BAC Information

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BAC

Clone NameB6Ng01-033P03
Chromosome7 (Build37)
Map Location 72,100,976 - 72,207,100
singlet/doubletdoublet
Overlap genenone
Upstream geneTrpm1, BB128963, Mtmr15, LOC100041582, Mphosph10, Mcee, Apba2, 5730507A09Rik, Ndnl2
Downstream geneTjp1, Gm1693, EG665234, Tarsl2, Tm2d3, LOC665241, Pcsk6, Snrpa1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033P03.bB6Ng01-033P03.g
ACCDH862848DH862849
length1,065181
definitionDH862848|Mus musculus domesticus DNA, BAC clone: B6Ng01-033P03, 5' end.DH862849|Mus musculus domesticus DNA, BAC clone: B6Ng01-033P03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,206,034 - 72,207,100)(72,100,976 - 72,101,156)
sequence
gaattcactacccagtctcttcatgtcctgcacctcacggtagacacagt
aatggcagcacactgggggcacactggggtgcttcttcacccacccagag
gcctctgccttgttcttccaatggtcgtatgtatgctgtgattttctctg
ccgtgatagagagcttttatttaactctgtaccaaccccttgatcttgtc
agagactttataagtggttcagagaaacccattcttctgctttcatagtc
ttactggctctaacataatctcgaacctccatcgcttgctggaagtcagt
gcttaagcacttctgacttctcacagacatggactctgggaaaggagcaa
acagcttccagggtggtgaaacaatgtagctgtaaagaaatatagaggtg
gtgatttctctgtgcaattctgtgacttgagccagtgtctctgggaatgt
gttgaaggaagccttctgagctagaagaaaatcttgttttaaactttaat
gtatttaaagggttttcttttctccttaaactttatttatttatttaaag
tttttcctccttaaacttatttatttaattatttttatttatttatgctc
aggatgaaagggagaaaacaaggggcctcatacgtacatttcttcatcca
ctggcctttcttgtttcaaaagtttgactaacagaaattaattgtggtcc
aggtttaaggtggcgtacgtgtgatatttctgtcatatagttcatacagg
taaagtcaggctgcttgccatgttcatctcctccattctttgtgtttgga
attttataatctttctcttctggtcattagtaaaataagttgtgtgtttg
tcaccatggtcacagctgtgccgcagaacagtaggacgcatttactcgca
tgtctttaaaggctgtaacggcggttaagagtgcaggtgtgagttcccgc
ctgaaccactctgacatcacagtgcattcccgatgcaatggcctcgtcta
ccttagttgaaactgttgactgtttaattcttcagctttctgctagcctg
tggcctccagtccct
atcactgttccatgtagccagcagacatgactcaagaactcttggaaggg
tggcatttgcttaactaggatatgaaggtgtatatgatgtgaatgtgcac
tccaagaaggaaagaaatgaagagttaaacatagggtgctggactttcct
gaaggaatggaggaggagtggatgggggcgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_72206034_72207100
seq2: B6Ng01-033P03.b_42_1106 (reverse)

seq1  ACGGACTGGGAGGCCACAGGCTAGCAGAAAGCTGAAGAATATAACAGTC-  49
      | ||||| ||||||||||||||||||||||||||||||||  ||||||| 
seq2  AGGGACT-GGAGGCCACAGGCTAGCAGAAAGCTGAAGAATTAAACAGTCA  49

seq1  ACAGTTTCCACTAAGGTAGACGAGGCCATTGCATCGGGAATGCACTGTGA  99
      |||||||| |||||||||||||||||||||||||||||||||||||||| 
seq2  ACAGTTTCAACTAAGGTAGACGAGGCCATTGCATCGGGAATGCACTGTG-  98

seq1  ATGTCAGAGTGGTTCAGGCGGGGAACTCACACCTGCACTCTTAACCGCCG  149
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATGTCAGAGTGGTTCAGGC-GGGAACTCACACCTGCACTCTTAACCGCCG  147

seq1  TTACAGCCTTTAAAGACATGCGAGTAAATGCGTCCTACTGTTCTGCGGCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGCCTTTAAAGACATGCGAGTAAATGCGTCCTACTGTTCTGCGGCA  197

seq1  CAGCTGTGACCATGGTGACAAACACACAACTTATTTTACTAATGACCAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTGACCATGGTGACAAACACACAACTTATTTTACTAATGACCAGA  247

seq1  AGAGAAAGATTATAAAATTCCAAACACAAAGAATGGAGGAGATGAACATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAGATTATAAAATTCCAAACACAAAGAATGGAGGAGATGAACATG  297

