BAC Information

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BAC

Clone NameB6Ng01-033J05
Chromosome7 (Build37)
Map Location 59,902,490 - 60,010,784
singlet/doubletdoublet
Overlap geneEG620782
Upstream geneSlc17a6, EG620599, LOC654473, LOC100040608, Gas2, 1700015G11Rik, EG668783
Downstream geneLOC100040692, Gm1865, LOC100040718
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033J05.bB6Ng01-033J05.g
ACCDH862586DH862587
length8841,071
definitionDH862586|Mus musculus domesticus DNA, BAC clone: B6Ng01-033J05, 5' end.DH862587|Mus musculus domesticus DNA, BAC clone: B6Ng01-033J05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,009,901 - 60,010,784)(59,902,490 - 59,903,596)
sequence
gaattcctcattcttatttctattaattatagatacttcattttagagta
aattttctttggaacattgaatatctccacttcaatatggaccagaacat
gtaggttcctattatatatatagtgcatctattatttacctgtatatact
tagttaaaataggtattggaggctatctgaggcacaggccaaaggattta
acactgaaaacttttatccaacccatgaaaatgtaaagtgacattgtgct
ataaactgtgactgtctagatgctagcagcttcctcttcatagatgtaaa
tatgatattgtggatattattctttaaataaagaagcagccatgttatcc
ttagaaaagaatgatgtgcctaaggggtaagttcttacagttattaatct
gtgctaggaaattgttcttcaaatgaaccataataatttcttgttcttaa
tagcaattataatgtgtgcctctcttgttccctaagtcctgtcaattact
aatatttagtactcttaaacagccctttctaaattaccttaatatatagt
gatactccatacataatgttgtataaatacttaatatggtgtgttgactt
gctaaggatatctataataaagctagagattatagtttgaaaacctgtat
gcaaacatttttactgcccccctggagctataggacacagctcaaaacaa
tagtaagccatgcgtacagggcttttgtgatagcaacaaattcacctgtt
cccaatattaataattttggctgaaggacacatgagtcctgaaacgggtt
gcaagctagtgttcttctagttcccagtaaatcttaggttaagatgttct
atcacctatgctttctaaactagatcacaaactg
gaattctcccttctggaatgacttcctttagtcctttagtgtaattgtaa
atttcagattggagtcctctaaatgttccctattttgattcaaataatcc
tctaatctctgttctgtggtctgcaacctagcatctaatctctcaggttt
ttcttcaaatctgttttattttggtgctccctgcccccaccaagaggatg
tacaaatctataatcattattgaagaaacaatttgtatacttagaagcaa
aacaaaggcatttggaatccaaacacattgtgtcactgtgttttcctcca
ttttcaacatagaaagtactttttaaatcttccactatttccctaaggca
tttgctttcctattttcaaacaaatatttctttttatgacttcttttttt
agccagcttcccttctcttttattgtttttctaattcaataccttagcag
ttcagatgcttggggtgtcacgtcttgcaccttgggctgcccttagccct
gcaccagctcttttgttcgcttttctcaagggttgttggacctatcccaa
ttccacttacagggaagagatggaagaggcaaggaatttttccagagatc
ttctttagctcacaagctctctataacatccaactccaggtggagccact
ctgacttctgggctgccatcaatgtggacccaaatcacccttatttttca
gatttatatctctatggttttaatttctagatgtaggttgaatatactcc
aataataaacagaaaactcaatgctcacaaactcttaatgcctgtgcttt
ttaaaagtaatcaagtgtctggccatacaacccagtagtagaacacatgg
ctaaaagctacatgttctaagtttactttagcattgataaaatgaaaata
aggaatatattggtcatgaactttttctttactgaggacaaacatgaatg
atctggaattgtttattgatacaagagtggaggtctatagtagaaccgat
gtcatgagattttttctgatttttccaaaagcgatttaataggcaagtat
gttactttgaacactttttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_60009901_60010784
seq2: B6Ng01-033J05.b_42_925 (reverse)

seq1  CAGTTTGTGATCTAGTTTAGAAAGCATAGGTGATAGAACAACATAACCTA  50
      |||||||||||||||||||||||||||||||||||||||| | |||||||
seq2  CAGTTTGTGATCTAGTTTAGAAAGCATAGGTGATAGAACATCTTAACCTA  50

seq1  TGATTTACTGGGAACTAGAAGAACACTAGCTTTGCAACCCCTTTCAGGAC  100
       ||||||||||||||||||||||||||||| ||||||||| |||||||||
seq2  AGATTTACTGGGAACTAGAAGAACACTAGC-TTGCAACCCGTTTCAGGAC  99

