  TCAAGGCGCTTGTTGTCCCTTTTTTAAATAAAGGTCAGAGGAGAGAGACA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGCGCTTGTTGTCCCTTTTTTAAATAAAGGTCAGAGGAGAGAGACA  962

seq1  TATTTCTGGAGCTCTATTGGCACAACTTCATTGTGGAGAAACTGTCCTGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTGGAGCTCTATTGGCACAACTTCATTGTGGAGAAACTGTCCTGG  1012

seq1  GGTTACCTCTTGTATTACTACCAGCCCAGCACACACAAGTCTTCCTGGCT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACCTCTTGTATTACTACCAGCCCAGCACACACAAGTCTTCCTGGCT  1062

seq1  ACCATATAGAAACATCAGTGGACACACAAAGGATCCCTGGAATTC  1144
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATATAGAAACATCAGTGGACACACAAAGGATCCCTGGAATTC  1107