BAC Information

Click to search

BAC

Clone NameB6Ng01-031L10
Chromosome7 (Build37)
Map Location 138,477,343 - 138,660,517
singlet/doubletdoublet
Overlap gene1700063I17Rik, 2310057M21Rik, Pstk, Ikzf5, Acadsb
Upstream geneLOC546005, Ate1, LOC100043163, Nsmce4a, Tacc2, LOC619876, Btbd16, EG434249, Plekha1, Htra1, Dmbt1, 4933402N03Rik, 5430419D17Rik, LOC546006, LOC100043173, Cuzd1, 1700007K09Rik
Downstream geneHmx3, Hmx2, Bub3, LOC677073, LOC100043679, Gpr26, Cpxm2, 4631426J05Rik, LOC100043682
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031L10.bB6Ng01-031L10.g
ACCDH861249DH861250
length932983
definitionDH861249|Mus musculus domesticus DNA, BAC clone: B6Ng01-031L10, 5' end.DH861250|Mus musculus domesticus DNA, BAC clone: B6Ng01-031L10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(138,477,343 - 138,478,278)(138,659,528 - 138,660,517)
sequence
gaattctcttaaccacatatatcttttccttccagctgagatgtgtaatt
gggtgtcaatgtctaggtgacaagtgtaacatcagactcaaaacttggct
caggtaacgtgaaccctctgaaaaaggaactttctcatcagagaaataat
ctgttcctgagaagaaatctgcatctgaacaaagcctcagaggtaagtat
cctagtagggggtatgggactttctctgaggtcaccttcgattaaaatta
gtaagtaaaaagtaagtaaagaaagaaattaataaatggagcttaaaaaa
ataagacaagaaaaaaaaatcatacaatacaaatttgcctaaaataggtt
tcctctctgactttgtagctgttcaaccatgaagggtgagcctctaccgg
tgtcactgaatgtgtgcttgaatcttaatagtcaacagcttcatgttgtt
tcactgttcagttgaaacactgccaatcacgaatggctttaaatgtaagg
atgtttaaaaaccttgatccgccactgcctttttaaataatcgaaaggca
actagcttttgattagcagactctcaaacggtagactttaaatgatccca
aatagtatttatagttcttggaacaagaaatgtgcttagacatggaattt
ggaattctgaggtggggctgtgggttgatgtcacacaggctggttcgggg
ctgtgacattctggcagccctggcagccctcagacctccaacagagaggt
acatcagcctgcatcttaagtgacctaacaggtatgtcagcttagatcct
gtatcttaagtgacctaacaggtatgtcagcttagatccttctttctcaa
gtcacaggttgagaaactcaaagtttctgaaacaccctattccaaaaccg
gctttttgttgtttattttgagtggtgtgtgt
gaattcattctgggagaaatcaggcctatagcctgcttggctgtggcttg
cctgctgagacttcttttccactaacttacattttaattaagaaagtcac
ccttcggtgaaaattgcagaactcttgtacttaagaatcaataaaatgtg
cacagtctaaaatgagattaataatggccaaactgtctattttgggagta
attatttattcatcaaagaaaaccagctgcttaaaactgtagtccatcat
gaccgaacaagacatttccacttcagtcctgttgttaaaattcccttcta
ttgctctgtctgctgttaaatataaaaagcaggaaggttcattctctacc
tgcatacattttaaataagaatttcaacattatcttgtccatttaaaata
attgtatgaaaatgtgaagaaatatgatcttataaaagctgcagtctgac
gcacccagggagtgagggaaaaagagcagagacgttgttatttaaaattc
atggagcctgtggcaagattgatggagagaggttcctttctgggacactc
atgaagcctggggcaagaggctcaggctgggaggctgggctcaggccagg
gtcccaggcccagcaagtgctctggggaggggtgctcacttcatcaacct
atccagagagaggagagagggtggtggttctcccagatgctggcactcca
aagctctggatcagaccaactataggaaagaggaaagagccagggtttct
atttggagtctgtgtaagtctaaaccccaaagtcatgacttgaggttgaa
ggacttaatcacatctgtgaagtccttctagaacagcggatctcaacctt
cctaatgcttcacccttagatacagttccttgtgttgtggtgaccccaac
cattaaagtactttgtcctacttcatactgtatttctactgttatgatca
tatgtaattatctgaatattcatgatatctgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_138477343_138478278
seq2: B6Ng01-031L10.b_46_977

seq1  GAATTCTCTTAACCACATATATCTTTTCCTTCCAGCTGAGATGTGTAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTAACCACATATATCTTTTCCTTCCAGCTGAGATGTGTAATT  50