seq1  TCATGTGTCCTTCAGCCAAAATTATTAATATTGGGAACAGGTGAATTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGTCCTTCAGCCAAAATTATTAATATTGGGAACAGGTGAATTTGT  149

seq1  TGCTATCACAAAAGCCCTGTATGCATGGCTTACTATTGTTTTGAGCTGTG  200
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGCTATCACAAAAGCCCTGTACGCATGGCTTACTATTGTTTTGAGCTGTG  199

seq1  TCCTATAGCTCCA-GGGGGCAGTAAAAATGTTTGCATACAGGTTTTCAAA  249
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TCCTATAGCTCCAGGGGGGCAGTAAAAATGTTTGCATACAGGTTTTCAAA  249

seq1  CTATAATCTCTAGCTTTATTATAGATATCCTTAGCAAGTCAACACACCAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAATCTCTAGCTTTATTATAGATATCCTTAGCAAGTCAACACACCAT  299

seq1  ATTAAGTATTTATACAACATTATGTATGGAGTATCACTATATATTAAGGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTATTTATACAACATTATGTATGGAGTATCACTATATATTAAGGT  349

seq1  AATTTAGAAAGGGCTGTTTAAGAGTACTAAATATTAGTAATTGACAGGAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGAAAGGGCTGTTTAAGAGTACTAAATATTAGTAATTGACAGGAC  399

seq1  TTAGGGAACAAGAGAGGCACACATTATAATTGCTATTAAGAACAAGAAAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGAACAAGAGAGGCACACATTATAATTGCTATTAAGAACAAGAAAT  449

seq1  TATTATGGTTCATTTGAAGAACAATTTCCTAGCACAGATTAATAACTGTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATGGTTCATTTGAAGAACAATTTCCTAGCACAGATTAATAACTGTA  499

seq1  AGAACTTACCCCTTAGGCACATCATTCTTTTCTAAGGATAACATGGCTGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTACCCCTTAGGCACATCATTCTTTTCTAAGGATAACATGGCTGC  549

seq1  TTCTTTATTTAAAGAATAATATCCACAATATCATATTTACATCTATGAAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTATTTAAAGAATAATATCCACAATATCATATTTACATCTATGAAG  599

seq1  AGGAAGCTGCTAGCATCTAGACAGTCACAGTTTATAGCACAATGTCACTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCTGCTAGCATCTAGACAGTCACAGTTTATAGCACAATGTCACTT  649

seq1  TACATTTTCATGGGTTGGATAAAAGTTTTCAGTGTTAAATCCTTTGGCCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTTCATGGGTTGGATAAAAGTTTTCAGTGTTAAATCCTTTGGCCT  699

seq1  GTGCCTCAGATAGCCTCCAATACCTATTTTAACTAAGTATATACAGGTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTCAGATAGCCTCCAATACCTATTTTAACTAAGTATATACAGGTAA  749

seq1  ATAATAGATGCACTATATATATAATAGGAACCTACATGTTCTGGTCCATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAGATGCACTATATATATAATAGGAACCTACATGTTCTGGTCCATA  799

seq1  TTGAAGTGGAGATATTCAATGTTCCAAAGAAAATTTACTCTAAAATGAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTGGAGATATTCAATGTTCCAAAGAAAATTTACTCTAAAATGAAG  849

seq1  TATCTATAATTAATAGAAATAAGAATGAGGAATTC  884
      |||||||||||||||||||||||||||||||||||
seq2  TATCTATAATTAATAGAAATAAGAATGAGGAATTC  884

seq1: chr7_59902490_59903596
seq2: B6Ng01-033J05.g_68_1138

seq1  GAATTCTCTCTTCTGGAATGACTTCCTTTAGTCCTTTAGTGTAATTGTAA  50
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCTTCTGGAATGACTTCCTTTAGTCCTTTAGTGTAATTGTAA  50

seq1  ATTTCAGATTGGAGTCCTCTAAATGTTCCCTATTTTGATTCAAATAATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGATTGGAGTCCTCTAAATGTTCCCTATTTTGATTCAAATAATCC  100

seq1  TCTAATCTCTGTTCTGTGGTCTGCAACCTAGCATCTAATCTCTCAGGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATCTCTGTTCTGTGGTCTGCAACCTAGCATCTAATCTCTCAGGTTT  150

seq1  TTCTTCAAATCTGTTTTATTTTGGTGCTCCCTGCCCCCACCAAGAGGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAAATCTGTTTTATTTTGGTGCTCCCTGCCCCCACCAAGAGGATG  200

