BAC Information

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BAC

Clone NameB6Ng01-033M09
Chromosome7 (Build37)5 (Build37)
Map Location 144,004,317 - 144,004,9497,427,578 - 7,427,673
singlet/doubletsingletsinglet
Overlap geneEG668771
Upstream geneLOC668764, LOC546009, EG621677
Downstream geneMgmt, EG621804, Ebf3, 9430038I01Rik, Txnl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033M09.bB6Ng01-033M09.g
ACCDH862731DH862732
length634351
definitionDH862731|Mus musculus domesticus DNA, BAC clone: B6Ng01-033M09, 5' end.DH862732|Mus musculus domesticus DNA, BAC clone: B6Ng01-033M09, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(144,004,317 - 144,004,949)(7,427,578 - 7,427,673)
sequence
ggaattcttaactcaaaaaaaaaaagactatatcccatggacccctaaaa
ggaacgtgagaaccccgagaatccccagagctgactttcaaacgctctgt
accatgtgcttttctagatttgaactgcaaaacaataacaaggcaaagct
aggtgacatttctgcatcctgacctcatggtctgagaagactatagaacc
aatctttcacttgcaatcgtgggtactgtgcagagtcctggggatagggg
gcaattagcttaaggtcagagaaggcttcgtggttaggcaatgccacaca
gatgccttcaaggtaccagggttgctatcctggccacagggtattcagat
atcttggtgctcttccacaatattcaaattgcaagattgaaatgcagaaa
gacatttgtcaccaagtctgatgacctaagctcagtttctgggtcccatg
tggtggaaagaatggactgccccaaattgtcctctgaccttcaccatagc
ctgtatgtacccacccatgcacatacatacatacatacatacatacatac
atacatacgtacatatatggaggaaagaaagaatgggacagagcgaggga
aggaaggagggagggaaggaaagaagaagggaga
gaattcacgacagaatcttgagatggccaagaagcacttaaagagatgtt
caaagtcctcaatactcatcagagaaacgcaaatcaaaacaaccctgaga
ttccaccttataccaatcagaatggctaagatcaaaaactcaagtgatag
cacatcctggtgagggtgtggaataagaggaacactccttcattgctagt
gggattgcaaactgataacaactctggaaaccaatctggtggttcctcag
aaaattggaaatagatctacctgaagacccagctatatactcgtggttat
atacccaaaagatgccccaccctaccccaaggacacatgctccactatgt
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_144004317_144004949
seq2: B6Ng01-033M09.b_44_676

seq1  GAATTCTTAACTCAAAAAAAAAAAGACTATATCCCATGGACCCCTAAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAACTCAAAAAAAAAAAGACTATATCCCATGGACCCCTAAAAG  50

seq1  GAACGTGAGAACCCCGAGAATCCCCAGAGCTGACTTTCAAACGCTCTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGTGAGAACCCCGAGAATCCCCAGAGCTGACTTTCAAACGCTCTGTA  100

seq1  CCATGTGCTTTTCTAGATTTGAACTGCAAAACAATAACAAGGCAAAGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGCTTTTCTAGATTTGAACTGCAAAACAATAACAAGGCAAAGCTA  150

seq1  GGTGACATTTCTGCATCCTGACCTCATGGTCTGAGAAGACTATAGAACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACATTTCTGCATCCTGACCTCATGGTCTGAGAAGACTATAGAACCA  200

seq1  ATCTTTCACTTGCAATCGTGGGTACTGTGCAGAGTCCTGGGGATAGGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCACTTGCAATCGTGGGTACTGTGCAGAGTCCTGGGGATAGGGGG  250

seq1  CAATTAGCTTAAGGTCAGAGAAGGCTTCGTGGTTAGGCAATGCCACACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAGCTTAAGGTCAGAGAAGGCTTCGTGGTTAGGCAATGCCACACAG  300

seq1  ATGCCTTCAAGGTACCAGGGTTGCTATCCTGGCCACAGGGTATTCAGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTCAAGGTACCAGGGTTGCTATCCTGGCCACAGGGTATTCAGATA  350

seq1  TCTTGGTGCTCTTCCACAATATTCAAATTGCAAGATTGAAATGCAGAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTGCTCTTCCACAATATTCAAATTGCAAGATTGAAATGCAGAAAG  400

seq1  ACATTTGTCACCAAGTCTGATGACCTAAGCTCAGTTTCTGGGTCCCATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGTCACCAAGTCTGATGACCTAAGCTCAGTTTCTGGGTCCCATGT  450

seq1  GGTGGAAAGAATGGACTGCCCCAAATTGTCCTCTGACCTTCACCATAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAAAGAATGGACTGCCCCAAATTGTCCTCTGACCTTCACCATAGCC  500

seq1  TGTATGTACCCACCCATGCACATACATACATACATACATACATACATACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTACCCACCCATGCACATACATACATACATACATACATACATACA  550

seq1  TACATACGTACATATATGGAGGAAAGAAAGAATGGGACAGAGCGAGGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACGTACATATATGGAGGAAAGAAAGAATGGGACAGAGCGAGGGAA  600

seq1  GGAAGGAGGGAGGGAAGGAAAGAAGAAGGGAGA  633
      |||||||||||||||||||||||||||||||||
seq2  GGAAGGAGGGAGGGAAGGAAAGAAGAAGGGAGA  633

seq1: chr5_7427578_7427673
seq2: B6Ng01-033M09.g_325_419 (reverse)

seq1  AACATAGTGGAGCACATGTTCTTGTTATATGTTGAAGAATCTTTTAGGTA  50
      ||||||||||||||  ||| ||||   || | ||  | ||||||| ||||
seq2  AACATAGTGGAGCATGTGTCCTTGGGGTAGGGTGGGGCATCTTTTGGGTA  50

seq1  TGTGCCCAAGAGTGGTGTAGCTGGGTCTTCAGGTAGATCTATTTCC  96
      | |  ||| ||||  | |||||||||||||||||||||||||||||
seq2  TATAACCACGAGT-ATATAGCTGGGTCTTCAGGTAGATCTATTTCC  95