seq1  GGGTGTCAATGTCTAGGTGACAAGTGTAACATCAGACTCAAAACTTGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTCAATGTCTAGGTGACAAGTGTAACATCAGACTCAAAACTTGGCT  100

seq1  CAGGTAACGTGAACCCTCTGAAAAAGGAACTTTCTCATCAGAGAAATAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAACGTGAACCCTCTGAAAAAGGAACTTTCTCATCAGAGAAATAAT  150

seq1  CTGTTCCTGAGAAGAAATCTGCATCTGAACAAAGCCTCAGAGGTAAGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCTGAGAAGAAATCTGCATCTGAACAAAGCCTCAGAGGTAAGTAT  200

seq1  CCTAGTAGGGGGTATGGGACTTTCTCTGAGGTCACCTTCGATTAAAATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTAGGGGGTATGGGACTTTCTCTGAGGTCACCTTCGATTAAAATTA  250

seq1  GTAAGTAAAAAGTAAGTAAAGAAAGAAATTAATAAATGGAGCTTAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTAAAAAGTAAGTAAAGAAAGAAATTAATAAATGGAGCTTAAAAAA  300

seq1  ATAAGACAAGAAAAAAAAATCATACAATACAAATTTGCCTAAAATAGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGACAAGAAAAAAAAATCATACAATACAAATTTGCCTAAAATAGGTT  350

seq1  TCCTCTCTGACTTTGTAGCTGTTCAACCATGAAGGGTGAGCCTCTACCGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCTGACTTTGTAGCTGTTCAACCATGAAGGGTGAGCCTCTACCGG  400

seq1  TGTCACTGAATGTGTGCTTGAATCTTAATAGTCAACAGCTTCATGTTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTGAATGTGTGCTTGAATCTTAATAGTCAACAGCTTCATGTTGTT  450

seq1  TCACTGTTCAGTTGAAACACTGCCAATCACGAATGGCTTTAAATGTAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTTCAGTTGAAACACTGCCAATCACGAATGGCTTTAAATGTAAGG  500

seq1  ATGTTTAAAAACCTTGATCCGCCACTGCCTTTTTAAATAATCGAAAGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAAAAACCTTGATCCGCCACTGCCTTTTTAAATAATCGAAAGGCA  550

seq1  ACTAGCTTTTGATTAGCAGACTCTCAAACGGTAGACTTTAAATGATCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCTTTTGATTAGCAGACTCTCAAACGGTAGACTTTAAATGATCCCA  600

seq1  AATAGTATTTATAGTTCTTGGAACAAGAAATGTGCTTAGACATGGAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTATTTATAGTTCTTGGAACAAGAAATGTGCTTAGACATGGAATTT  650

seq1  GGAATTCTGAGGTGGGGCTGTGGGTTGATGTCACACAGGCTGGTTCGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCTGAGGTGGGGCTGTGGGTTGATGTCACACAGGCTGGTTCGGGG  700

seq1  CTGTGACATTCTGGCAGCCCTGGCAGCCCTCAGACCTCCAACAGAGAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGACATTCTGGCAGCCCTGGCAGCCCTCAGACCTCCAACAGAGAGGT  750

seq1  ACATCAGCCTGCATCTTAAGTGACCTAACAGGTATGTCAGCTTAGATCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAGCCTGCATCTTAAGTGACCTAACAGGTATGTCAGCTTAGATCCT  800

seq1  GTATCTTAAGTGACCTAACAGGTATGTCAGCTTAGATCCTTCTTTCTCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTTAAGTGACCTAACAGGTATGTCAGCTTAGATCCTTCTTTCTCAA  850

seq1  GTCACAGGTTTGAGAAACTCAAAGTTTCTGAAACACCCTATTCCAAAACC  900
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGG-TTGAGAAACTCAAAGTTTCTGAAACACCCTATTCCAAAACC  899

seq1  GGCTTTTTTGTTGTTTTATTTTGAGGTGGTGTGTGT  936
      ||| ||||||||| |||||||||| |||||||||||
seq2  GGC-TTTTTGTTG-TTTATTTTGA-GTGGTGTGTGT  932

seq1: chr7_138659528_138660517
seq2: B6Ng01-031L10.g_67_1049 (reverse)

seq1  ATCAGATATCCTGAATA-TCAGATATTTACATTATGATTCATAACAGTAG  49
      |||||||||| |||||| ||||||| ||||| ||||| ||||||||||||
seq2  ATCAGATATCATGAATATTCAGATAATTACA-TATGA-TCATAACAGTAG  48