seq1  GCAAGCAGCCTGACTTTACCTGTATGAACTATATGACAGAAATATCACAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCAGCCTGACTTTACCTGTATGAACTATATGACAGAAATATCACAC  347

seq1  GTACGCCACCTTAAACCTGGACCACAATTAATTTCTGTTAGTCAAACTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACGCCACCTTAAACCTGGACCACAATTAATTTCTGTTAGTCAAACTTT  397

seq1  TGAAACAAGAAAGGCCAGTGGATGAAGAAATGTACGTATGAGGCCCCTTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACAAGAAAGGCCAGTGGATGAAGAAATGTACGTATGAGGCCCCTTG  447

seq1  TTTTCTCCCTTTCATCCTGAGCATAAATAAATAAAAATAATTAAATAAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCCCTTTCATCCTGAGCATAAATAAATAAAAATAATTAAATAAAT  497

seq1  AAGTTTAAGGAGGAAAAACTTTAAATAAATAAATAAAGTTTAAGGAGAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTAAGGAGGAAAAACTTTAAATAAATAAATAAAGTTTAAGGAGAAA  547

seq1  AGAAAACCCTTTAAATACATTAAAGTTTAAAACAAGATTTTCTTCTAGCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACCCTTTAAATACATTAAAGTTTAAAACAAGATTTTCTTCTAGCT  597

seq1  CAGAAGGCTTCCTTCAACACATTCCCAGAGACACTGGCTCAAGTCACAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGCTTCCTTCAACACATTCCCAGAGACACTGGCTCAAGTCACAGA  647

seq1  ATTGCACAGAGAAATCACCACCTCTATATTTCTTTACAGCTACATTGTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCACAGAGAAATCACCACCTCTATATTTCTTTACAGCTACATTGTTT  697

seq1  CACCACCCTGGAAGCTGTTTGCTCCTTTCCCAGAGTCCATGTCTGTGAGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCCTGGAAGCTGTTTGCTCCTTTCCCAGAGTCCATGTCTGTGAGA  747

seq1  AGTCAGAAGTGCTTAAGCACTGACTTCCAGCAAGCGATGGAGGTTCGAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGAAGTGCTTAAGCACTGACTTCCAGCAAGCGATGGAGGTTCGAGA  797

seq1  TTATGTTAGAGCCAGTAAGACTATGAAAGCAGAAGAATGGGTTTCTCTGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTAGAGCCAGTAAGACTATGAAAGCAGAAGAATGGGTTTCTCTGA  847

seq1  ACCACTTATAAAGTCTCTGACAAGATCAAGGGGTTGGTACAGAGTTAAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTTATAAAGTCTCTGACAAGATCAAGGGGTTGGTACAGAGTTAAAT  897

seq1  AAAAGCTCTCTATCACGGCAGAGAAAATCACAGCATACATACGACCATTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTCTCTATCACGGCAGAGAAAATCACAGCATACATACGACCATTG  947

seq1  GAAGAACAAGGCAGAGGCCTCTGGGTGGGTGAAGAAGCACCCCAGTGTGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAACAAGGCAGAGGCCTCTGGGTGGGTGAAGAAGCACCCCAGTGTGC  997

seq1  CCCCAGTGTGCTGCCATTACTGTGTCTACCGTGAGGTGCAGGACATGAAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGTGTGCTGCCATTACTGTGTCTACCGTGAGGTGCAGGACATGAAG  1047

seq1  AGACTGGGTAGTGAATTC  1067
      ||||||||||||||||||
seq2  AGACTGGGTAGTGAATTC  1065

seq1: chr7_72100976_72101156
seq2: B6Ng01-033P03.g_73_253

seq1  ATCACTGTTCCATGTAGCCAGCAGACATGACTCAAGAACTCTTGGAAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGTTCCATGTAGCCAGCAGACATGACTCAAGAACTCTTGGAAGGG  50

seq1  TGGCATTTGCTTAACTAGGATATGAAGGTGTATATGATGTGAATGTGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTTGCTTAACTAGGATATGAAGGTGTATATGATGTGAATGTGCAC  100

seq1  TCCAAGAAGGAAAGAAATGAAGAGTTAAACATAGGGTGCTGGACTTTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGAAGGAAAGAAATGAAGAGTTAAACATAGGGTGCTGGACTTTCCT  150

seq1  GAAGGAATGGAGGAGGAGTGGATGGGGGCGG  181
      |||||||||||||||||||||||||||||||
seq2  GAAGGAATGGAGGAGGAGTGGATGGGGGCGG  181