BAC Information

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BAC

Clone NameB6Ng01-030C15
Chromosome7 (Build37)
Map Location 107,166,454 - 107,310,813
singlet/doubletdoublet
Overlap geneChrdl2, Pold3, 2610209A20Rik
Upstream geneUvrag, Dgat2, Mogat2, Mtap6, Serpinh1, Gdpd5, 2810406K13Rik, Rps3, Rnu15-b, EG449630, Arrb1, EG245190, Slco2b1, Olfr520, Olfr521, Neu3, Spcs2, Xrra1, EG330602
Downstream geneKcne3, LOC631577, Pgm2l1, Gpx2-ps1, P4ha3, Ppme1, AU020772, Ucp3, Ucp2, Dnajb13, LOC667112, Chchd8, Mrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1, B930006L02Rik, LOC100041204, Tnfrsf19l, Arhgef17, P2ry6, P2ry2, LOC100049539, EG435996, Fchsd2, EG622673
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030C15.bB6Ng01-030C15.g
ACCDH860150DH860151
length1,168830
definitionDH860150|Mus musculus domesticus DNA, BAC clone: B6Ng01-030C15, 5' end.DH860151|Mus musculus domesticus DNA, BAC clone: B6Ng01-030C15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,166,454 - 107,167,644)(107,309,980 - 107,310,813)
sequence
gaattctccaggaagtgcgaggatgggagaacaggagcgggccaggggga
cacccagacaacaggtccctgttgggaggtcttgaattcattttctgggt
gatgctgggggcttctggctctcaaacccttggcaccttctttttcctca
cagaccaagagatggaagagacagaagctctaagagcctgtgtggttaag
ccagtctctgaggagactggagtgaggagcaagagacacagtcctcatct
ccattgggcctgctccttcctgggtctttccctctctctccccattgttc
ccctaatgtcagctttaggtagaacccagacacaaacagggatgcaactc
ccgcctacaaggctccagctgcctttttcttttttttaatccttagcaca
tctgaagccaataagccatttttaaaaagctttaggaaatgtagccagaa
aaacaaaggaaaccataacagaaaattgtagacatgtcacatggtgcagt
tgacaaaggccaagttgtgtgatctactggagcttactcacgtctccttc
cccagaggtcacacatgtagctactcatcttcggcccaaaggacaaagca
cagcctgaacaccctacctctctccaccatggccccatcttcaccaccta
agccactttcacctctcacctagtgagactgctgcatgggcctgccaaca
ggtctctctgttgtccctttcaaaatccattctgaacaaagcagctagaa
tgatcttccctaaatacagacctatggtgtttcttagctcttaaaaccat
ccaatagttcccccctcacacacatacttttggacgggtcttgtgtagct
agctaacctcaattcatctgaggtaatctaaacatctgattctgcctata
cctcaccttgcttgggtcatgggcatgtgcactgtgccactttctgcagt
gctaggaattgaacccaggctcatgtatgctgtcagccctctctagccca
gccactggcagttctgcatgattcacacccaccccttatcttccaactcc
atggccctcaatgcgccaaccagcctggggccggaacctcccacgttgga
catctttactattcctccatggatagcctctgtggtcctgagtatgacag
cttttcctcttcctggtt
gaattcacgtcctcacatttccacaagcgctttaatacactgagccatct
cccagcccacaatgggaggctctttacacggttcaattccactcagtttt
tatggctggtctcctgtatgccaggctcagcagttgcttgccagagatat
gaaggaaacaagacagtcacagttctattcttaaaggccctactgccatg
aggcaaagctacaggacctggggacagctcccttaagaaaagcaacggag
gcagggcagcggtggcacacacctttaagcctgcactaaggaaacagagg
gaggtggatctctgaattttaggccagcttggtctacagagtgagttcta
ggacagttaaacacagagaaaccttgtcttgaaaaaccaacctctccccc
cacaaaaaaaaaaaaaaaatcagcggagaacacactgtaacaatcataat
gagagcaggtgcggagcactggctctgtgctaatattatctcactgtgct
ccctgccattaggctatgtgactcctctctcgcctaggcagaaaccttca
cactgcttcatactgtgaaggtgtggctcaggaaggtcaactcagtcagc
caccacgtagctatcctctaccacccataatagcacatgccggtcggtgc
tcacacacagaatagcacaggtcagagctcacacaagatggggagttcaa
ggcctcctctggctcaatgaacatgctaggtcaccctgggatgaaacatt
gtcaaaatcaagtaaatgaaggcagacatggtttcaggccgggcttaaat
agggggcgggtagtcaagtgaggcttcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_107166454_107167644
seq2: B6Ng01-030C15.b_37_1204

