BAC Information

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BAC

Clone NameB6Ng01-031I17
Chromosome7 (Build37)
Map Location 6,107,993 - 6,108,969
singlet/doubletsinglet
Overlap genenone
Upstream geneV1rd3, EG665150, Nlrp2, EG272350, V1rd4, EG665163, V1rd10, EG630071, EG665255, EG636697, EG636705, LOC636731, LOC673215, V1rd2, LOC100041627, LOC100041637, V1rd1, LOC100041647, V1rd11, LOC100041666, V1rd6, EG384525, EG269859, Nlrp4c, Zfp787
Downstream geneZfp444, Galp, Zfp371, EG627821, Zfp667, Zfp583, LOC100042467, LOC100042459, Zfp78, Zfp28, LOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5, Olfr1347, Olfr1348, Olfr1349, LOC665328, Olfr1350, Zim2, Zim1, Peg3, Usp29, LOC627961, Aurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031I17.bB6Ng01-031I17.g
ACCDH861126DH861127
length9641,064
definitionDH861126|Mus musculus domesticus DNA, BAC clone: B6Ng01-031I17, 5' end.DH861127|Mus musculus domesticus DNA, BAC clone: B6Ng01-031I17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctctgtgtggcccaggactcgggatggaacagtaactaccgtgg
ctgtgtctgatgctgccagtttgccttttagttttgttagctttgagcca
ggaagggatagttaatttttttttttttttttttttttactgtcctccgt
ttactctttacctttggggccattttaatacccctgctgtgggttcgcct
ttagccttttgatcagttacaagcagcctgtgatctttatcacccgttga
aaggtcctggctggtttatctttaatctaaccacggaagtccagcgcttg
aacatgaattacaggcagtttggacattttccattacagggctcagcata
ggcctcctcttgaattttctaactctctacacatccttaacagtctgctg
agcaaagacttctggagcaccttgctaaggagatggctatgctttccatt
ttcttagcttgtcctcaggtgtcatgtatcgttttgcctgtgggctttgc
ttctttaggctgcccaggattttctctggtgcaggaggagtttgtttaaa
aagtccatcccttacttagtccaagtgtcagcagcacctgacgcctgctt
ttgtaaaggtagttacgtgatgatgataccatttgtctcagagaagctga
cattgactttcaagtttcaaattgtgccttggaagcagatatctgtagag
ggtcctttcattccttttcttcatcatcagcatcctccaaactgtgatgg
acctttcttctagagagtaataagtcataaacacttaatttggagcccta
ctctgaaggttcgaggtcattcttgctatgtcacttagtaaagtaatgtg
acctctggttctctgcaaacagccgatttcaagatgagtcgtcccaaatg
cacccgcaccggagctcgagcgaaacatttggggaaaactcagatctcgt
gacgaattttttct
gaattctgtatcaaacataaaactggaatttcttataaccccatgggaca
aggaatagttgaatgtgctcatcgcaccttaaagacttggctttttaaaa
caaaacaggggcagttatatcccccaaggtcaccaaaggctcatcttgcc
tttactttatttgttctaaattttttgcaaactgatattaaaggtcaatc
tgcagcggatggccactggcatccagttacttctaattcttatgcattag
taaaatggaaggacccgctgactaactaatggaaggatccagatccagtt
ctaatctgaggaaggggctcggtttgtgttttattcatgagatgaagatg
gagcgcagtgactgccagagagattaattcgtcagatgaacacagattct
gaatcttctcgtaagtatcattttgaggactaaaattcctcttttactta
gaattcagctgggaacccaggctcccagaagagctgttttcctgctactc
tctgagccagctcccccacaggaagcagaagactagcttagctttacaat
ttgcaactgaataaagtacctggacttccccaaaagaagatttgatttgc
tactttctcattgtctagatcttgtttttcaagcaggtcaaccaacattc
ctccagccggaccatcgggcgtgcattcccccgcccccaagagcacacag
gtgacaactgctatcttcattccaaggacattccagcacatgactttcac
tctgagttgaaatttaggtttaccaagagggctagaaaagcaaatatttc
aatattaaaagaattgggttttattttgatagacgggcttagtcccttag
ctggcctctggttttcatccttgctgtactgcaaggtcccttagtcctca
ggctgtggggatacagagatgagaggatgacttcagctcttattcagcac
aaatcatggtgtattatgaaataatcttgtctaggcttgctaatctgagt
gacattccctttaggactgccaaatacagattggcataactggttcggga
ttctgaaaaagttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_6107993_6108969
seq2: B6Ng01-031I17.b_45_1008 (reverse)