seq1  AAAATACAGTTATGAAGTAGGAACAAAGTAACTTAATGGTTGGGGGTCAC  99
       |||||||| ||||||||||| ||||||||  ||||||||| ||||||||
seq2  -AAATACAG-TATGAAGTAGG-ACAAAGTACTTTAATGGTT-GGGGTCAC  94

seq1  CACAACACAAGGAACTGTATCTAAGGGTTGAAGCATTAGGAAGGTTGAGA  149
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CACAACACAAGGAACTGTATCTAAGGG-TGAAGCATTAGGAAGGTTGAGA  143

seq1  TCCGCTGTTCTAGAAGGACTTCACAGATGTGATTAAGTCCTTCAACCTCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TCCGCTGTTCTAGAAGGACTTCACAGATGTGATTAAGTCCTTCAACCTC-  192

seq1  AAGTCATGACTTTGGGGTTTAGACTTACACAGACTCCAAATAGAAACCCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCATGACTTTGGGGTTTAGACTTACACAGACTCCAAATAGAAACCCT  242

seq1  GGCTCTTTCCTCTTTCCTATAGTTGGTCTGATCCAGAGCTTTGGAGTGCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTTTCCTCTTTCCTATAGTTGGTCTGATCCAGAGCTTTGGAGTGCC  292

seq1  AGCATCTGGGAGAACCACCACCCTCTCTCCTCTCTCTGGATAGGTTGATG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCTGGGAGAACCACCACCCTCTCTCCTCTCTCTGGATAGGTTGATG  342

seq1  AAGTGAGCACCCCTCCCCAGAGCACTTGCTGGGCCTGGGACCCTGGCCTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGCACCCCTCCCCAGAGCACTTGCTGGGCCTGGGACCCTGGCCTG  392

seq1  AGCCCAGCCTCCCAGCCTGAGCCTCTTGCCCCAGGCTTCATGAGTGTCCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGCCTCCCAGCCTGAGCCTCTTGCCCCAGGCTTCATGAGTGTCCC  442

seq1  AGAAAGGAACCTCTCTCCATCAATCTTGCCACAGGCTCCATGAATTTTAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGAACCTCTCTCCATCAATCTTGCCACAGGCTCCATGAATTTTAA  492

seq1  ATAACAACGTCTCTGCTCTTTTTCCCTCACTCCCTGGGTGCGTCAGACTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAACGTCTCTGCTCTTTTTCCCTCACTCCCTGGGTGCGTCAGACTG  542

seq1  CAGCTTTTATAAGATCATATTTCTTCACATTTTCATACAATTATTTTAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTTATAAGATCATATTTCTTCACATTTTCATACAATTATTTTAAA  592

seq1  TGGACAAGATAATGTTGAAATTCTTATTTAAAATGTATGCAGGTAGAGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAAGATAATGTTGAAATTCTTATTTAAAATGTATGCAGGTAGAGAA  642

seq1  TGAACCTTCCTGCTTTTTATATTTAACAGCAGACAGAGCAATAGAAGGGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCTTCCTGCTTTTTATATTTAACAGCAGACAGAGCAATAGAAGGGA  692

seq1  ATTTTAACAACAGGACTGAAGTGGAAATGTCTTGTTCGGTCATGATGGAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAACAACAGGACTGAAGTGGAAATGTCTTGTTCGGTCATGATGGAC  742

seq1  TACAGTTTTAAGCAGCTGGTTTTCTTTGATGAATAAATAATTACTCCCAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTTTTAAGCAGCTGGTTTTCTTTGATGAATAAATAATTACTCCCAA  792

seq1  AATAGACAGTTTGGCCATTATTAATCTCATTTTAGACTGTGCACATTTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGACAGTTTGGCCATTATTAATCTCATTTTAGACTGTGCACATTTTA  842

seq1  TTGATTCTTAAGTACAAGAGTTCTGCAATTTTCACCGAAGGGTGACTTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTCTTAAGTACAAGAGTTCTGCAATTTTCACCGAAGGGTGACTTTC  892

seq1  TTAATTAAAATGTAAGTTAGTGGAAAAGAAGTCTCAGCAGGCAAGCCACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTAAAATGTAAGTTAGTGGAAAAGAAGTCTCAGCAGGCAAGCCACA  942

seq1  GCCAAGCAGGCTATAGGCCTGATTTCTCCCAGAATGAATTC  990
      |||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGCAGGCTATAGGCCTGATTTCTCCCAGAATGAATTC  983