seq1  GAATTCTCCAAGGAAGTGCGAGGATGGGAGAACAGGAGCGGGCCAGGGGG  50
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCC-AGGAAGTGCGAGGATGGGAGAACAGGAGCGGGCCAGGGGG  49

seq1  ACACCCAGACAACAGGTCCCTGTTGGGAGGTCTTGAATTCATTTTCTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCAGACAACAGGTCCCTGTTGGGAGGTCTTGAATTCATTTTCTGGG  99

seq1  TGATGCTGGGGGCTTCTGGCTCTCAGACCCTTGGCACCTTCTTTTTCCTC  150
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGATGCTGGGGGCTTCTGGCTCTCAAACCCTTGGCACCTTCTTTTTCCTC  149

seq1  ACAGACCAAGAGATGGAAGAGACAGAAGCTCTAAGAGCCTGTGTGGTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACCAAGAGATGGAAGAGACAGAAGCTCTAAGAGCCTGTGTGGTTAA  199

seq1  GCCAGTCTCTGAGGAGACTGGAGTGAGGAGCAAGAGACACAGTCCTCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTCTCTGAGGAGACTGGAGTGAGGAGCAAGAGACACAGTCCTCATC  249

seq1  TCCATTGGGCCTGCTCCTTCCTGGGTCTTTCCCTCTCTCTCCCCATTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGGGCCTGCTCCTTCCTGGGTCTTTCCCTCTCTCTCCCCATTGTT  299

seq1  CCCCTAATGTCAGCTTTAGGTAGAACCCAGACACAAACAGGGATGCAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTAATGTCAGCTTTAGGTAGAACCCAGACACAAACAGGGATGCAACT  349

seq1  CCCGCCTACAAGGCTCCAGCTGCCTTTTTCTTTTTTTTAATCCTTAGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCCTACAAGGCTCCAGCTGCCTTTTTCTTTTTTTTAATCCTTAGCAC  399

seq1  ATCTGAAGCCAATAAGCCATTTTTAAAAAGCTTTAGGAAATGTAGCCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAAGCCAATAAGCCATTTTTAAAAAGCTTTAGGAAATGTAGCCAGA  449

seq1  AAAACAAAGGAAACCATAACAGAAAATTGTAGACATGTCACATGGTGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAGGAAACCATAACAGAAAATTGTAGACATGTCACATGGTGCAG  499

seq1  TTGACAAAGGCCAAGTTGTGTGATCTACTGGAGCTTACTCACGTCTCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAAGGCCAAGTTGTGTGATCTACTGGAGCTTACTCACGTCTCCTT  549

seq1  CCCCAGAGGTCACACATGTAGCTACTCATCTTCGGCCCAAAGGACAAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGAGGTCACACATGTAGCTACTCATCTTCGGCCCAAAGGACAAAGC  599

seq1  ACAGCCTGAACACCCTACCTCTCTCCACCATGGCCCCATCTTCACCACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTGAACACCCTACCTCTCTCCACCATGGCCCCATCTTCACCACCT  649