seq1  AGAAAAAATTCGGTTCACGAGATCTGGAGTTTTTCCCCAAAATGTTTCCG  50
      ||||||||||||  ||||||||||| |||||||  ||| |||||||| ||
seq2  AGAAAAAATTCG--TCACGAGATCT-GAGTTTT--CCCCAAATGTTT-CG  44

seq1  CTCGAGCCTCCGGTGCGGGTTGCATTTTGGGACGACCTCATCTTGAAATC  100
      |||||| |||||||||||| |||| |||||||||| ||||||||||||||
seq2  CTCGAG-CTCCGGTGCGGG-TGCA-TTTGGGACGA-CTCATCTTGAAATC  90

seq1  GGCCTGTTTTGCAGAGAACCAGAGGTCACATTACCTTACTAAGTGACATA  150
      || ||| ||||||||||||||||||||||||||| |||||||||||||||
seq2  GG-CTG-TTTGCAGAGAACCAGAGGTCACATTACTTTACTAAGTGACATA  138

seq1  GCAAGAATGACCTCGAACCTTCAGAGTAGGGCTCCAAATTAAGTGTTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAATGACCTCGAACCTTCAGAGTAGGGCTCCAAATTAAGTGTTTAT  188

seq1  GACTTATTACTCTCCTAGAAGAAAGGTCCATCACAGTTTGGAGGATGCTG  250
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GACTTATTACTCT-CTAGAAGAAAGGTCCATCACAGTTTGGAGGATGCTG  237

seq1  ATGATGAAGAAAAGGAATGAAAGGACCCTCTACAGATATCTGCTTCCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGAAGAAAAGGAATGAAAGGACCCTCTACAGATATCTGCTTCCAAG  287

seq1  GCACAATTTGAAACTTGAAAGTCAATGTCAGCTTCTCTGAGACAAATGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAATTTGAAACTTGAAAGTCAATGTCAGCTTCTCTGAGACAAATGGT  337

seq1  ATCATCATCACGTAACTACCTTTACAAAAGCAGGCGTCAGGTGCTGCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCATCACGTAACTACCTTTACAAAAGCAGGCGTCAGGTGCTGCTGA  387

seq1  CACTTGGACTAAGTAAGGGATGGACTTTTTAAACAAACTCCTCCTGCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGGACTAAGTAAGGGATGGACTTTTTAAACAAACTCCTCCTGCACC  437

seq1  AGAGAAAATCCTGGGCAGCCTAAAGAAGCAAAGCCCACAGGCAAAACGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAATCCTGGGCAGCCTAAAGAAGCAAAGCCCACAGGCAAAACGAT  487

seq1  ACATGACACCTGAGGACAAGCTAAGAAAATGGAAAGCATAGCCATCTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGACACCTGAGGACAAGCTAAGAAAATGGAAAGCATAGCCATCTCCT  537

seq1  TAGCAAGGTGCTCCAGAAGTCTTTGCTCAGCAGACTGTTAAGGATGTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAGGTGCTCCAGAAGTCTTTGCTCAGCAGACTGTTAAGGATGTGTA  587

seq1  GAGAGTTAGAAAATTCAAGAGGAGGCCTATGCTGAGCCCTGTAATGGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTAGAAAATTCAAGAGGAGGCCTATGCTGAGCCCTGTAATGGAAA  637

seq1  ATGTCCAAACTGCCTGTAATTCATGTTCAAGCGCTGGACTTCCGTGGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCAAACTGCCTGTAATTCATGTTCAAGCGCTGGACTTCCGTGGTTA  687

seq1  GATTAAAGATAAACCAGCCAGGACCTTTCAACGGGTGATAAAGATCACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAAGATAAACCAGCCAGGACCTTTCAACGGGTGATAAAGATCACAG  737

seq1  GCTGCTTGTAACTGATCAAAAGGCTAAAGGCGAACCCACAGCAGGGGTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTGTAACTGATCAAAAGGCTAAAGGCGAACCCACAGCAGGGGTAT  787

seq1  TAAAATGGCCCCAAAGGTAAAGAGTAAACGGAGGACAGTAAAAAAAAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGGCCCCAAAGGTAAAGAGTAAACGGAGGACAGTAAAAAAAAAAA  837

seq1  AAAAAAAAAAAATTAACTATCCCTTCCTGGCTCAAAGCTAACAAAACTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAATTAACTATCCCTTCCTGGCTCAAAGCTAACAAAACTAA  887

seq1  AAGGCAAACTGGCAGCATCAGACACAGCCACGGTAGTTACTGTTCCATCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAAACTGGCAGCATCAGACACAGCCACGGTAGTTACTGTTCCATCC  937

seq1  CGAGTCCTGGGCCACACAGAGGAATTC  977
      |||||||||||||||||||||||||||
seq2  CGAGTCCTGGGCCACACAGAGGAATTC  964