seq1  TACAAATCTATAATCATTATTGAAGAAACAATTTGTATACTTAGAAGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATCTATAATCATTATTGAAGAAACAATTTGTATACTTAGAAGCAA  250

seq1  AACAAAGGCATTTGGAATCCAAACACATTGTGTCACTGTGTTTTCCTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGGCATTTGGAATCCAAACACATTGTGTCACTGTGTTTTCCTCCA  300

seq1  TTTTCAACATAGAAAGTACTTTTTAAATCTTCCACTATTTCCCTAAGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAACATAGAAAGTACTTTTTAAATCTTCCACTATTTCCCTAAGGCA  350

seq1  TTTGCTTTCCTATTTTCAAACAAATATTTCTTTTTATGACTTCTTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTTCCTATTTTCAAACAAATATTTCTTTTTATGACTTCTTTTTTT  400

seq1  AGCCAGCTTCCCTTCTCTTTTATTGTTTTTCTAATTCAATACCTTAGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGCTTCCCTTCTCTTTTATTGTTTTTCTAATTCAATACCTTAGCAG  450

seq1  TTCAGATGCTTGGGGTGTCACGTCTTGCACCTTGGGCTGCCCTTAGCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATGCTTGGGGTGTCACGTCTTGCACCTTGGGCTGCCCTTAGCCCT  500

seq1  GCACCAGCTCTTTTGTTCGCTTTTCTCAAGGGTTGTTGGACCTATCCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCAGCTCTTTTGTTCGCTTTTCTCAAGGGTTGTTGGACCTATCCCAA  550

seq1  TTCCACTTACAGGGAAGAGATGGAAGAGGCAAGGAATTTTTCCAGAGATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTTACAGGGAAGAGATGGAAGAGGCAAGGAATTTTTCCAGAGATC  600

seq1  TTCTTTAGCTCACAAGCTCTCTATAACATCCAACTCCAGGTGGAGCCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTAGCTCACAAGCTCTCTATAACATCCAACTCCAGGTGGAGCCACT  650

seq1  CTGACTTCTGGGCTGCCATCAATGTGGACCCAAATCAGCCTTATTTTTCA  700
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTGACTTCTGGGCTGCCATCAATGTGGACCCAAATCACCCTTATTTTTCA  700

seq1  GATTTATATCTCTATGGTTTTAATTTCTAGATGTAGGTTGAATATACTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATATCTCTATGGTTTTAATTTCTAGATGTAGGTTGAATATACTCC  750

seq1  AATAATAAACAGAAAACTCAATGCTCACAAACTCTTAATGCCTGTGCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAAACAGAAAACTCAATGCTCACAAACTCTTAATGCCTGTGCTTT  800

seq1  TTAGAAAGTAATCAAGTGTCTGGCCATACAACCCAGTAGTAGAACACATG  850
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTA-AAAGTAATCAAGTGTCTGGCCATACAACCCAGTAGTAGAACACATG  849

seq1  GCTAAAAGCTACAATGTTCTAAGTTTTAACTTTAGCATTGATAAAAATGA  900
      |||||||||||| |||||||||||||  |||||||||||||| |||||||
seq2  GCTAAAAGCTAC-ATGTTCTAAGTTT--ACTTTAGCATTGAT-AAAATGA  895

seq1  AAAAGTAAAGGAAATTATATTGGTCATGAACCATTTTTCTTTTACTGAGG  950
      |||    ||||||  ||||||||||||||||  |||||| ||||||||||
seq2  AAA---TAAGGAA--TATATTGGTCATGAAC--TTTTTC-TTTACTGAGG  937

seq1  ACAAAACAATGAAATGATCTGGACATTGTTTTATTGATACAAAGAGTGGA  1000
      |||||   ||| ||||||||||| |||| ||||||||||| |||||||||
seq2  ACAAA--CATG-AATGATCTGGA-ATTG-TTTATTGATAC-AAGAGTGGA  981

seq1  GGTACTATCAAGAAGAAACACAAATGTCATGAAGATTTTTTTCTGATAGT  1050
      ||| ||||  || |||   ||  |||||||| ||| |||||||||||  |
seq2  GGT-CTAT--AGTAGA---ACCGATGTCATG-AGA-TTTTTTCTGAT--T  1021

seq1  TTTCAAAAAGCAACTTAGATAACGCAAAGTTTTGTTTCTTTTGACAACAC  1100
      |||| |||||| | ||| || | ||||   | |||| ||||    |||||
seq2  TTTCCAAAAGCGATTTA-AT-AGGCAA--GTATGTTACTTT---GAACAC  1064

seq1  TTTTTCA  1107
      |||||||
seq2  TTTTTCA  1071