seq1  AAGCCACTTTCACCTCTCACCTAGTGAGACTGCTGCATGGGCCTGCCAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCACTTTCACCTCTCACCTAGTGAGACTGCTGCATGGGCCTGCCAAC  699

seq1  AGGTCTCTCTGTTGTCCCTTTCAAAATCCATTCTGAACAAAGCAGCTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTCTCTGTTGTCCCTTTCAAAATCCATTCTGAACAAAGCAGCTAGA  749

seq1  ATGATCTTCCCTAAATACAGACCTATGGTGTTTCTTAGCTCTTAAAACCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCTTCCCTAAATACAGACCTATGGTGTTTCTTAGCTCTTAAAACCA  799

seq1  TCCAATAGTTCCCCCCTCACACACATACTTTTGGACGGGGTCTTGTGTAG  850
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCCAATAGTTCCCCCCTCACACACATACTTTTGGAC-GGGTCTTGTGTAG  848

seq1  CCTAGGCTAACCTCAAATTCATCTGAGGGTAATCTTAAACATCTGATTTC  900
       ||| ||||||||| ||||||||||| ||||||| ||||||||||| |||
seq2  -CTA-GCTAACCTC-AATTCATCTGA-GGTAATC-TAAACATCTGA-TTC  892

seq1  TGCCTATACCTCAACCTTGCTTGGGTCATGGGCATGTGCCACTGTGCCAA  950
      |||||||||||| ||||||||||||||||||||||||| ||||||||| |
seq2  TGCCTATACCTC-ACCTTGCTTGGGTCATGGGCATGTG-CACTGTGCC-A  939

seq1  CTTTCTGCAGTGCTAGGAATTGAACCCAGGGCTTCATGTATGCTGGTCAA  1000
      ||||||||||||||||||||||||||||||   ||||||||||| ||| |
seq2  CTTTCTGCAGTGCTAGGAATTGAACCCAGG--CTCATGTATGCT-GTC-A  985

seq1  GCCCTCTTCTAGCCCAGCCCACTGGCAGTTCTGCATGATCCAACACCCCA  1050
      |||||| |||||||||| ||||||||||||||||||||| | ||| ||||
seq2  GCCCTC-TCTAGCCCAG-CCACTGGCAGTTCTGCATGATTC-ACA-CCCA  1031

seq1  CCCCTTATCTTCCAACTCCAT-GCCCTCAATGCAGCCACACCAGCCTGGT  1099
      ||||||||||||||||||||| ||||||||||| |||| |||||||||| 
seq2  CCCCTTATCTTCCAACTCCATGGCCCTCAATGC-GCCA-ACCAGCCTGGG  1079

seq1  GCCTGAACCTCCAACGTTTGAAACATTTTTACCTATTCCCTCCATTGAAA  1149
      ||| |||||||| ||||| |  |||| |||| ||||| ||||||| |  |
seq2  GCCGGAACCTCCCACGTTGG--ACATCTTTA-CTATT-CCTCCATGG--A  1123

seq1  TAGCCTCTCGTGTCATGA--ATGACAGCTTTTCC-CTTCCTGGTT  1191
      ||||||||   ||| |||  |||||||||||||| ||||||||||
seq2  TAGCCTCTGTGGTCCTGAGTATGACAGCTTTTCCTCTTCCTGGTT  1168

seq1: chr7_107309980_107310813
seq2: B6Ng01-030C15.g_66_895 (reverse)

seq1  CAAGAAGCCTCACTTGACTACCCACCCCCTATCTAAGCCCGTGCCTGAAA  50
      ||||||||||||||||||||||| |||||||| |||||||| ||||||||
seq2  CAAGAAGCCTCACTTGACTACCCGCCCCCTATTTAAGCCCG-GCCTGAAA  49

seq1  CCATGTCTGCCTTCATTTACTTGAGTTTTGACAATGGTCTCAGCCCAGGC  100
      |||||||||||||||||||||||| |||||||||| || ||| |||||| 
seq2  CCATGTCTGCCTTCATTTACTTGA-TTTTGACAAT-GTTTCATCCCAGGG  97

seq1  TGACCTAGAACGTGCTATGTAGCCA-AGGATGACCTTGAACTCCCCATCC  149
      |||||||| | || | ||  ||||| |||| | |||||||||||||||| 
seq2  TGACCTAGCATGTTC-ATTGAGCCAGAGGA-GGCCTTGAACTCCCCATCT  145

seq1  TGTGTGAGCACTGACCTGTGCTATTCTGTGTGTGAGCACCGACCGGCATG  199
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGAGCTCTGACCTGTGCTATTCTGTGTGTGAGCACCGACCGGCATG  195

seq1  TGCTATTCTGGGTCGTAGAGGATAGCTACCTGGTGGCTGACTGAGTTGAC  249
      ||||||| ||||| ||||||||||||||| ||||||||||||||||||||
seq2  TGCTATTATGGGTGGTAGAGGATAGCTACGTGGTGGCTGACTGAGTTGAC  245

seq1  CTTCCTGAGCCACACCTTCACAGTATGAAGCAGTGTGAAGGTTTCTGCCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGAGCCACACCTTCACAGTATGAAGCAGTGTGAAGGTTTCTGCCT  295

seq1  AGGCGAGAGAGGAGTCACATAGCCTAATGGCAGGGAGCACACTGAGATAA  349
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGGCGAGAGAGGAGTCACATAGCCTAATGGCAGGGAGCACAGTGAGATAA  345

seq1  TATTAGCACAGAGCCAGTGCTCCGCACCTGCTCTCATTATGATTGTTACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGCACAGAGCCAGTGCTCCGCACCTGCTCTCATTATGATTGTTACA  395

seq1  GTCTGTTCTCCGCTGATTTTTTTTTTTTTTTTGTGGGGGGAGAGGTTGGT  449
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTCTCCGCTGATTTTTTTTTTTTTTTTGTGGGGGGAGAGGTTGGT  445

seq1  TTTTCAAGACAAGGTTTCTCTGTGTTTAACTGTCCTAGAACTCACTCTGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAGACAAGGTTTCTCTGTGTTTAACTGTCCTAGAACTCACTCTGT  495

seq1  AGACCAAGCTGGCCTAAAATTCAGAGATCCACCTCCCTCTGTTTCCTTAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAAGCTGGCCTAAAATTCAGAGATCCACCTCCCTCTGTTTCCTTAG  545

seq1  TGCAGGCTTAAAGGTGTGTGCCACCGCTGCCCTGCCTCCGTTGCTTTTCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGCTTAAAGGTGTGTGCCACCGCTGCCCTGCCTCCGTTGCTTTTCT  595

seq1  TAAGGGAGCTGTCCCCAGGTCCTGTAGCTTTGCCTCATGGCAGTAGGGCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGAGCTGTCCCCAGGTCCTGTAGCTTTGCCTCATGGCAGTAGGGCC  645

seq1  TTTAAGAATAGAACTGTGACTGTCTTGTTTCCTTCATATCTCTGGCAAGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGAATAGAACTGTGACTGTCTTGTTTCCTTCATATCTCTGGCAAGC  695

seq1  AACTGCTGAGCCTGGCATACAGGAGACCAGCCATAAAAACTGAGTGGAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTGAGCCTGGCATACAGGAGACCAGCCATAAAAACTGAGTGGAAT  745

seq1  TGAACCGTGTAAAGAGCCTCCCATTGTGGGCTGGGAGATGGCTCAGTGTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCGTGTAAAGAGCCTCCCATTGTGGGCTGGGAGATGGCTCAGTGTA  795

seq1  TTAAAGCGCTTGTGGAAATGTGAGGACCTGAATTC  834
      ||||||||||||||||||||||||||| |||||||
seq2  TTAAAGCGCTTGTGGAAATGTGAGGACGTGAATTC  830